RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 COL15A1P39059 1388 aa11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 CICQ96RK0 1608 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 YBX3P16989 372 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 RIPK4P57078 832 aa11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 TMEM132AQ24JP5 1023 aa11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 BICDL1Q6ZP65 573 aa11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 DDX12PQ92771 950 aa11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-219ENST00000534753 UBR2Q8IWV8 1755 aa11.75□□□□□ -0.53
CCDC90B-219ENST00000534753 A0A0G2JLW4 131 aa11.75□□□□□ -0.53
CCDC90B-219ENST00000534753 GPR37O15354 613 aa11.75□□□□□ -0.53
CCDC90B-219ENST00000534753 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
CCDC90B-219ENST00000534753 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
CCDC90B-219ENST00000534753 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
CCDC90B-219ENST00000534753 SNRPA1P09661 255 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-219ENST00000534753 KRI1Q8N9T8 703 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-219ENST00000534753 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
CCDC90B-219ENST00000534753 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
CCDC90B-219ENST00000534753 LAS1LQ9Y4W2 734 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-219ENST00000534753 A0A087WZG4 1122 aa11.73□□□□□ -0.53
CCDC90B-219ENST00000534753 DDR1Q08345 913 aa11.73□□□□□ -0.53
CCDC90B-219ENST00000534753 NGEFQ8N5V2 710 aa11.73□□□□□ -0.53
CCDC90B-219ENST00000534753 SENP3-EIF4A1A0A087X0R7 540 aa11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 GRIN3BO60391 1043 aa11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 DPEP1P16444 411 aa11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 PNISRQ8TF01 805 aaKnown RBP11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 RUNDC1Q96C34 613 aa11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 TSPYL4Q9UJ04 414 aa11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
CCDC90B-219ENST00000534753 NPHP1O15259 732 aa11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 EVI5O60447 810 aa11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 OSBPP22059 807 aa11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 TM4SF1P30408 202 aa11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 IL6STP40189 918 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 NFIXQ14938 502 aa11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 BCS1LQ9Y276 419 aa11.71□□□□□ -0.53
CCDC90B-219ENST00000534753 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 SERPINB2P05120 415 aa11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 CHRNA5P30532 468 aa11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 TBC1D9BQ66K14 1250 aa11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 DZIP3Q86Y13 1208 aaKnown RBP11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 CCDC24Q8N4L8 307 aa11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 GPBP1L1Q9HC44 474 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-219ENST00000534753 ANP32CO43423 234 aa11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 MYL6BP14649 208 aa11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 TGFB2P61812 414 aa11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 CCDC184Q52MB2 194 aa11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
CCDC90B-219ENST00000534753 FAM177BA6PVY3 158 aa11.68□□□□□ -0.54
CCDC90B-219ENST00000534753 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
CCDC90B-219ENST00000534753 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-219ENST00000534753 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-219ENST00000534753 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
CCDC90B-219ENST00000534753 NBPF15Q8N660 670 aa11.68□□□□□ -0.54
CCDC90B-219ENST00000534753 APAF1O14727 1248 aa11.67□□□□□ -0.54
CCDC90B-219ENST00000534753 GIGYF1O75420 1035 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-219ENST00000534753 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
CCDC90B-219ENST00000534753 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-219ENST00000534753 SETDB2Q96T68 719 aa11.67□□□□□ -0.54
CCDC90B-219ENST00000534753 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
CCDC90B-219ENST00000534753 TBC1D12O60347 775 aa11.66□□□□□ -0.54
CCDC90B-219ENST00000534753 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
CCDC90B-219ENST00000534753 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-219ENST00000534753 PTCD2Q8WV60 388 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-219ENST00000534753 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
CCDC90B-219ENST00000534753 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
CCDC90B-219ENST00000534753 CHD4Q14839 1912 aa11.66□□□□□ -0.54
CCDC90B-219ENST00000534753 DALRD3Q5D0E6 543 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-219ENST00000534753 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
CCDC90B-219ENST00000534753 H0YIN7 160 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 TRIM66O15016 1216 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 ANXA1P04083 346 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 KCNA3P22001 575 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 FECHP22830 423 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 HLFQ16534 295 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 KRT24Q2M2I5 525 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 KIF6Q6ZMV9 814 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 NBPF5PQ86XG9 351 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 CNBD1Q8NA66 436 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 ZNF622Q969S3 477 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 AFDNP55196 1824 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 KIF13BQ9NQT8 1826 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 CARMIL3Q8ND23 1372 aa11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 GOLGB1Q14789 3259 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-219ENST00000534753 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
CCDC90B-219ENST00000534753 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms