RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
CHRDL2-209ENST00000534276 PROSER3Q2NL68 480 aa15.87■□□□□ 0.13
CHRDL2-209ENST00000534276 SUSD4Q5VX71 490 aa15.87■□□□□ 0.13
CHRDL2-209ENST00000534276 OLFM4Q6UX06 510 aa15.87■□□□□ 0.13
CHRDL2-209ENST00000534276 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
CHRDL2-209ENST00000534276 HTRA3P83110 453 aa15.86■□□□□ 0.13
CHRDL2-209ENST00000534276 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
CHRDL2-209ENST00000534276 RTKN2Q8IZC4 609 aa15.86■□□□□ 0.13
CHRDL2-209ENST00000534276 TRIM35Q9UPQ4 493 aa15.86■□□□□ 0.13
CHRDL2-209ENST00000534276 ARFGEF2Q9Y6D5 1785 aa15.86■□□□□ 0.13
CHRDL2-209ENST00000534276 CHL1O00533 1208 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 DDNO94850 711 aaPredicted RBP15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 ANXA1P04083 346 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 HOXA10P31260 410 aaPredicted RBP15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 ZNF277Q9NRM2 450 aaPredicted RBP15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 NUP98P52948 1817 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 NTSR2O95665 410 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 NEFLP07196 543 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 PARP10Q53GL7 1025 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 DUSP27Q5VZP5 1158 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 ERICH6BQ5W0A0 696 aa15.85■□□□□ 0.13
CHRDL2-209ENST00000534276 IL16Q14005 1332 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 DICER1Q9UPY3 1922 aaKnown RBP15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 WDR90Q96KV7 1748 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 CACNA1SQ13698 1873 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 KRT24Q2M2I5 525 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 PPP1R42Q7Z4L9 355 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 NECTIN2Q92692 538 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 RPGRQ92834 1020 aaKnown RBP15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 CDCA7LQ96GN5 454 aa15.84■□□□□ 0.13
CHRDL2-209ENST00000534276 CC2D2BQ6DHV5 1058 aa15.83■□□□□ 0.12
CHRDL2-209ENST00000534276 COPS6Q7L5N1 327 aa15.83■□□□□ 0.12
CHRDL2-209ENST00000534276 SYNE4Q8N205 404 aa15.83■□□□□ 0.12
CHRDL2-209ENST00000534276 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
CHRDL2-209ENST00000534276 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
CHRDL2-209ENST00000534276 CALD1Q05682 793 aaKnown RBP15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 C3orf67Q6ZVT6 689 aa15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 XAGE3Q8WTP9 111 aa15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 KLRG1Q96E93 195 aa15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 L3MBTL3Q96JM7 780 aaPredicted RBP15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 UTP14AQ9BVJ6 771 aaKnown RBP15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 DDX21Q9NR30 783 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHRDL2-209ENST00000534276 SNED1Q8TER0 1413 aa15.81■□□□□ 0.12
CHRDL2-209ENST00000534276 IARSP41252 1262 aaKnown RBP15.81■□□□□ 0.12
CHRDL2-209ENST00000534276 AIMP1Q12904 312 aaKnown RBP15.81■□□□□ 0.12
CHRDL2-209ENST00000534276 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
CHRDL2-209ENST00000534276 PSMD1Q99460 953 aa15.81■□□□□ 0.12
CHRDL2-209ENST00000534276 HSP90AB3PQ58FF7 597 aa15.8■□□□□ 0.12
CHRDL2-209ENST00000534276 RBM17Q96I25 401 aaKnown RBP15.8■□□□□ 0.12
CHRDL2-209ENST00000534276 NLRP3Q96P20 1036 aa15.8■□□□□ 0.12
CHRDL2-209ENST00000534276 MYH16Q9H6N6 1097 aa15.8■□□□□ 0.12
CHRDL2-209ENST00000534276 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
CHRDL2-209ENST00000534276 ZNF541Q9H0D2 1346 aa15.8■□□□□ 0.12
CHRDL2-209ENST00000534276 IQCA1LA6NCM1 817 aa15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 HOXB7P09629 217 aa15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 NLRP10Q86W26 655 aa15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 PIAS4Q8N2W9 510 aaPredicted RBP15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 JMYQ8N9B5 988 aa15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 CHPF2Q9P2E5 772 aa15.79■□□□□ 0.12
CHRDL2-209ENST00000534276 FZD9O00144 591 aa15.78■□□□□ 0.12
CHRDL2-209ENST00000534276 POTEIP0CG38 1075 aa15.78■□□□□ 0.12
CHRDL2-209ENST00000534276 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
CHRDL2-209ENST00000534276 TCIRG1Q13488 830 aa15.78■□□□□ 0.12
CHRDL2-209ENST00000534276 GRIPAP1Q4V328 841 aa15.78■□□□□ 0.12
CHRDL2-209ENST00000534276 HDGFL1Q5TGJ6 251 aa15.78■□□□□ 0.12
CHRDL2-209ENST00000534276 PPEF1O14829 653 aaPredicted RBP15.77■□□□□ 0.12
CHRDL2-209ENST00000534276 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
CHRDL2-209ENST00000534276 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
CHRDL2-209ENST00000534276 TAF1DQ9H5J8 278 aaPredicted RBP15.77■□□□□ 0.12
CHRDL2-209ENST00000534276 MBIPQ9NS73 344 aa15.77■□□□□ 0.12
CHRDL2-209ENST00000534276 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.11
CHRDL2-209ENST00000534276 CT47B1P0C2W7 299 aaPredicted RBP15.77■□□□□ 0.11
CHRDL2-209ENST00000534276 ZNF853P0CG23 659 aa15.77■□□□□ 0.11
CHRDL2-209ENST00000534276 DBF4Q9UBU7 674 aaPredicted RBP15.77■□□□□ 0.11
CHRDL2-209ENST00000534276 HCLS1P14317 486 aaPredicted RBP15.76■□□□□ 0.11
CHRDL2-209ENST00000534276 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
CHRDL2-209ENST00000534276 TRMT112Q9UI30 125 aaKnown RBP15.76■□□□□ 0.11
CHRDL2-209ENST00000534276 ANKRD13DQ6ZTN6 518 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 LDHDQ86WU2 507 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 GPC2Q8N158 579 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 PLBD2Q8NHP8 589 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 HACL1Q9UJ83 578 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 ATP6V0A2Q9Y487 856 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 ABCC4O15439 1325 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 SH3TC1Q8TE82 1336 aa15.75■□□□□ 0.11
CHRDL2-209ENST00000534276 EPHX2P34913 555 aa15.74■□□□□ 0.11
CHRDL2-209ENST00000534276 TMX4Q9H1E5 349 aaPredicted RBP15.74■□□□□ 0.11
CHRDL2-209ENST00000534276 IFT57Q9NWB7 429 aa15.74■□□□□ 0.11
CHRDL2-209ENST00000534276 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
CHRDL2-209ENST00000534276 BBOX1O75936 387 aa15.73■□□□□ 0.11
CHRDL2-209ENST00000534276 EIF6P56537 245 aaKnown RBP15.73■□□□□ 0.11
CHRDL2-209ENST00000534276 EAPPQ56P03 285 aaPredicted RBP15.73■□□□□ 0.11
CHRDL2-209ENST00000534276 ISCA1Q9BUE6 129 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms