RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 NTSR2O95665 410 aa23.81■■□□□ 1.4
UBXN1-216ENST00000533908 EPHX2P34913 555 aa23.81■■□□□ 1.4
UBXN1-216ENST00000533908 GIGYF2Q6Y7W6 1299 aaKnown RBP23.81■■□□□ 1.4
UBXN1-216ENST00000533908 TNS4Q8IZW8 715 aa23.81■■□□□ 1.4
UBXN1-216ENST00000533908 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
UBXN1-216ENST00000533908 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
UBXN1-216ENST00000533908 ANXA1P04083 346 aa23.8■■□□□ 1.4
UBXN1-216ENST00000533908 PROSER3Q2NL68 480 aa23.8■■□□□ 1.4
UBXN1-216ENST00000533908 PNNQ9H307 717 aaKnown RBP23.8■■□□□ 1.4
UBXN1-216ENST00000533908 TSPYL4Q9UJ04 414 aa23.8■■□□□ 1.4
UBXN1-216ENST00000533908 IBTKQ9P2D0 1353 aaPredicted RBP23.79■■□□□ 1.4
UBXN1-216ENST00000533908 RIC1Q4ADV7 1423 aa23.79■■□□□ 1.4
UBXN1-216ENST00000533908 EIF2S2P20042 333 aaKnown RBP23.79■■□□□ 1.4
UBXN1-216ENST00000533908 RIPK4P57078 832 aa23.79■■□□□ 1.4
UBXN1-216ENST00000533908 RPGRQ92834 1020 aaKnown RBP23.79■■□□□ 1.4
UBXN1-216ENST00000533908 ERBB4Q15303 1308 aa23.79■■□□□ 1.4
UBXN1-216ENST00000533908 ADAMTSL1Q8N6G6 1762 aa23.78■■□□□ 1.4
UBXN1-216ENST00000533908 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
UBXN1-216ENST00000533908 CAPN15O75808 1086 aa23.78■■□□□ 1.4
UBXN1-216ENST00000533908 CC2D2BQ6DHV5 1058 aa23.78■■□□□ 1.4
UBXN1-216ENST00000533908 GPC2Q8N158 579 aa23.78■■□□□ 1.4
UBXN1-216ENST00000533908 CRAMP1Q96RY5 1269 aa23.78■■□□□ 1.4
UBXN1-216ENST00000533908 CLEC11AQ9Y240 323 aa23.78■■□□□ 1.4
UBXN1-216ENST00000533908 CNTNAP1P78357 1384 aa23.77■■□□□ 1.4
UBXN1-216ENST00000533908 TMPOP42166 694 aaKnown RBP23.76■■□□□ 1.39
UBXN1-216ENST00000533908 MAP1SQ66K74 1059 aaPredicted RBP23.76■■□□□ 1.39
UBXN1-216ENST00000533908 JDP2Q8WYK2 163 aa23.76■■□□□ 1.39
UBXN1-216ENST00000533908 RBM17Q96I25 401 aaKnown RBP23.76■■□□□ 1.39
UBXN1-216ENST00000533908 SLC10A5Q5PT55 438 aa23.75■■□□□ 1.39
UBXN1-216ENST00000533908 CNTROBQ8N137 903 aa23.75■■□□□ 1.39
UBXN1-216ENST00000533908 GJA3Q9Y6H8 435 aa23.75■■□□□ 1.39
UBXN1-216ENST00000533908 TMEM88BA6NKF7 163 aa23.74■■□□□ 1.39
UBXN1-216ENST00000533908 PPEF1O14829 653 aaPredicted RBP23.74■■□□□ 1.39
UBXN1-216ENST00000533908 VEGFBP49765 207 aa23.74■■□□□ 1.39
UBXN1-216ENST00000533908 PPP1R42Q7Z4L9 355 aa23.74■■□□□ 1.39
UBXN1-216ENST00000533908 PNMA8AQ86V59 439 aaPredicted RBP23.74■■□□□ 1.39
UBXN1-216ENST00000533908 PARP10Q53GL7 1025 aa23.73■■□□□ 1.39
UBXN1-216ENST00000533908 NECTIN2Q92692 538 aa23.73■■□□□ 1.39
UBXN1-216ENST00000533908 LTBP1Q14766 1721 aa23.73■■□□□ 1.39
UBXN1-216ENST00000533908 KRT24Q2M2I5 525 aa23.72■■□□□ 1.39
UBXN1-216ENST00000533908 COPS6Q7L5N1 327 aa23.72■■□□□ 1.39
UBXN1-216ENST00000533908 LARGE2Q8N3Y3 721 aa23.72■■□□□ 1.39
UBXN1-216ENST00000533908 NLRP3Q96P20 1036 aa23.72■■□□□ 1.39
UBXN1-216ENST00000533908 UTP14AQ9BVJ6 771 aaKnown RBP23.72■■□□□ 1.39
UBXN1-216ENST00000533908 BABAM1Q9NWV8 329 aa23.72■■□□□ 1.39
UBXN1-216ENST00000533908 FOXN1O15353 648 aa23.71■■□□□ 1.39
UBXN1-216ENST00000533908 EPS15P42566 896 aa23.71■■□□□ 1.39
UBXN1-216ENST00000533908 SCNN1DP51172 638 aa23.71■■□□□ 1.39
UBXN1-216ENST00000533908 EIF6P56537 245 aaKnown RBP23.71■■□□□ 1.39
UBXN1-216ENST00000533908 RALBP1Q15311 655 aa23.71■■□□□ 1.39
UBXN1-216ENST00000533908 FMR1Q06787 632 aaKnown RBP eCLIP23.7■■□□□ 1.38
UBXN1-216ENST00000533908 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.38
UBXN1-216ENST00000533908 CCDC146Q8IYE0 955 aa23.7■■□□□ 1.38
UBXN1-216ENST00000533908 ATP6V0A2Q9Y487 856 aa23.7■■□□□ 1.38
UBXN1-216ENST00000533908 AIMP1Q12904 312 aaKnown RBP23.69■■□□□ 1.38
UBXN1-216ENST00000533908 XAGE3Q8WTP9 111 aa23.69■■□□□ 1.38
UBXN1-216ENST00000533908 ABCC4O15439 1325 aa23.68■■□□□ 1.38
UBXN1-216ENST00000533908 HCLS1P14317 486 aaPredicted RBP23.68■■□□□ 1.38
UBXN1-216ENST00000533908 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
UBXN1-216ENST00000533908 NLRP10Q86W26 655 aa23.68■■□□□ 1.38
UBXN1-216ENST00000533908 CHL1O00533 1208 aa23.67■■□□□ 1.38
UBXN1-216ENST00000533908 AOC3Q16853 763 aa23.67■■□□□ 1.38
UBXN1-216ENST00000533908 ZNF428Q96B54 188 aa23.67■■□□□ 1.38
UBXN1-216ENST00000533908 TRIM35Q9UPQ4 493 aa23.67■■□□□ 1.38
UBXN1-216ENST00000533908 RASSF10A6NK89 507 aa23.66■■□□□ 1.38
UBXN1-216ENST00000533908 PPIP5K2O43314 1243 aa23.66■■□□□ 1.38
UBXN1-216ENST00000533908 DDX10Q13206 875 aaKnown RBP23.66■■□□□ 1.38
UBXN1-216ENST00000533908 TCIRG1Q13488 830 aa23.66■■□□□ 1.38
UBXN1-216ENST00000533908 LMOD3Q0VAK6 560 aa23.65■■□□□ 1.38
UBXN1-216ENST00000533908 NIM1KQ8IY84 436 aa23.65■■□□□ 1.38
UBXN1-216ENST00000533908 DDX21Q9NR30 783 aaKnown RBP eCLIP23.65■■□□□ 1.38
UBXN1-216ENST00000533908 LMOD1P29536 600 aaPredicted RBP23.64■■□□□ 1.37
UBXN1-216ENST00000533908 CXCL9Q07325 125 aa23.64■■□□□ 1.37
UBXN1-216ENST00000533908 DEFB115Q30KQ5 88 aa23.64■■□□□ 1.37
UBXN1-216ENST00000533908 RTFDC1Q9BY42 306 aaPredicted RBP23.64■■□□□ 1.37
UBXN1-216ENST00000533908 WBP1LQ9NX94 342 aa23.64■■□□□ 1.37
UBXN1-216ENST00000533908 LAMB2P55268 1798 aa23.63■■□□□ 1.37
UBXN1-216ENST00000533908 BBOX1O75936 387 aa23.63■■□□□ 1.37
UBXN1-216ENST00000533908 SP8Q8IXZ3 490 aa23.63■■□□□ 1.37
UBXN1-216ENST00000533908 TRMT112Q9UI30 125 aaKnown RBP23.63■■□□□ 1.37
UBXN1-216ENST00000533908 TRAF5O00463 557 aa23.62■■□□□ 1.37
UBXN1-216ENST00000533908 HSP90AB3PQ58FF7 597 aa23.62■■□□□ 1.37
UBXN1-216ENST00000533908 VPS33BQ9H267 617 aa23.62■■□□□ 1.37
UBXN1-216ENST00000533908 CHPF2Q9P2E5 772 aa23.62■■□□□ 1.37
UBXN1-216ENST00000533908 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
UBXN1-216ENST00000533908 ANKRD36CQ5JPF3 1778 aa23.62■■□□□ 1.37
UBXN1-216ENST00000533908 CST9Q5W186 159 aa23.61■■□□□ 1.37
UBXN1-216ENST00000533908 USP50Q70EL3 339 aaPredicted RBP23.61■■□□□ 1.37
UBXN1-216ENST00000533908 PRDM10Q9NQV6 1147 aa23.61■■□□□ 1.37
UBXN1-216ENST00000533908 GPRC5DQ9NZD1 345 aa23.61■■□□□ 1.37
UBXN1-216ENST00000533908 ZNRF3Q9ULT6 936 aa23.61■■□□□ 1.37
UBXN1-216ENST00000533908 TAF1P21675 1872 aa23.61■■□□□ 1.37
UBXN1-216ENST00000533908 MYBBP1AQ9BQG0 1328 aaKnown RBP23.6■■□□□ 1.37
UBXN1-216ENST00000533908 MPNDQ8N594 471 aa23.6■■□□□ 1.37
UBXN1-216ENST00000533908 RUNDC1Q96C34 613 aa23.6■■□□□ 1.37
UBXN1-216ENST00000533908 TMX4Q9H1E5 349 aaPredicted RBP23.6■■□□□ 1.37
UBXN1-216ENST00000533908 ABT1Q9ULW3 272 aaKnown RBP23.6■■□□□ 1.37
UBXN1-216ENST00000533908 ADAMTS8Q9UP79 889 aa23.6■■□□□ 1.37
UBXN1-216ENST00000533908 SH3TC1Q8TE82 1336 aa23.59■■□□□ 1.37
UBXN1-216ENST00000533908 WDR33Q9C0J8 1336 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms