RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 NECTIN2Q92692 538 aa24.06■■□□□ 1.44
HIF3A-216ENST00000533789 POTECB2RU33 542 aa24.05■■□□□ 1.44
HIF3A-216ENST00000533789 RPGRQ92834 1020 aaKnown RBP24.05■■□□□ 1.44
HIF3A-216ENST00000533789 HOXB7P09629 217 aa24.04■■□□□ 1.44
HIF3A-216ENST00000533789 DDX21Q9NR30 783 aaKnown RBP eCLIP24.04■■□□□ 1.44
HIF3A-216ENST00000533789 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
HIF3A-216ENST00000533789 HOXA10P31260 410 aaPredicted RBP24.03■■□□□ 1.44
HIF3A-216ENST00000533789 COPS6Q7L5N1 327 aa24.03■■□□□ 1.44
HIF3A-216ENST00000533789 XAGE3Q8WTP9 111 aa24.03■■□□□ 1.44
HIF3A-216ENST00000533789 CFAP44Q96MT7 982 aa24.03■■□□□ 1.44
HIF3A-216ENST00000533789 ZNF277Q9NRM2 450 aaPredicted RBP24.03■■□□□ 1.44
HIF3A-216ENST00000533789 LRRC37AA6NMS7 1700 aa24.02■■□□□ 1.44
HIF3A-216ENST00000533789 ADAMTSL1Q8N6G6 1762 aa24.02■■□□□ 1.44
HIF3A-216ENST00000533789 HSP90AB3PQ58FF7 597 aa24.02■■□□□ 1.44
HIF3A-216ENST00000533789 DDNO94850 711 aaPredicted RBP24.01■■□□□ 1.43
HIF3A-216ENST00000533789 AIMP1Q12904 312 aaKnown RBP24.01■■□□□ 1.43
HIF3A-216ENST00000533789 HDGFL1Q5TGJ6 251 aa24.01■■□□□ 1.43
HIF3A-216ENST00000533789 DNAJC5GQ8N7S2 189 aa24.01■■□□□ 1.43
HIF3A-216ENST00000533789 UTP14AQ9BVJ6 771 aaKnown RBP24.01■■□□□ 1.43
HIF3A-216ENST00000533789 CHPF2Q9P2E5 772 aa24.01■■□□□ 1.43
HIF3A-216ENST00000533789 COL4A5P29400 1685 aa24■■□□□ 1.43
HIF3A-216ENST00000533789 CC2D2BQ6DHV5 1058 aa24■■□□□ 1.43
HIF3A-216ENST00000533789 RBM17Q96I25 401 aaKnown RBP24■■□□□ 1.43
HIF3A-216ENST00000533789 CRAMP1Q96RY5 1269 aa24■■□□□ 1.43
HIF3A-216ENST00000533789 PSMD1Q99460 953 aa24■■□□□ 1.43
HIF3A-216ENST00000533789 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
HIF3A-216ENST00000533789 C3orf67Q6ZVT6 689 aa23.99■■□□□ 1.43
HIF3A-216ENST00000533789 MBIPQ9NS73 344 aa23.99■■□□□ 1.43
HIF3A-216ENST00000533789 CACNA1FO60840 1977 aa23.99■■□□□ 1.43
HIF3A-216ENST00000533789 APAF1O14727 1248 aa23.98■■□□□ 1.43
HIF3A-216ENST00000533789 SLC10A5Q5PT55 438 aa23.98■■□□□ 1.43
HIF3A-216ENST00000533789 SYNE4Q8N205 404 aa23.98■■□□□ 1.43
HIF3A-216ENST00000533789 L3MBTL3Q96JM7 780 aaPredicted RBP23.98■■□□□ 1.43
HIF3A-216ENST00000533789 NLRP3Q96P20 1036 aa23.98■■□□□ 1.43
HIF3A-216ENST00000533789 ZNF541Q9H0D2 1346 aa23.98■■□□□ 1.43
HIF3A-216ENST00000533789 PPEF1O14829 653 aaPredicted RBP23.97■■□□□ 1.43
HIF3A-216ENST00000533789 ZNF853P0CG23 659 aa23.97■■□□□ 1.43
HIF3A-216ENST00000533789 HTRA3P83110 453 aa23.97■■□□□ 1.43
HIF3A-216ENST00000533789 TCIRG1Q13488 830 aa23.97■■□□□ 1.43
HIF3A-216ENST00000533789 GRIPAP1Q4V328 841 aa23.97■■□□□ 1.43
HIF3A-216ENST00000533789 NLRP10Q86W26 655 aa23.97■■□□□ 1.43
HIF3A-216ENST00000533789 DBF4Q9UBU7 674 aaPredicted RBP23.97■■□□□ 1.43
HIF3A-216ENST00000533789 MYH3P11055 1940 aa23.96■■□□□ 1.43
HIF3A-216ENST00000533789 IQCA1LA6NCM1 817 aa23.96■■□□□ 1.43
HIF3A-216ENST00000533789 CALD1Q05682 793 aaKnown RBP23.96■■□□□ 1.43
HIF3A-216ENST00000533789 DUSP27Q5VZP5 1158 aa23.96■■□□□ 1.43
HIF3A-216ENST00000533789 IFT57Q9NWB7 429 aa23.96■■□□□ 1.43
HIF3A-216ENST00000533789 PLBD2Q8NHP8 589 aa23.95■■□□□ 1.42
HIF3A-216ENST00000533789 ABCC4O15439 1325 aa23.94■■□□□ 1.42
HIF3A-216ENST00000533789 LTBP1Q14766 1721 aa23.94■■□□□ 1.42
HIF3A-216ENST00000533789 FZD9O00144 591 aa23.94■■□□□ 1.42
HIF3A-216ENST00000533789 ZEB1P37275 1124 aaPredicted RBP23.94■■□□□ 1.42
HIF3A-216ENST00000533789 GNAI1P63096 354 aa23.94■■□□□ 1.42
HIF3A-216ENST00000533789 KLRG1Q96E93 195 aa23.94■■□□□ 1.42
HIF3A-216ENST00000533789 SH3TC1Q8TE82 1336 aa23.93■■□□□ 1.42
HIF3A-216ENST00000533789 HYPKQ9NX55 129 aa23.93■■□□□ 1.42
HIF3A-216ENST00000533789 TRMT112Q9UI30 125 aaKnown RBP23.93■■□□□ 1.42
HIF3A-216ENST00000533789 CHADLQ6NUI6 762 aa23.92■■□□□ 1.42
HIF3A-216ENST00000533789 ANKRD13DQ6ZTN6 518 aa23.92■■□□□ 1.42
HIF3A-216ENST00000533789 SLC51AQ86UW1 340 aa23.92■■□□□ 1.42
HIF3A-216ENST00000533789 JDP2Q8WYK2 163 aa23.92■■□□□ 1.42
HIF3A-216ENST00000533789 POTEIP0CG38 1075 aa23.91■■□□□ 1.42
HIF3A-216ENST00000533789 POTEJP0CG39 1038 aa23.91■■□□□ 1.42
HIF3A-216ENST00000533789 PCNTO95613 3336 aa23.9■■□□□ 1.42
HIF3A-216ENST00000533789 TRPM7Q96QT4 1865 aa23.9■■□□□ 1.42
HIF3A-216ENST00000533789 TCERG1O14776 1098 aaKnown RBP23.9■■□□□ 1.42
HIF3A-216ENST00000533789 HCLS1P14317 486 aaPredicted RBP23.9■■□□□ 1.42
HIF3A-216ENST00000533789 TAF1DQ9H5J8 278 aaPredicted RBP23.9■■□□□ 1.42
HIF3A-216ENST00000533789 ATP6V0A2Q9Y487 856 aa23.9■■□□□ 1.42
HIF3A-216ENST00000533789 GPC2Q8N158 579 aa23.89■■□□□ 1.41
HIF3A-216ENST00000533789 ISCA1Q9BUE6 129 aa23.89■■□□□ 1.41
HIF3A-216ENST00000533789 TMX4Q9H1E5 349 aaPredicted RBP23.89■■□□□ 1.41
HIF3A-216ENST00000533789 DUOX1Q9NRD9 1551 aa23.89■■□□□ 1.41
HIF3A-216ENST00000533789 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
HIF3A-216ENST00000533789 LDHDQ86WU2 507 aa23.88■■□□□ 1.41
HIF3A-216ENST00000533789 JMYQ8N9B5 988 aa23.88■■□□□ 1.41
HIF3A-216ENST00000533789 HACL1Q9UJ83 578 aa23.88■■□□□ 1.41
HIF3A-216ENST00000533789 SPEF2Q9C093 1822 aa23.87■■□□□ 1.41
HIF3A-216ENST00000533789 COL4A1P02462 1669 aa23.87■■□□□ 1.41
HIF3A-216ENST00000533789 LARGE2Q8N3Y3 721 aa23.87■■□□□ 1.41
HIF3A-216ENST00000533789 EIF6P56537 245 aaKnown RBP23.86■■□□□ 1.41
HIF3A-216ENST00000533789 DDX46Q7L014 1031 aaKnown RBP23.86■■□□□ 1.41
HIF3A-216ENST00000533789 ATP5J2-PTCD1G3V325 749 aa23.85■■□□□ 1.41
HIF3A-216ENST00000533789 BBOX1O75936 387 aa23.85■■□□□ 1.41
HIF3A-216ENST00000533789 GRAPQ13588 217 aa23.85■■□□□ 1.41
HIF3A-216ENST00000533789 GRAPLQ8TC17 118 aaPredicted RBP23.85■■□□□ 1.41
HIF3A-216ENST00000533789 ELL2O00472 640 aaPredicted RBP23.84■■□□□ 1.41
HIF3A-216ENST00000533789 EPHX2P34913 555 aa23.84■■□□□ 1.41
HIF3A-216ENST00000533789 GOLGA2Q08379 1002 aa23.84■■□□□ 1.41
HIF3A-216ENST00000533789 SP8Q8IXZ3 490 aa23.84■■□□□ 1.41
HIF3A-216ENST00000533789 ZNF428Q96B54 188 aa23.84■■□□□ 1.41
HIF3A-216ENST00000533789 RTFDC1Q9BY42 306 aaPredicted RBP23.84■■□□□ 1.41
HIF3A-216ENST00000533789 VPS33BQ9H267 617 aa23.84■■□□□ 1.41
HIF3A-216ENST00000533789 PPIP5K2O43314 1243 aa23.83■■□□□ 1.41
HIF3A-216ENST00000533789 TRIM28Q13263 835 aaKnown RBP23.83■■□□□ 1.41
HIF3A-216ENST00000533789 EAPPQ56P03 285 aaPredicted RBP23.83■■□□□ 1.41
HIF3A-216ENST00000533789 NIM1KQ8IY84 436 aa23.83■■□□□ 1.41
HIF3A-216ENST00000533789 C8orf58Q8NAV2 365 aa23.83■■□□□ 1.41
HIF3A-216ENST00000533789 SUPT20HQ8NEM7 779 aa23.83■■□□□ 1.41
HIF3A-216ENST00000533789 FAM89AQ96GI7 184 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms