RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, human

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAV3-215	ENST00000533398	NEFM	P07197	916 aa		11.96	□□□□□ -0.49
VAV3-215	ENST00000533398	NPR1	P16066	1061 aa		11.96	□□□□□ -0.49
VAV3-215	ENST00000533398	CLCN6	P51797	869 aa		11.96	□□□□□ -0.49
VAV3-215	ENST00000533398	EIF4A1	P60842	406 aa	Known RBP	11.96	□□□□□ -0.49
VAV3-215	ENST00000533398	NFE2L2	Q16236	605 aa		11.96	□□□□□ -0.49
VAV3-215	ENST00000533398	TPTE2	Q6XPS3	522 aa		11.96	□□□□□ -0.49
VAV3-215	ENST00000533398	JMY	Q8N9B5	988 aa		11.96	□□□□□ -0.49
VAV3-215	ENST00000533398	ZNF541	Q9H0D2	1346 aa		11.95	□□□□□ -0.5
VAV3-215	ENST00000533398	GPT	P24298	496 aa		11.95	□□□□□ -0.5
VAV3-215	ENST00000533398	GTF2E1	P29083	439 aa	Predicted RBP	11.95	□□□□□ -0.5
VAV3-215	ENST00000533398	CCDC93	Q567U6	631 aa		11.95	□□□□□ -0.5
VAV3-215	ENST00000533398	ZBTB3	Q9H5J0	574 aa		11.95	□□□□□ -0.5
VAV3-215	ENST00000533398	MAPK8IP3	Q9UPT6	1336 aa		11.94	□□□□□ -0.5
VAV3-215	ENST00000533398	KLRG2	A4D1S0	409 aa	Predicted RBP	11.94	□□□□□ -0.5
VAV3-215	ENST00000533398	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.94	□□□□□ -0.5
VAV3-215	ENST00000533398	SOGA3	Q5TF21	947 aa		11.94	□□□□□ -0.5
VAV3-215	ENST00000533398	MAP3K15	Q6ZN16	1313 aa		11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	UBN2	Q6ZU65	1347 aa		11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	KIF6	Q6ZMV9	814 aa		11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	PNISR	Q8TF01	805 aa	Known RBP	11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	DCBLD2	Q96PD2	775 aa		11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	SCN4A	P35499	1836 aa		11.93	□□□□□ -0.5
VAV3-215	ENST00000533398	COL4A5	P29400	1685 aa		11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	TCERG1	O14776	1098 aa	Known RBP	11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	ANXA1	P04083	346 aa		11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	DDX10	Q13206	875 aa	Known RBP	11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	SUSD4	Q5VX71	490 aa		11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	C3orf67	Q6ZVT6	689 aa		11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	SYNE4	Q8N205	404 aa		11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	NECTIN2	Q92692	538 aa		11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	CREBZF	Q9NS37	354 aa		11.92	□□□□□ -0.5
VAV3-215	ENST00000533398	ERVV-1	B6SEH8	477 aa		11.91	□□□□□ -0.5
VAV3-215	ENST00000533398	EIF2S2	P20042	333 aa	Known RBP	11.91	□□□□□ -0.5
VAV3-215	ENST00000533398	PROSER3	Q2NL68	480 aa		11.91	□□□□□ -0.5
VAV3-215	ENST00000533398	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.91	□□□□□ -0.5
VAV3-215	ENST00000533398	MKRN1	Q9UHC7	482 aa	Known RBP	11.91	□□□□□ -0.5
VAV3-215	ENST00000533398	TSPYL4	Q9UJ04	414 aa		11.91	□□□□□ -0.5
VAV3-215	ENST00000533398	SNED1	Q8TER0	1413 aa		11.91	□□□□□ -0.5
VAV3-215	ENST00000533398	RGL2	O15211	777 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	HSPA1A	P0DMV8	641 aa	Known RBP	11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	HSPA1B	P0DMV9	641 aa	Known RBP	11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	ALDH1B1	P30837	517 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	IARS	P41252	1262 aa	Known RBP	11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	RIPK4	P57078	832 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	CRY2	Q49AN0	593 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	EAPP	Q56P03	285 aa	Predicted RBP	11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	CCDC146	Q8IYE0	955 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	RTKN2	Q8IZC4	609 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	ZNF579	Q8NAF0	562 aa	Known RBP	11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	ZNF428	Q96B54	188 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	NYX	Q9GZU5	481 aa		11.9	□□□□□ -0.5
VAV3-215	ENST00000533398	LAMB2	P55268	1798 aa		11.9	□□□□□ -0.51
VAV3-215	ENST00000533398	ANKRD36C	Q5JPF3	1778 aa		11.9	□□□□□ -0.51
VAV3-215	ENST00000533398	RNF123	Q5XPI4	1314 aa		11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	NTSR2	O95665	410 aa		11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	PDIA6	Q15084	440 aa		11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	NEUROD2	Q15784	382 aa		11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	ZNF34	Q8IZ26	560 aa		11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	RPGR	Q92834	1020 aa	Known RBP	11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	ADAMTSL1	Q8N6G6	1762 aa		11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	LTBP1	Q14766	1721 aa		11.89	□□□□□ -0.51
VAV3-215	ENST00000533398	IQCA1L	A6NCM1	817 aa		11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	KRT24	Q2M2I5	525 aa		11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	LRP10	Q7Z4F1	713 aa		11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	LDHD	Q86WU2	507 aa		11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	PNN	Q9H307	717 aa	Known RBP	11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	GJA3	Q9Y6H8	435 aa		11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	TAF1	P21675	1872 aa		11.88	□□□□□ -0.51
VAV3-215	ENST00000533398	FZD9	O00144	591 aa		11.87	□□□□□ -0.51
VAV3-215	ENST00000533398	EPHX2	P34913	555 aa		11.87	□□□□□ -0.51
VAV3-215	ENST00000533398	TMPO	P42166	694 aa	Known RBP	11.87	□□□□□ -0.51
VAV3-215	ENST00000533398	AIMP1	Q12904	312 aa	Known RBP	11.87	□□□□□ -0.51
VAV3-215	ENST00000533398	HACL1	Q9UJ83	578 aa		11.87	□□□□□ -0.51
VAV3-215	ENST00000533398	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.87	□□□□□ -0.51
VAV3-215	ENST00000533398	PASK	Q96RG2	1323 aa		11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	RIC1	Q4ADV7	1423 aa		11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	PPEF1	O14829	653 aa	Predicted RBP	11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	ITGBL1	O95965	494 aa	Predicted RBP	11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	HOXA10	P31260	410 aa	Predicted RBP	11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	MAP1S	Q66K74	1059 aa	Predicted RBP	11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	TNS4	Q8IZW8	715 aa		11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	RBM17	Q96I25	401 aa	Known RBP	11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	PSMD1	Q99460	953 aa		11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	LAS1L	Q9Y4W2	734 aa	Known RBP	11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	ERBB4	Q15303	1308 aa		11.86	□□□□□ -0.51
VAV3-215	ENST00000533398	RALBP1	Q15311	655 aa		11.85	□□□□□ -0.51
VAV3-215	ENST00000533398	COPS6	Q7L5N1	327 aa		11.85	□□□□□ -0.51
VAV3-215	ENST00000533398	PPP1R42	Q7Z4L9	355 aa		11.85	□□□□□ -0.51
VAV3-215	ENST00000533398	XAGE3	Q8WTP9	111 aa		11.85	□□□□□ -0.51
VAV3-215	ENST00000533398	JDP2	Q8WYK2	163 aa		11.85	□□□□□ -0.51
VAV3-215	ENST00000533398	HCLS1	P14317	486 aa	Predicted RBP	11.84	□□□□□ -0.51
VAV3-215	ENST00000533398	EIF6	P56537	245 aa	Known RBP	11.84	□□□□□ -0.51
VAV3-215	ENST00000533398	FMR1	Q06787	632 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
VAV3-215	ENST00000533398	GPC2	Q8N158	579 aa		11.84	□□□□□ -0.51
VAV3-215	ENST00000533398	LARGE2	Q8N3Y3	721 aa		11.84	□□□□□ -0.51
VAV3-215	ENST00000533398	CRAMP1	Q96RY5	1269 aa		11.84	□□□□□ -0.51

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