RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	FIGNL1	Q6PIW4	674 aa		6.19	□□□□□ -1.42
LMO7-223	ENST00000533299	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.19	□□□□□ -1.42
LMO7-223	ENST00000533299	TMEM214	Q6NUQ4	689 aa	Known RBP	6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	SLC51A	Q86UW1	340 aa		6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	TSEN2	Q8NCE0	465 aa	Known RBP	6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	CLP1	Q92989	425 aa	Known RBP	6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	TRAIP	Q9BWF2	469 aa		6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	PRDM6	Q9NQX0	595 aa		6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	TMEM88B	A6NKF7	163 aa		6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	MBTPS1	Q14703	1052 aa		6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	MTFR1	Q15390	333 aa		6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	GNAS	Q5JWF2	1037 aa		6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
LMO7-223	ENST00000533299	PATL2	C9JE40	543 aa	Known RBP	6.17	□□□□□ -1.42
LMO7-223	ENST00000533299	CDK2AP1	O14519	115 aa		6.17	□□□□□ -1.42
LMO7-223	ENST00000533299	STAU1	O95793	577 aa	Known RBP	6.17	□□□□□ -1.42
LMO7-223	ENST00000533299	TNS4	Q8IZW8	715 aa		6.17	□□□□□ -1.42
LMO7-223	ENST00000533299	TP53INP1	Q96A56	240 aa		6.17	□□□□□ -1.42
LMO7-223	ENST00000533299	CRISPLD1	Q9H336	500 aa		6.17	□□□□□ -1.42
LMO7-223	ENST00000533299	RUBCNL	Q9H714	662 aa		6.17	□□□□□ -1.42
LMO7-223	ENST00000533299	NRG1	Q02297	640 aa	Predicted RBP	6.16	□□□□□ -1.42
LMO7-223	ENST00000533299	VTI1A	Q96AJ9	217 aa		6.16	□□□□□ -1.42
LMO7-223	ENST00000533299	SCHIP1	Q9P0W5	487 aa	Predicted RBP	6.16	□□□□□ -1.42
LMO7-223	ENST00000533299	MTMR7	Q9Y216	660 aa		6.16	□□□□□ -1.42
LMO7-223	ENST00000533299	HRH3	Q9Y5N1	445 aa		6.16	□□□□□ -1.42
LMO7-223	ENST00000533299	IGFBP4	P22692	258 aa		6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	MSX1	P28360	303 aa		6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	PSMA6	P60900	246 aa	Known RBP	6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	LCE4A	Q5TA78	99 aa		6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	PPARGC1B	Q86YN6	1023 aa	Known RBP	6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	RHBDD1	Q8TEB9	315 aa		6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	NIFK	Q9BYG3	293 aa	Known RBP	6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	PCDHGC4	Q9Y5F7	938 aa		6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	ATAD2	Q6PL18	1390 aa		6.15	□□□□□ -1.42
LMO7-223	ENST00000533299	BRD1	O95696	1058 aa		6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	ALAS2	P22557	587 aa		6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	ATP2B4	P23634	1241 aa		6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	FAM69C	Q0P6D2	419 aa		6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	SLC9A9	Q8IVB4	645 aa		6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	SCG3	Q8WXD2	468 aa	Known RBP	6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	CABP1	Q9NZU7	370 aa		6.15	□□□□□ -1.43
LMO7-223	ENST00000533299	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	FAM229A	H3BQW9	127 aa		6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	FOXO3	O43524	673 aa		6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	PPP1R12B	O60237	982 aa	Predicted RBP	6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	PRMT3	O60678	531 aa		6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	EPHA4	P54764	986 aa		6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	GRIK4	Q16099	956 aa		6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	ELOA3B	Q3SY89	546 aa		6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	ELOA3	Q8NG57	546 aa		6.14	□□□□□ -1.43
LMO7-223	ENST00000533299	WEE1	P30291	646 aa		6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	COL9A3	Q14050	684 aa	Predicted RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	STAG2	Q8N3U4	1231 aa		6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	SERTM1	A2A2V5	107 aa		6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	PTCD1	O75127	700 aa	Known RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	ZNF468	Q5VIY5	522 aa	Predicted RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	C1orf216	Q8TAB5	229 aa		6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	CHMP7	Q8WUX9	453 aa	Predicted RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	LENG1	Q96BZ8	264 aa	Predicted RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	PRIMPOL	Q96LW4	560 aa		6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	CXXC1	Q9P0U4	656 aa	Predicted RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	ZNF232	Q9UNY5	417 aa		6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	OAS3	Q9Y6K5	1087 aa	Known RBP	6.13	□□□□□ -1.43
LMO7-223	ENST00000533299	SSFA2	P28290	1259 aa		6.12	□□□□□ -1.43
LMO7-223	ENST00000533299	TEAD4	Q15561	434 aa		6.12	□□□□□ -1.43
LMO7-223	ENST00000533299	NBPF1	Q3BBV0	1214 aa		6.12	□□□□□ -1.43
LMO7-223	ENST00000533299	NOS2	P35228	1153 aa		6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	PHKA2	P46019	1235 aa		6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	CCER1	Q8TC90	406 aa	Predicted RBP	6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	CARNS1	A5YM72	827 aa		6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	ARID4A	P29374	1257 aa	Predicted RBP	6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	KCNA1	Q09470	495 aa		6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	OCLN	Q16625	522 aa		6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	NLRP8	Q86W28	1048 aa		6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	COL26A1	Q96A83	441 aa		6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	ZCCHC2	Q9C0B9	1178 aa	Known RBP	6.11	□□□□□ -1.43
LMO7-223	ENST00000533299	LGR5	O75473	907 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	SELP	P16109	830 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	TAT	P17735	454 aa	Predicted RBP	6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	CD97	P48960	835 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	GP2	P55259	537 aa	Known RBP	6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	C4orf17	Q53FE4	359 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	TBCEL	Q5QJ74	424 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	L3MBTL2	Q969R5	705 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	AIDA	Q96BJ3	306 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	MDFI	Q99750	246 aa		6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	C2orf49	Q9BVC5	232 aa	Predicted RBP	6.1	□□□□□ -1.43
LMO7-223	ENST00000533299	PLA2G4A	P47712	749 aa		6.09	□□□□□ -1.43
LMO7-223	ENST00000533299	HIRA	P54198	1017 aa	Predicted RBP	6.09	□□□□□ -1.43
LMO7-223	ENST00000533299	AEBP1	Q8IUX7	1158 aa		6.09	□□□□□ -1.43
LMO7-223	ENST00000533299	ZBTB7C	A1YPR0	619 aa		6.09	□□□□□ -1.44
LMO7-223	ENST00000533299	ATXN7	O15265	892 aa	Predicted RBP	6.09	□□□□□ -1.44
LMO7-223	ENST00000533299	C21orf2	O43822	256 aa		6.09	□□□□□ -1.44
LMO7-223	ENST00000533299	SSTR4	P31391	388 aa		6.09	□□□□□ -1.44
LMO7-223	ENST00000533299	FKBP5	Q13451	457 aa	Predicted RBP	6.09	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms