RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 CRIPAKQ8N1N5 446 aa7.91□□□□□ -1.14
CASP4-211ENST00000533252 ASB16Q96NS5 453 aa7.91□□□□□ -1.14
CASP4-211ENST00000533252 BCL2L13Q9BXK5 485 aa7.91□□□□□ -1.14
CASP4-211ENST00000533252 IRX2Q9BZI1 471 aaPredicted RBP7.91□□□□□ -1.14
CASP4-211ENST00000533252 GGNBP2Q9H3C7 697 aa7.91□□□□□ -1.14
CASP4-211ENST00000533252 DMGDHQ9UI17 866 aaKnown RBP7.91□□□□□ -1.14
CASP4-211ENST00000533252 UNCXA6NJT0 531 aa7.9□□□□□ -1.14
CASP4-211ENST00000533252 PDGFAP04085 211 aa7.9□□□□□ -1.14
CASP4-211ENST00000533252 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.14
CASP4-211ENST00000533252 ZSCAN29Q8IWY8 852 aaPredicted RBP7.9□□□□□ -1.14
CASP4-211ENST00000533252 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
CASP4-211ENST00000533252 NUDT16Q96DE0 195 aaKnown RBP7.9□□□□□ -1.14
CASP4-211ENST00000533252 GMPR2Q9P2T1 348 aaKnown RBP7.9□□□□□ -1.14
CASP4-211ENST00000533252 GJA3Q9Y6H8 435 aa7.9□□□□□ -1.14
CASP4-211ENST00000533252 POLA1P09884 1462 aaPredicted RBP7.89□□□□□ -1.15
CASP4-211ENST00000533252 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
CASP4-211ENST00000533252 TGFBR3LH3BV60 316 aa7.89□□□□□ -1.15
CASP4-211ENST00000533252 PTSQ03393 145 aa7.89□□□□□ -1.15
CASP4-211ENST00000533252 C8orf34Q49A92 452 aa7.89□□□□□ -1.15
CASP4-211ENST00000533252 WDR44Q5JSH3 913 aa7.89□□□□□ -1.15
CASP4-211ENST00000533252 BTLAQ7Z6A9 289 aa7.89□□□□□ -1.15
CASP4-211ENST00000533252 CMTR1Q8N1G2 835 aaKnown RBP7.89□□□□□ -1.15
CASP4-211ENST00000533252 RBCK1Q9BYM8 510 aa7.89□□□□□ -1.15
CASP4-211ENST00000533252 NIF3L1Q9GZT8 377 aa7.89□□□□□ -1.15
CASP4-211ENST00000533252 RAD54L2Q9Y4B4 1467 aa7.88□□□□□ -1.15
CASP4-211ENST00000533252 GPR182O15218 404 aa7.88□□□□□ -1.15
CASP4-211ENST00000533252 F11P03951 625 aa7.88□□□□□ -1.15
CASP4-211ENST00000533252 MZF1P28698 734 aaPredicted RBP7.88□□□□□ -1.15
CASP4-211ENST00000533252 CEP63Q96MT8 703 aa7.88□□□□□ -1.15
CASP4-211ENST00000533252 SETDB2Q96T68 719 aa7.88□□□□□ -1.15
CASP4-211ENST00000533252 ZCCHC2Q9C0B9 1178 aaKnown RBP7.88□□□□□ -1.15
CASP4-211ENST00000533252 CUEDC1Q9NWM3 386 aaPredicted RBP7.88□□□□□ -1.15
CASP4-211ENST00000533252 DYRK1BQ9Y463 629 aa7.88□□□□□ -1.15
CASP4-211ENST00000533252 GRIN2BQ13224 1484 aa7.87□□□□□ -1.15
CASP4-211ENST00000533252 P4HBP07237 508 aaKnown RBP7.87□□□□□ -1.15
CASP4-211ENST00000533252 THBS1P07996 1170 aa7.87□□□□□ -1.15
CASP4-211ENST00000533252 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
CASP4-211ENST00000533252 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
CASP4-211ENST00000533252 MAPK8P45983 427 aa7.87□□□□□ -1.15
CASP4-211ENST00000533252 RNF19AQ9NV58 838 aa7.87□□□□□ -1.15
CASP4-211ENST00000533252 WWC3Q9ULE0 1092 aa7.87□□□□□ -1.15
CASP4-211ENST00000533252 FGD5Q6ZNL6 1462 aa7.87□□□□□ -1.15
CASP4-211ENST00000533252 LCE2BO14633 110 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 IGHA2P01877 340 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
CASP4-211ENST00000533252 INPP5BP32019 993 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 PLCB3Q01970 1234 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 GRIN2CQ14957 1233 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 LAPTM4AQ15012 233 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 FAM9AQ8IZU1 332 aaPredicted RBP7.86□□□□□ -1.15
CASP4-211ENST00000533252 PGBD3Q8N328 593 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 ANKIB1Q9P2G1 1089 aa7.86□□□□□ -1.15
CASP4-211ENST00000533252 RTCBQ9Y3I0 505 aaKnown RBP7.86□□□□□ -1.15
CASP4-211ENST00000533252 SLC35F4A4IF30 521 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 POTECB2RU33 542 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 ORC1Q13415 861 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 DBN1Q16643 649 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 CCDC155Q8N6L0 562 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 FAM129BQ96TA1 746 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 AMOTL2Q9Y2J4 779 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 GAPVD1Q14C86 1478 aa7.85□□□□□ -1.15
CASP4-211ENST00000533252 MAGI1Q96QZ7 1491 aaPredicted RBP7.85□□□□□ -1.15
CASP4-211ENST00000533252 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
CASP4-211ENST00000533252 TREHO43280 583 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 ARSDP51689 593 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 TYRO3Q06418 890 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 EHHADHQ08426 723 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 SFSWAPQ12872 951 aaKnown RBP7.84□□□□□ -1.15
CASP4-211ENST00000533252 DSC3Q14574 896 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 TRIP4Q15650 581 aaPredicted RBP7.84□□□□□ -1.15
CASP4-211ENST00000533252 Q6ZNB5 142 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 FBXO33Q7Z6M2 555 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 GJD3Q8N144 294 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 PIK3R5Q8WYR1 880 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 KCNMB2Q9Y691 235 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
CASP4-211ENST00000533252 EIF4G3O43432 1585 aaKnown RBP7.84□□□□□ -1.15
CASP4-211ENST00000533252 DCDC2BA2VCK2 349 aa7.83□□□□□ -1.16
CASP4-211ENST00000533252 ERCC3P19447 782 aa7.83□□□□□ -1.16
CASP4-211ENST00000533252 HIF1AQ16665 826 aa7.83□□□□□ -1.16
CASP4-211ENST00000533252 EAPPQ56P03 285 aaPredicted RBP7.83□□□□□ -1.16
CASP4-211ENST00000533252 IER5Q5VY09 327 aa7.83□□□□□ -1.16
CASP4-211ENST00000533252 FOXD3Q9UJU5 478 aaPredicted RBP7.83□□□□□ -1.16
CASP4-211ENST00000533252 HCN2Q9UL51 889 aa7.83□□□□□ -1.16
CASP4-211ENST00000533252 ARHGEF11O15085 1522 aa7.83□□□□□ -1.16
CASP4-211ENST00000533252 SYNJ2O15056 1496 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 SNAPC4Q5SXM2 1469 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 TARBP1Q13395 1621 aaKnown RBP7.82□□□□□ -1.16
CASP4-211ENST00000533252 UBAP1LF5GYI3 381 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 KHNYNO15037 678 aaKnown RBP7.82□□□□□ -1.16
CASP4-211ENST00000533252 SYNJ1O43426 1573 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 PCSK2P16519 638 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 EFHC2Q5JST6 749 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 KRT25Q7Z3Z0 450 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 TTC16Q8NEE8 873 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 TRIM47Q96LD4 638 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 CITED4Q96RK1 184 aa7.82□□□□□ -1.16
CASP4-211ENST00000533252 NUCKS1Q9H1E3 243 aaKnown RBP7.82□□□□□ -1.16
CASP4-211ENST00000533252 BRD7Q9NPI1 651 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms