RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 BRIP1Q9BX63 1249 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 FHDC1Q9C0D6 1143 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
TRAPPC4-211ENST00000533012 SH3TC1Q8TE82 1336 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 MS4A1P11836 297 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 TRIM27P14373 513 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 HSP90B1P14625 803 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 PDE6BP35913 854 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 CCT4P50991 539 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 TGFB2P61812 414 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 GCKRQ14397 625 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 SLC10A5Q5PT55 438 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 ZBTB38Q8NAP3 1195 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 FAM89AQ96GI7 184 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 BCORQ6W2J9 1755 aa14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-211ENST00000533012 PCCAP05165 728 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-211ENST00000533012 SYT17Q9BSW7 474 aa14.21□□□□□ -0.13
TRAPPC4-211ENST00000533012 C9orf78Q9NZ63 289 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-211ENST00000533012 PDZRN3Q9UPQ7 1066 aa14.21□□□□□ -0.13
TRAPPC4-211ENST00000533012 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
TRAPPC4-211ENST00000533012 H7C1W4 665 aa14.2□□□□□ -0.14
TRAPPC4-211ENST00000533012 RTL5Q5HYW3 569 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-211ENST00000533012 FTSJ3Q8IY81 847 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-211ENST00000533012 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
TRAPPC4-211ENST00000533012 CLUAP1Q96AJ1 413 aa14.2□□□□□ -0.14
TRAPPC4-211ENST00000533012 NLRP3Q96P20 1036 aa14.2□□□□□ -0.14
TRAPPC4-211ENST00000533012 NUP98P52948 1817 aa14.2□□□□□ -0.14
TRAPPC4-211ENST00000533012 COL24A1Q17RW2 1714 aa14.19□□□□□ -0.14
TRAPPC4-211ENST00000533012 H0YIN7 160 aa14.19□□□□□ -0.14
TRAPPC4-211ENST00000533012 IRS4O14654 1257 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-211ENST00000533012 INTS3Q68E01 1043 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-211ENST00000533012 DZIP1LQ8IYY4 767 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-211ENST00000533012 JARID2Q92833 1246 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-211ENST00000533012 SRCAPQ6ZRS2 3230 aa14.19□□□□□ -0.14
TRAPPC4-211ENST00000533012 C10orf71Q711Q0 1435 aa14.18□□□□□ -0.14
TRAPPC4-211ENST00000533012 A0A0G2JLW4 131 aa14.18□□□□□ -0.14
TRAPPC4-211ENST00000533012 GRM8O00222 908 aa14.18□□□□□ -0.14
TRAPPC4-211ENST00000533012 PLIN1O60240 522 aa14.18□□□□□ -0.14
TRAPPC4-211ENST00000533012 HCLS1P14317 486 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC4-211ENST00000533012 UBE3BQ7Z3V4 1068 aa14.18□□□□□ -0.14
TRAPPC4-211ENST00000533012 C2CD5Q86YS7 1000 aa14.18□□□□□ -0.14
TRAPPC4-211ENST00000533012 ABCC4O15439 1325 aa14.17□□□□□ -0.14
TRAPPC4-211ENST00000533012 ARFGEF2Q9Y6D5 1785 aa14.17□□□□□ -0.14
TRAPPC4-211ENST00000533012 KLRG2A4D1S0 409 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC4-211ENST00000533012 DPEP1P16444 411 aa14.17□□□□□ -0.14
TRAPPC4-211ENST00000533012 TNNQ9UQP3 1299 aa14.17□□□□□ -0.14
TRAPPC4-211ENST00000533012 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
TRAPPC4-211ENST00000533012 LRP5O75197 1615 aa14.16□□□□□ -0.14
TRAPPC4-211ENST00000533012 PDE8AO60658 829 aa14.16□□□□□ -0.14
TRAPPC4-211ENST00000533012 CHRNA5P30532 468 aa14.16□□□□□ -0.14
TRAPPC4-211ENST00000533012 TMEM57Q8N5G2 664 aa14.16□□□□□ -0.14
TRAPPC4-211ENST00000533012 NLGN2Q8NFZ4 835 aa14.16□□□□□ -0.14
TRAPPC4-211ENST00000533012 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
TRAPPC4-211ENST00000533012 PXDNLA1KZ92 1463 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 NBPF7P0C2Y1 421 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 SRGNP10124 158 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 NPR1P16066 1061 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 CASP7P55210 303 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 PANK1Q8TE04 598 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 RPGRQ92834 1020 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 ZNF622Q969S3 477 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 MASTLQ96GX5 879 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 PIM2Q9P1W9 311 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 HDAC5Q9UQL6 1122 aa14.15□□□□□ -0.14
TRAPPC4-211ENST00000533012 UTYO14607 1347 aa14.15□□□□□ -0.15
TRAPPC4-211ENST00000533012 KCNA3P22001 575 aa14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 ALDH1B1P30837 517 aa14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 SF3B3Q15393 1217 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 STYK1Q6J9G0 422 aa14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 ITPRIPQ8IWB1 547 aa14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 RBM17Q96I25 401 aaKnown RBP14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 PLA2G12BQ9BX93 195 aa14.14□□□□□ -0.15
TRAPPC4-211ENST00000533012 NRXN2Q9P2S2 1712 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 GNAI3P08754 354 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 UBTFL1P0CB47 393 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 RLBP1P12271 317 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 RRP1P56182 461 aaKnown RBP14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 C3orf67Q6ZVT6 689 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 CNKSR1Q969H4 720 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 ANKRD36CQ5JPF3 1778 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 RIC1Q4ADV7 1423 aa14.13□□□□□ -0.15
TRAPPC4-211ENST00000533012 HOXA10P31260 410 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC4-211ENST00000533012 CTSWP56202 376 aa14.12□□□□□ -0.15
TRAPPC4-211ENST00000533012 DALRD3Q5D0E6 543 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-211ENST00000533012 DDX46Q7L014 1031 aaKnown RBP14.12□□□□□ -0.15
TRAPPC4-211ENST00000533012 TTLL6Q8N841 843 aa14.12□□□□□ -0.15
TRAPPC4-211ENST00000533012 CRAMP1Q96RY5 1269 aa14.12□□□□□ -0.15
TRAPPC4-211ENST00000533012 AFDNP55196 1824 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-211ENST00000533012 FOXO4P98177 505 aa14.11□□□□□ -0.15
TRAPPC4-211ENST00000533012 TTLL11Q8NHH1 800 aa14.11□□□□□ -0.15
TRAPPC4-211ENST00000533012 SUCLG2Q96I99 432 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms