RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 LAMB2P55268 1798 aa16.77■□□□□ 0.27
AP003040.1-201ENST00000532044 FZD9O00144 591 aa16.76■□□□□ 0.27
AP003040.1-201ENST00000532044 GPTP24298 496 aa16.76■□□□□ 0.27
AP003040.1-201ENST00000532044 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
AP003040.1-201ENST00000532044 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
AP003040.1-201ENST00000532044 LTBP1Q14766 1721 aa16.75■□□□□ 0.27
AP003040.1-201ENST00000532044 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 ANXA1P04083 346 aa16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 IARSP41252 1262 aaKnown RBP16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 KRT24Q2M2I5 525 aa16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 PARP10Q53GL7 1025 aa16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 SLC10A5Q5PT55 438 aa16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 CRAMP1Q96RY5 1269 aa16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
AP003040.1-201ENST00000532044 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
AP003040.1-201ENST00000532044 CCDC146Q8IYE0 955 aa16.73■□□□□ 0.27
AP003040.1-201ENST00000532044 SYNE4Q8N205 404 aa16.73■□□□□ 0.27
AP003040.1-201ENST00000532044 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
AP003040.1-201ENST00000532044 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
AP003040.1-201ENST00000532044 CC2D2BQ6DHV5 1058 aa16.72■□□□□ 0.27
AP003040.1-201ENST00000532044 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
AP003040.1-201ENST00000532044 LRRC37AA6NMS7 1700 aa16.71■□□□□ 0.27
AP003040.1-201ENST00000532044 IQCA1LA6NCM1 817 aa16.71■□□□□ 0.27
AP003040.1-201ENST00000532044 EIF2S2P20042 333 aaKnown RBP16.71■□□□□ 0.27
AP003040.1-201ENST00000532044 LDHDQ86WU2 507 aa16.71■□□□□ 0.27
AP003040.1-201ENST00000532044 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
AP003040.1-201ENST00000532044 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
AP003040.1-201ENST00000532044 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 ITGBL1O95965 494 aaPredicted RBP16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 HOXB7P09629 217 aa16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 COPS6Q7L5N1 327 aa16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 NLRP10Q86W26 655 aa16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
AP003040.1-201ENST00000532044 COL4A1P02462 1669 aa16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 ZNF853P0CG23 659 aa16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 GPC2Q8N158 579 aa16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 RPGRQ92834 1020 aaKnown RBP16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 ABCC4O15439 1325 aa16.69■□□□□ 0.26
AP003040.1-201ENST00000532044 PPEF1O14829 653 aaPredicted RBP16.68■□□□□ 0.26
AP003040.1-201ENST00000532044 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
AP003040.1-201ENST00000532044 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
AP003040.1-201ENST00000532044 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
AP003040.1-201ENST00000532044 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
AP003040.1-201ENST00000532044 NECTIN2Q92692 538 aa16.67■□□□□ 0.26
AP003040.1-201ENST00000532044 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
AP003040.1-201ENST00000532044 CHPF2Q9P2E5 772 aa16.67■□□□□ 0.26
AP003040.1-201ENST00000532044 HACL1Q9UJ83 578 aa16.67■□□□□ 0.26
AP003040.1-201ENST00000532044 ATP6V0A2Q9Y487 856 aa16.67■□□□□ 0.26
AP003040.1-201ENST00000532044 EPHX2P34913 555 aa16.66■□□□□ 0.26
AP003040.1-201ENST00000532044 HSP90AB3PQ58FF7 597 aa16.66■□□□□ 0.26
AP003040.1-201ENST00000532044 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
AP003040.1-201ENST00000532044 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
AP003040.1-201ENST00000532044 SCNN1DP51172 638 aa16.65■□□□□ 0.26
AP003040.1-201ENST00000532044 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
AP003040.1-201ENST00000532044 COL13A1Q5TAT6 717 aaPredicted RBP16.65■□□□□ 0.26
AP003040.1-201ENST00000532044 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
AP003040.1-201ENST00000532044 TAF1P21675 1872 aa16.65■□□□□ 0.26
AP003040.1-201ENST00000532044 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
AP003040.1-201ENST00000532044 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
AP003040.1-201ENST00000532044 HDGFL1Q5TGJ6 251 aa16.64■□□□□ 0.25
AP003040.1-201ENST00000532044 PLBD2Q8NHP8 589 aa16.64■□□□□ 0.25
AP003040.1-201ENST00000532044 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
AP003040.1-201ENST00000532044 JDP2Q8WYK2 163 aa16.63■□□□□ 0.25
AP003040.1-201ENST00000532044 VPS33BQ9H267 617 aa16.63■□□□□ 0.25
AP003040.1-201ENST00000532044 SH3TC1Q8TE82 1336 aa16.63■□□□□ 0.25
AP003040.1-201ENST00000532044 HSPA1AP0DMV8 641 aaKnown RBP16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 HSPA1BP0DMV9 641 aaKnown RBP16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 DUSP27Q5VZP5 1158 aa16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 SP8Q8IXZ3 490 aa16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 DBF4Q9UBU7 674 aaPredicted RBP16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
AP003040.1-201ENST00000532044 BBOX1O75936 387 aa16.61■□□□□ 0.25
AP003040.1-201ENST00000532044 TRIM28Q13263 835 aaKnown RBP16.61■□□□□ 0.25
AP003040.1-201ENST00000532044 GRAPQ13588 217 aa16.61■□□□□ 0.25
AP003040.1-201ENST00000532044 AOC3Q16853 763 aa16.61■□□□□ 0.25
AP003040.1-201ENST00000532044 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
AP003040.1-201ENST00000532044 IFT57Q9NWB7 429 aa16.61■□□□□ 0.25
AP003040.1-201ENST00000532044 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
AP003040.1-201ENST00000532044 EPS15P42566 896 aa16.6■□□□□ 0.25
AP003040.1-201ENST00000532044 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
AP003040.1-201ENST00000532044 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
AP003040.1-201ENST00000532044 ANKRD13DQ6ZTN6 518 aa16.6■□□□□ 0.25
AP003040.1-201ENST00000532044 MKRN1Q9UHC7 482 aaKnown RBP16.6■□□□□ 0.25
AP003040.1-201ENST00000532044 LAS1LQ9Y4W2 734 aaKnown RBP16.6■□□□□ 0.25
AP003040.1-201ENST00000532044 APAF1O14727 1248 aa16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 PPIP5K2O43314 1243 aa16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 KIAA2012Q0VF49 1180 aa16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 NIM1KQ8IY84 436 aa16.59■□□□□ 0.25
AP003040.1-201ENST00000532044 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms