RNA–Protein interactions for RNA: ENST00000531983.1

RBBP4-219, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-219ENST00000531983 PIM2Q9P1W9 311 aa7.67□□□□□ -1.18
RBBP4-219ENST00000531983 USP42Q9H9J4 1324 aaKnown RBP7.67□□□□□ -1.18
RBBP4-219ENST00000531983 ZC3H4Q9UPT8 1303 aaKnown RBP7.67□□□□□ -1.18
RBBP4-219ENST00000531983 RPS6KA4O75676 772 aa7.66□□□□□ -1.18
RBBP4-219ENST00000531983 AMOTQ4VCS5 1084 aa7.66□□□□□ -1.18
RBBP4-219ENST00000531983 PLEKHO1Q53GL0 409 aaPredicted RBP7.66□□□□□ -1.18
RBBP4-219ENST00000531983 RC3H1Q5TC82 1133 aaKnown RBP7.66□□□□□ -1.18
RBBP4-219ENST00000531983 ARHGEF1Q92888 912 aaKnown RBP7.66□□□□□ -1.18
RBBP4-219ENST00000531983 KLRG1Q96E93 195 aa7.66□□□□□ -1.18
RBBP4-219ENST00000531983 CARD14Q9BXL6 1004 aa7.66□□□□□ -1.18
RBBP4-219ENST00000531983 POLKQ9UBT6 870 aa7.66□□□□□ -1.18
RBBP4-219ENST00000531983 SEPT9Q9UHD8 586 aaPredicted RBP7.66□□□□□ -1.18
RBBP4-219ENST00000531983 MRC1P22897 1456 aa7.66□□□□□ -1.18
RBBP4-219ENST00000531983 SCN7AQ01118 1682 aa7.66□□□□□ -1.18
RBBP4-219ENST00000531983 LCE2BO14633 110 aa7.65□□□□□ -1.18
RBBP4-219ENST00000531983 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.18
RBBP4-219ENST00000531983 CRKLP46109 303 aaKnown RBP7.65□□□□□ -1.18
RBBP4-219ENST00000531983 SMC1BQ8NDV3 1235 aa7.65□□□□□ -1.18
RBBP4-219ENST00000531983 SCN11AQ9UI33 1791 aa7.65□□□□□ -1.18
RBBP4-219ENST00000531983 TSR3Q9UJK0 312 aaKnown RBP7.65□□□□□ -1.18
RBBP4-219ENST00000531983 ADAMTS7Q9UKP4 1686 aa7.65□□□□□ -1.18
RBBP4-219ENST00000531983 COL15A1P39059 1388 aa7.64□□□□□ -1.19
RBBP4-219ENST00000531983 GFRA3O60609 400 aa7.64□□□□□ -1.19
RBBP4-219ENST00000531983 ZPR1O75312 459 aa7.64□□□□□ -1.19
RBBP4-219ENST00000531983 MTHFSP49914 203 aa7.64□□□□□ -1.19
RBBP4-219ENST00000531983 TNS4Q8IZW8 715 aa7.64□□□□□ -1.19
RBBP4-219ENST00000531983 SLC4A9Q96Q91 983 aa7.64□□□□□ -1.19
RBBP4-219ENST00000531983 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.64□□□□□ -1.19
RBBP4-219ENST00000531983 SRP68Q9UHB9 627 aaKnown RBP7.64□□□□□ -1.19
RBBP4-219ENST00000531983 NRXN2Q9P2S2 1712 aa7.64□□□□□ -1.19
RBBP4-219ENST00000531983 TRIM6-TRIM34B2RNG4 842 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 CHRNA5P30532 468 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 HTRA3P83110 453 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 RASSF7Q02833 373 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 DDR1Q08345 913 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 TRAF7Q6Q0C0 670 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 DNAJC5GQ8N7S2 189 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 JMYQ8N9B5 988 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 LRCH3Q96II8 777 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 HPS5Q9UPZ3 1129 aa7.63□□□□□ -1.19
RBBP4-219ENST00000531983 MYH14Q7Z406 1995 aaKnown RBP7.62□□□□□ -1.19
RBBP4-219ENST00000531983 COL11A2P13942 1736 aaPredicted RBP7.62□□□□□ -1.19
RBBP4-219ENST00000531983 POLRMTO00411 1230 aaKnown RBP7.62□□□□□ -1.19
RBBP4-219ENST00000531983 C6orf132Q5T0Z8 1188 aa7.62□□□□□ -1.19
RBBP4-219ENST00000531983 USPL1Q5W0Q7 1092 aa7.62□□□□□ -1.19
RBBP4-219ENST00000531983 EPAS1Q99814 870 aa7.62□□□□□ -1.19
RBBP4-219ENST00000531983 PCNTO95613 3336 aa7.62□□□□□ -1.19
RBBP4-219ENST00000531983 UBR2Q8IWV8 1755 aa7.61□□□□□ -1.19
RBBP4-219ENST00000531983 SOS1Q07889 1333 aaPredicted RBP7.61□□□□□ -1.19
RBBP4-219ENST00000531983 GTPBP6O43824 516 aaPredicted RBP7.61□□□□□ -1.19
RBBP4-219ENST00000531983 LMNB1P20700 586 aa7.61□□□□□ -1.19
RBBP4-219ENST00000531983 KCNA3P22001 575 aa7.61□□□□□ -1.19
RBBP4-219ENST00000531983 COL13A1Q5TAT6 717 aaPredicted RBP7.61□□□□□ -1.19
RBBP4-219ENST00000531983 AEBP1Q8IUX7 1158 aa7.61□□□□□ -1.19
RBBP4-219ENST00000531983 RRAGCQ9HB90 399 aa7.61□□□□□ -1.19
RBBP4-219ENST00000531983 AFDNP55196 1824 aaKnown RBP7.61□□□□□ -1.19
RBBP4-219ENST00000531983 SBF1O95248 1867 aa7.6□□□□□ -1.19
RBBP4-219ENST00000531983 VIRMAQ69YN4 1812 aaKnown RBP7.6□□□□□ -1.19
RBBP4-219ENST00000531983 SULT6B1Q6IMI4 303 aa7.6□□□□□ -1.19
RBBP4-219ENST00000531983 MORC1Q86VD1 984 aa7.6□□□□□ -1.19
RBBP4-219ENST00000531983 NFATC2IPQ8NCF5 419 aa7.6□□□□□ -1.19
RBBP4-219ENST00000531983 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 NPHP1O15259 732 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 HSPA1AP0DMV8 641 aaKnown RBP7.59□□□□□ -1.19
RBBP4-219ENST00000531983 HSPA1BP0DMV9 641 aaKnown RBP7.59□□□□□ -1.19
RBBP4-219ENST00000531983 VEGFAP15692 232 aaPredicted RBP7.59□□□□□ -1.19
RBBP4-219ENST00000531983 AKAP4Q5JQC9 854 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 C2CD5Q86YS7 1000 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 DNAJC10Q8IXB1 793 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 TTC5Q8N0Z6 440 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 TTLL6Q8N841 843 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 SLC52A2Q9HAB3 445 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 NARFQ9UHQ1 456 aa7.59□□□□□ -1.19
RBBP4-219ENST00000531983 BCORQ6W2J9 1755 aa7.59□□□□□ -1.2
RBBP4-219ENST00000531983 ARFGEF2Q9Y6D5 1785 aa7.59□□□□□ -1.2
RBBP4-219ENST00000531983 GLTPD2A6NH11 291 aa7.58□□□□□ -1.2
RBBP4-219ENST00000531983 H0YIN7 160 aa7.58□□□□□ -1.2
RBBP4-219ENST00000531983 NRG2O14511 850 aaPredicted RBP7.58□□□□□ -1.2
RBBP4-219ENST00000531983 PRELPP51888 382 aa7.58□□□□□ -1.2
RBBP4-219ENST00000531983 NFIXQ14938 502 aa7.58□□□□□ -1.2
RBBP4-219ENST00000531983 INTS5Q6P9B9 1019 aaKnown RBP7.58□□□□□ -1.2
RBBP4-219ENST00000531983 NPM2Q86SE8 214 aaKnown RBP7.58□□□□□ -1.2
RBBP4-219ENST00000531983 TIMELESSQ9UNS1 1208 aa7.58□□□□□ -1.2
RBBP4-219ENST00000531983 ZBTB1Q9Y2K1 713 aa7.58□□□□□ -1.2
RBBP4-219ENST00000531983 A0A087WZG4 1122 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 SERPINB2P05120 415 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 CYP19A1P11511 503 aaPredicted RBP7.57□□□□□ -1.2
RBBP4-219ENST00000531983 TM4SF1P30408 202 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 EIF4G2P78344 907 aaKnown RBP eCLIP7.57□□□□□ -1.2
RBBP4-219ENST00000531983 PRKD2Q9BZL6 878 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 PANK3Q9H999 370 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 PDZRN3Q9UPQ7 1066 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
RBBP4-219ENST00000531983 KNSTRNQ9Y448 316 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 CACNA1SQ13698 1873 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 ANKRD31Q8N7Z5 1873 aa7.57□□□□□ -1.2
RBBP4-219ENST00000531983 NFKBIEO00221 500 aa7.56□□□□□ -1.2
RBBP4-219ENST00000531983 STARD3NLO95772 234 aa7.56□□□□□ -1.2
RBBP4-219ENST00000531983 CANXP27824 592 aaKnown RBP7.56□□□□□ -1.2
RBBP4-219ENST00000531983 PDE6BP35913 854 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms