RNA–Protein interactions for RNA: ENST00000531916.5

CSRP1-214, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 5 BASIC

Gene CSRP1, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-214ENST00000531916 KRT24Q2M2I5 525 aa23.83■■□□□ 1.41
CSRP1-214ENST00000531916 JMYQ8N9B5 988 aa23.83■■□□□ 1.41
CSRP1-214ENST00000531916 L3MBTL3Q96JM7 780 aaPredicted RBP23.83■■□□□ 1.41
CSRP1-214ENST00000531916 C3orf67Q6ZVT6 689 aa23.82■■□□□ 1.4
CSRP1-214ENST00000531916 PPP1R42Q7Z4L9 355 aa23.82■■□□□ 1.4
CSRP1-214ENST00000531916 PSMD1Q99460 953 aa23.82■■□□□ 1.4
CSRP1-214ENST00000531916 SLC10A5Q5PT55 438 aa23.81■■□□□ 1.4
CSRP1-214ENST00000531916 CC2D2BQ6DHV5 1058 aa23.81■■□□□ 1.4
CSRP1-214ENST00000531916 COPS6Q7L5N1 327 aa23.81■■□□□ 1.4
CSRP1-214ENST00000531916 SYNE4Q8N205 404 aa23.81■■□□□ 1.4
CSRP1-214ENST00000531916 RPGRQ92834 1020 aaKnown RBP23.81■■□□□ 1.4
CSRP1-214ENST00000531916 CRAMP1Q96RY5 1269 aa23.81■■□□□ 1.4
CSRP1-214ENST00000531916 DDX21Q9NR30 783 aaKnown RBP eCLIP23.81■■□□□ 1.4
CSRP1-214ENST00000531916 ZNF541Q9H0D2 1346 aa23.81■■□□□ 1.4
CSRP1-214ENST00000531916 IARSP41252 1262 aaKnown RBP23.8■■□□□ 1.4
CSRP1-214ENST00000531916 NECTIN2Q92692 538 aa23.8■■□□□ 1.4
CSRP1-214ENST00000531916 FZD9O00144 591 aa23.79■■□□□ 1.4
CSRP1-214ENST00000531916 POTEIP0CG38 1075 aa23.79■■□□□ 1.4
CSRP1-214ENST00000531916 POTEJP0CG39 1038 aa23.79■■□□□ 1.4
CSRP1-214ENST00000531916 XAGE3Q8WTP9 111 aa23.79■■□□□ 1.4
CSRP1-214ENST00000531916 RNF123Q5XPI4 1314 aa23.79■■□□□ 1.4
CSRP1-214ENST00000531916 IFFO2Q5TF58 517 aa23.78■■□□□ 1.4
CSRP1-214ENST00000531916 SLC51AQ86UW1 340 aa23.78■■□□□ 1.4
CSRP1-214ENST00000531916 UTP14AQ9BVJ6 771 aaKnown RBP23.78■■□□□ 1.4
CSRP1-214ENST00000531916 COL4A5P29400 1685 aa23.77■■□□□ 1.4
CSRP1-214ENST00000531916 IQCA1LA6NCM1 817 aa23.77■■□□□ 1.4
CSRP1-214ENST00000531916 HOXB7P09629 217 aa23.77■■□□□ 1.4
CSRP1-214ENST00000531916 CHADLQ6NUI6 762 aa23.77■■□□□ 1.4
CSRP1-214ENST00000531916 NLRP10Q86W26 655 aa23.77■■□□□ 1.4
CSRP1-214ENST00000531916 RBM17Q96I25 401 aaKnown RBP23.77■■□□□ 1.4
CSRP1-214ENST00000531916 LAS1LQ9Y4W2 734 aaKnown RBP23.77■■□□□ 1.4
CSRP1-214ENST00000531916 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
CSRP1-214ENST00000531916 GRIPAP1Q4V328 841 aa23.76■■□□□ 1.39
CSRP1-214ENST00000531916 HSP90AB3PQ58FF7 597 aa23.76■■□□□ 1.39
CSRP1-214ENST00000531916 CFAP44Q96MT7 982 aa23.76■■□□□ 1.39
CSRP1-214ENST00000531916 NLRP3Q96P20 1036 aa23.76■■□□□ 1.39
CSRP1-214ENST00000531916 TAF1DQ9H5J8 278 aaPredicted RBP23.76■■□□□ 1.39
CSRP1-214ENST00000531916 CHPF2Q9P2E5 772 aa23.76■■□□□ 1.39
CSRP1-214ENST00000531916 ANKRD36CQ5JPF3 1778 aa23.75■■□□□ 1.39
CSRP1-214ENST00000531916 TCIRG1Q13488 830 aa23.75■■□□□ 1.39
CSRP1-214ENST00000531916 SCN4AP35499 1836 aa23.75■■□□□ 1.39
CSRP1-214ENST00000531916 PPEF1O14829 653 aaPredicted RBP23.74■■□□□ 1.39
CSRP1-214ENST00000531916 ZNF853P0CG23 659 aa23.74■■□□□ 1.39
CSRP1-214ENST00000531916 HDGFL1Q5TGJ6 251 aa23.73■■□□□ 1.39
CSRP1-214ENST00000531916 LDHDQ86WU2 507 aa23.72■■□□□ 1.39
CSRP1-214ENST00000531916 MBIPQ9NS73 344 aa23.72■■□□□ 1.39
CSRP1-214ENST00000531916 ADAMTSL1Q8N6G6 1762 aa23.71■■□□□ 1.39
CSRP1-214ENST00000531916 ABCC4O15439 1325 aa23.71■■□□□ 1.39
CSRP1-214ENST00000531916 GPC2Q8N158 579 aa23.71■■□□□ 1.39
CSRP1-214ENST00000531916 PLBD2Q8NHP8 589 aa23.71■■□□□ 1.39
CSRP1-214ENST00000531916 DBF4Q9UBU7 674 aaPredicted RBP23.71■■□□□ 1.39
CSRP1-214ENST00000531916 ATP6V0A2Q9Y487 856 aa23.71■■□□□ 1.39
CSRP1-214ENST00000531916 APAF1O14727 1248 aa23.7■■□□□ 1.38
CSRP1-214ENST00000531916 DUSP27Q5VZP5 1158 aa23.7■■□□□ 1.38
CSRP1-214ENST00000531916 JDP2Q8WYK2 163 aa23.7■■□□□ 1.38
CSRP1-214ENST00000531916 HACL1Q9UJ83 578 aa23.7■■□□□ 1.38
CSRP1-214ENST00000531916 SH3TC1Q8TE82 1336 aa23.69■■□□□ 1.38
CSRP1-214ENST00000531916 PASKQ96RG2 1323 aa23.69■■□□□ 1.38
CSRP1-214ENST00000531916 HCLS1P14317 486 aaPredicted RBP23.69■■□□□ 1.38
CSRP1-214ENST00000531916 TRMT112Q9UI30 125 aaKnown RBP23.69■■□□□ 1.38
CSRP1-214ENST00000531916 LAMB2P55268 1798 aa23.68■■□□□ 1.38
CSRP1-214ENST00000531916 TCERG1O14776 1098 aaKnown RBP23.68■■□□□ 1.38
CSRP1-214ENST00000531916 EPHX2P34913 555 aa23.68■■□□□ 1.38
CSRP1-214ENST00000531916 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
CSRP1-214ENST00000531916 ISCA1Q9BUE6 129 aa23.68■■□□□ 1.38
CSRP1-214ENST00000531916 CREBZFQ9NS37 354 aa23.68■■□□□ 1.38
CSRP1-214ENST00000531916 IFT57Q9NWB7 429 aa23.68■■□□□ 1.38
CSRP1-214ENST00000531916 BBOX1O75936 387 aa23.67■■□□□ 1.38
CSRP1-214ENST00000531916 ITGBL1O95965 494 aaPredicted RBP23.67■■□□□ 1.38
CSRP1-214ENST00000531916 LARGE2Q8N3Y3 721 aa23.67■■□□□ 1.38
CSRP1-214ENST00000531916 RTFDC1Q9BY42 306 aaPredicted RBP23.67■■□□□ 1.38
CSRP1-214ENST00000531916 HYPKQ9NX55 129 aa23.67■■□□□ 1.38
CSRP1-214ENST00000531916 VPS33BQ9H267 617 aa23.66■■□□□ 1.38
CSRP1-214ENST00000531916 EIF6P56537 245 aaKnown RBP23.65■■□□□ 1.38
CSRP1-214ENST00000531916 PNMA8AQ86V59 439 aaPredicted RBP23.65■■□□□ 1.38
CSRP1-214ENST00000531916 SP8Q8IXZ3 490 aa23.65■■□□□ 1.38
CSRP1-214ENST00000531916 LTBP1Q14766 1721 aa23.64■■□□□ 1.38
CSRP1-214ENST00000531916 CALD1Q05682 793 aaKnown RBP23.64■■□□□ 1.37
CSRP1-214ENST00000531916 EAPPQ56P03 285 aaPredicted RBP23.64■■□□□ 1.37
CSRP1-214ENST00000531916 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
CSRP1-214ENST00000531916 SCNN1DP51172 638 aa23.63■■□□□ 1.37
CSRP1-214ENST00000531916 GNAI1P63096 354 aa23.63■■□□□ 1.37
CSRP1-214ENST00000531916 TRIM28Q13263 835 aaKnown RBP23.63■■□□□ 1.37
CSRP1-214ENST00000531916 GRAPQ13588 217 aa23.63■■□□□ 1.37
CSRP1-214ENST00000531916 AOC3Q16853 763 aa23.63■■□□□ 1.37
CSRP1-214ENST00000531916 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
CSRP1-214ENST00000531916 DDX60Q8IY21 1712 aaKnown RBP23.62■■□□□ 1.37
CSRP1-214ENST00000531916 PPIP5K2O43314 1243 aa23.62■■□□□ 1.37
CSRP1-214ENST00000531916 CCDC184Q52MB2 194 aa23.62■■□□□ 1.37
CSRP1-214ENST00000531916 DDX46Q7L014 1031 aaKnown RBP23.62■■□□□ 1.37
CSRP1-214ENST00000531916 NIM1KQ8IY84 436 aa23.62■■□□□ 1.37
CSRP1-214ENST00000531916 TMX4Q9H1E5 349 aaPredicted RBP23.62■■□□□ 1.37
CSRP1-214ENST00000531916 GJA3Q9Y6H8 435 aa23.62■■□□□ 1.37
CSRP1-214ENST00000531916 ATP5J2-PTCD1G3V325 749 aa23.61■■□□□ 1.37
CSRP1-214ENST00000531916 SUPT20HQ8NEM7 779 aa23.61■■□□□ 1.37
CSRP1-214ENST00000531916 ZNF428Q96B54 188 aa23.61■■□□□ 1.37
CSRP1-214ENST00000531916 FAM89AQ96GI7 184 aa23.61■■□□□ 1.37
CSRP1-214ENST00000531916 SF3B3Q15393 1217 aaKnown RBP23.6■■□□□ 1.37
CSRP1-214ENST00000531916 DPP8Q6V1X1 898 aaPredicted RBP23.6■■□□□ 1.37
CSRP1-214ENST00000531916 DUOX1Q9NRD9 1551 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms