RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 RASSF10A6NK89 507 aa12.29□□□□□ -0.44
NEDD8-206ENST00000531430 CYP4F22Q6NT55 531 aa12.29□□□□□ -0.44
NEDD8-206ENST00000531430 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
NEDD8-206ENST00000531430 NYXQ9GZU5 481 aa12.29□□□□□ -0.44
NEDD8-206ENST00000531430 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
NEDD8-206ENST00000531430 SCN4AP35499 1836 aa12.29□□□□□ -0.44
NEDD8-206ENST00000531430 SCN7AQ01118 1682 aa12.29□□□□□ -0.44
NEDD8-206ENST00000531430 TRAF5O00463 557 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 NEFMP07197 916 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 ECE1P42892 770 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 FAM161AQ3B820 660 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 KIF6Q6ZMV9 814 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
NEDD8-206ENST00000531430 CAPNS2Q96L46 248 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 ZBTB3Q9H5J0 574 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 CEMIPQ8WUJ3 1361 aa12.28□□□□□ -0.44
NEDD8-206ENST00000531430 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
NEDD8-206ENST00000531430 TTLL7Q6ZT98 887 aa12.27□□□□□ -0.45
NEDD8-206ENST00000531430 NIM1KQ8IY84 436 aa12.27□□□□□ -0.45
NEDD8-206ENST00000531430 PSMD1Q99460 953 aa12.27□□□□□ -0.45
NEDD8-206ENST00000531430 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
NEDD8-206ENST00000531430 SUSD4Q5VX71 490 aa12.26□□□□□ -0.45
NEDD8-206ENST00000531430 ZNF408Q9H9D4 720 aa12.26□□□□□ -0.45
NEDD8-206ENST00000531430 PPEF1O14829 653 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-206ENST00000531430 AOC2O75106 756 aa12.25□□□□□ -0.45
NEDD8-206ENST00000531430 SLC51AQ86UW1 340 aa12.25□□□□□ -0.45
NEDD8-206ENST00000531430 ERVV-1B6SEH8 477 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
NEDD8-206ENST00000531430 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-206ENST00000531430 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
NEDD8-206ENST00000531430 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-206ENST00000531430 PPP2R1AP30153 589 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 SCNN1DP51172 638 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 MLLT1Q03111 559 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-206ENST00000531430 AOC3Q16853 763 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 CST9Q5W186 159 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 MAP3K15Q6ZN16 1313 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 USP50Q70EL3 339 aaPredicted RBP12.24□□□□□ -0.45
NEDD8-206ENST00000531430 NLRP3Q96P20 1036 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 BCL2L13Q9BXK5 485 aa12.24□□□□□ -0.45
NEDD8-206ENST00000531430 ABCC12Q96J65 1359 aa12.23□□□□□ -0.45
NEDD8-206ENST00000531430 SLC34A2O95436 690 aa12.23□□□□□ -0.45
NEDD8-206ENST00000531430 EIF2S2P20042 333 aaKnown RBP12.23□□□□□ -0.45
NEDD8-206ENST00000531430 CRY2Q49AN0 593 aa12.23□□□□□ -0.45
NEDD8-206ENST00000531430 PPP1R42Q7Z4L9 355 aa12.23□□□□□ -0.45
NEDD8-206ENST00000531430 PNISRQ8TF01 805 aaKnown RBP12.23□□□□□ -0.45
NEDD8-206ENST00000531430 CRAMP1Q96RY5 1269 aa12.23□□□□□ -0.45
NEDD8-206ENST00000531430 RGL2O15211 777 aa12.22□□□□□ -0.45
NEDD8-206ENST00000531430 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-206ENST00000531430 GRIPAP1Q4V328 841 aa12.22□□□□□ -0.45
NEDD8-206ENST00000531430 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
NEDD8-206ENST00000531430 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
NEDD8-206ENST00000531430 GLIS2Q9BZE0 524 aaPredicted RBP12.22□□□□□ -0.45
NEDD8-206ENST00000531430 ADARB2Q9NS39 739 aaKnown RBP12.22□□□□□ -0.45
NEDD8-206ENST00000531430 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
NEDD8-206ENST00000531430 BCORQ6W2J9 1755 aa12.22□□□□□ -0.45
NEDD8-206ENST00000531430 ARFGEF2Q9Y6D5 1785 aa12.22□□□□□ -0.45
NEDD8-206ENST00000531430 RAD17O75943 681 aa12.21□□□□□ -0.45
NEDD8-206ENST00000531430 GMPSP49915 693 aaPredicted RBP12.21□□□□□ -0.45
NEDD8-206ENST00000531430 CXCL9Q07325 125 aa12.21□□□□□ -0.45
NEDD8-206ENST00000531430 C3orf67Q6ZVT6 689 aa12.21□□□□□ -0.45
NEDD8-206ENST00000531430 GPRC5DQ9NZD1 345 aa12.21□□□□□ -0.45
NEDD8-206ENST00000531430 ZNRF3Q9ULT6 936 aa12.21□□□□□ -0.45
NEDD8-206ENST00000531430 NPC1L1Q9UHC9 1359 aa12.2□□□□□ -0.46
NEDD8-206ENST00000531430 UBN2Q6ZU65 1347 aa12.2□□□□□ -0.46
NEDD8-206ENST00000531430 MAP2K2P36507 400 aa12.2□□□□□ -0.46
NEDD8-206ENST00000531430 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
NEDD8-206ENST00000531430 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
NEDD8-206ENST00000531430 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
NEDD8-206ENST00000531430 DPP8Q6V1X1 898 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-206ENST00000531430 MPNDQ8N594 471 aa12.2□□□□□ -0.46
NEDD8-206ENST00000531430 SUPT20HQ8NEM7 779 aa12.2□□□□□ -0.46
NEDD8-206ENST00000531430 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
NEDD8-206ENST00000531430 UTP14AQ9BVJ6 771 aaKnown RBP12.2□□□□□ -0.46
NEDD8-206ENST00000531430 NTSR2O95665 410 aa12.19□□□□□ -0.46
NEDD8-206ENST00000531430 DGKZQ13574 1117 aa12.19□□□□□ -0.46
NEDD8-206ENST00000531430 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
NEDD8-206ENST00000531430 ZNF34Q8IZ26 560 aa12.19□□□□□ -0.46
NEDD8-206ENST00000531430 ATP6V0A2Q9Y487 856 aa12.19□□□□□ -0.46
NEDD8-206ENST00000531430 H7C1D1 291 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 ANXA1P04083 346 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 HCLS1P14317 486 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-206ENST00000531430 TNIP1Q15025 636 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 PARP10Q53GL7 1025 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 RBM26Q5T8P6 1007 aaKnown RBP12.18□□□□□ -0.46
NEDD8-206ENST00000531430 SAPCD2Q86UD0 394 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 MCOLN1Q9GZU1 580 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 CNOT7Q9UIV1 285 aaKnown RBP12.18□□□□□ -0.46
NEDD8-206ENST00000531430 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
NEDD8-206ENST00000531430 COL4A5P29400 1685 aa12.17□□□□□ -0.46
NEDD8-206ENST00000531430 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
NEDD8-206ENST00000531430 BBOX1O75936 387 aa12.17□□□□□ -0.46
NEDD8-206ENST00000531430 DLK2Q6UY11 383 aa12.17□□□□□ -0.46
NEDD8-206ENST00000531430 DDX46Q7L014 1031 aaKnown RBP12.17□□□□□ -0.46
NEDD8-206ENST00000531430 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
NEDD8-206ENST00000531430 SP8Q8IXZ3 490 aa12.17□□□□□ -0.46
NEDD8-206ENST00000531430 ADAMTSL1Q8N6G6 1762 aa12.17□□□□□ -0.46
NEDD8-206ENST00000531430 NUP98P52948 1817 aa12.16□□□□□ -0.46
NEDD8-206ENST00000531430 ABCC4O15439 1325 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms