RNA–Protein interactions for RNA: ENST00000530673.1

VPS51-208, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-208ENST00000530673 NECTIN2Q92692 538 aa22.77■■□□□ 1.24
VPS51-208ENST00000530673 DDX21Q9NR30 783 aaKnown RBP eCLIP22.76■■□□□ 1.23
VPS51-208ENST00000530673 ANKRD36CQ5JPF3 1778 aa22.76■■□□□ 1.23
VPS51-208ENST00000530673 DDNO94850 711 aaPredicted RBP22.75■■□□□ 1.23
VPS51-208ENST00000530673 XAGE3Q8WTP9 111 aa22.75■■□□□ 1.23
VPS51-208ENST00000530673 CFAP44Q96MT7 982 aa22.75■■□□□ 1.23
VPS51-208ENST00000530673 SLC10A5Q5PT55 438 aa22.74■■□□□ 1.23
VPS51-208ENST00000530673 RPGRQ92834 1020 aaKnown RBP22.74■■□□□ 1.23
VPS51-208ENST00000530673 ZNF277Q9NRM2 450 aaPredicted RBP22.74■■□□□ 1.23
VPS51-208ENST00000530673 HOXB7P09629 217 aa22.73■■□□□ 1.23
VPS51-208ENST00000530673 HTRA3P83110 453 aa22.73■■□□□ 1.23
VPS51-208ENST00000530673 AIMP1Q12904 312 aaKnown RBP22.73■■□□□ 1.23
VPS51-208ENST00000530673 C3orf67Q6ZVT6 689 aa22.73■■□□□ 1.23
VPS51-208ENST00000530673 CRAMP1Q96RY5 1269 aa22.73■■□□□ 1.23
VPS51-208ENST00000530673 UTP14AQ9BVJ6 771 aaKnown RBP22.73■■□□□ 1.23
VPS51-208ENST00000530673 HSP90AB3PQ58FF7 597 aa22.72■■□□□ 1.23
VPS51-208ENST00000530673 CC2D2BQ6DHV5 1058 aa22.72■■□□□ 1.23
VPS51-208ENST00000530673 SYNE4Q8N205 404 aa22.72■■□□□ 1.23
VPS51-208ENST00000530673 RBM17Q96I25 401 aaKnown RBP22.72■■□□□ 1.23
VPS51-208ENST00000530673 PSMD1Q99460 953 aa22.72■■□□□ 1.23
VPS51-208ENST00000530673 CHPF2Q9P2E5 772 aa22.72■■□□□ 1.23
VPS51-208ENST00000530673 APAF1O14727 1248 aa22.71■■□□□ 1.23
VPS51-208ENST00000530673 ZNF853P0CG23 659 aa22.71■■□□□ 1.23
VPS51-208ENST00000530673 IARSP41252 1262 aaKnown RBP22.71■■□□□ 1.23
VPS51-208ENST00000530673 HDGFL1Q5TGJ6 251 aa22.71■■□□□ 1.23
VPS51-208ENST00000530673 NLRP10Q86W26 655 aa22.71■■□□□ 1.23
VPS51-208ENST00000530673 NLRP3Q96P20 1036 aa22.71■■□□□ 1.23
VPS51-208ENST00000530673 RNF123Q5XPI4 1314 aa22.71■■□□□ 1.23
VPS51-208ENST00000530673 TCIRG1Q13488 830 aa22.7■■□□□ 1.22
VPS51-208ENST00000530673 MBIPQ9NS73 344 aa22.7■■□□□ 1.22
VPS51-208ENST00000530673 ZNF541Q9H0D2 1346 aa22.69■■□□□ 1.22
VPS51-208ENST00000530673 L3MBTL3Q96JM7 780 aaPredicted RBP22.69■■□□□ 1.22
VPS51-208ENST00000530673 GRIPAP1Q4V328 841 aa22.68■■□□□ 1.22
VPS51-208ENST00000530673 DUSP27Q5VZP5 1158 aa22.68■■□□□ 1.22
VPS51-208ENST00000530673 KLRG1Q96E93 195 aa22.68■■□□□ 1.22
VPS51-208ENST00000530673 DBF4Q9UBU7 674 aaPredicted RBP22.68■■□□□ 1.22
VPS51-208ENST00000530673 SCN4AP35499 1836 aa22.68■■□□□ 1.22
VPS51-208ENST00000530673 FZD9O00144 591 aa22.67■■□□□ 1.22
VPS51-208ENST00000530673 PPEF1O14829 653 aaPredicted RBP22.67■■□□□ 1.22
VPS51-208ENST00000530673 SLC51AQ86UW1 340 aa22.67■■□□□ 1.22
VPS51-208ENST00000530673 PLBD2Q8NHP8 589 aa22.67■■□□□ 1.22
VPS51-208ENST00000530673 IFT57Q9NWB7 429 aa22.67■■□□□ 1.22
VPS51-208ENST00000530673 LAMB2P55268 1798 aa22.67■■□□□ 1.22
VPS51-208ENST00000530673 IQCA1LA6NCM1 817 aa22.66■■□□□ 1.22
VPS51-208ENST00000530673 COL4A5P29400 1685 aa22.65■■□□□ 1.22
VPS51-208ENST00000530673 POTEIP0CG38 1075 aa22.65■■□□□ 1.22
VPS51-208ENST00000530673 POTEJP0CG39 1038 aa22.65■■□□□ 1.22
VPS51-208ENST00000530673 GNAI1P63096 354 aa22.65■■□□□ 1.22
VPS51-208ENST00000530673 ANKRD13DQ6ZTN6 518 aa22.65■■□□□ 1.22
VPS51-208ENST00000530673 TRMT112Q9UI30 125 aaKnown RBP22.65■■□□□ 1.22
VPS51-208ENST00000530673 CALD1Q05682 793 aaKnown RBP22.64■■□□□ 1.21
VPS51-208ENST00000530673 CCDC184Q52MB2 194 aa22.64■■□□□ 1.21
VPS51-208ENST00000530673 CHADLQ6NUI6 762 aa22.64■■□□□ 1.21
VPS51-208ENST00000530673 JDP2Q8WYK2 163 aa22.64■■□□□ 1.21
VPS51-208ENST00000530673 TAF1DQ9H5J8 278 aaPredicted RBP22.64■■□□□ 1.21
VPS51-208ENST00000530673 HYPKQ9NX55 129 aa22.64■■□□□ 1.21
VPS51-208ENST00000530673 ABCC4O15439 1325 aa22.63■■□□□ 1.21
VPS51-208ENST00000530673 SH3TC1Q8TE82 1336 aa22.63■■□□□ 1.21
VPS51-208ENST00000530673 TCERG1O14776 1098 aaKnown RBP22.63■■□□□ 1.21
VPS51-208ENST00000530673 HCLS1P14317 486 aaPredicted RBP22.63■■□□□ 1.21
VPS51-208ENST00000530673 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
VPS51-208ENST00000530673 ISCA1Q9BUE6 129 aa22.63■■□□□ 1.21
VPS51-208ENST00000530673 ATP6V0A2Q9Y487 856 aa22.63■■□□□ 1.21
VPS51-208ENST00000530673 GPC2Q8N158 579 aa22.61■■□□□ 1.21
VPS51-208ENST00000530673 DDX60Q8IY21 1712 aaKnown RBP22.6■■□□□ 1.21
VPS51-208ENST00000530673 BBOX1O75936 387 aa22.6■■□□□ 1.21
VPS51-208ENST00000530673 LDHDQ86WU2 507 aa22.6■■□□□ 1.21
VPS51-208ENST00000530673 HACL1Q9UJ83 578 aa22.6■■□□□ 1.21
VPS51-208ENST00000530673 LARGE2Q8N3Y3 721 aa22.59■■□□□ 1.21
VPS51-208ENST00000530673 ZNF428Q96B54 188 aa22.59■■□□□ 1.21
VPS51-208ENST00000530673 TMX4Q9H1E5 349 aaPredicted RBP22.59■■□□□ 1.21
VPS51-208ENST00000530673 ADAMTSL1Q8N6G6 1762 aa22.58■■□□□ 1.21
VPS51-208ENST00000530673 ZNF316A6NFI3 1004 aaPredicted RBP22.58■■□□□ 1.21
VPS51-208ENST00000530673 ATP5J2-PTCD1G3V325 749 aa22.58■■□□□ 1.21
VPS51-208ENST00000530673 ELL2O00472 640 aaPredicted RBP22.58■■□□□ 1.21
VPS51-208ENST00000530673 EIF6P56537 245 aaKnown RBP22.58■■□□□ 1.21
VPS51-208ENST00000530673 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.21
VPS51-208ENST00000530673 DDX46Q7L014 1031 aaKnown RBP22.58■■□□□ 1.21
VPS51-208ENST00000530673 SP8Q8IXZ3 490 aa22.58■■□□□ 1.21
VPS51-208ENST00000530673 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
VPS51-208ENST00000530673 RTFDC1Q9BY42 306 aaPredicted RBP22.58■■□□□ 1.21
VPS51-208ENST00000530673 VPS33BQ9H267 617 aa22.58■■□□□ 1.21
VPS51-208ENST00000530673 EPHX2P34913 555 aa22.57■■□□□ 1.2
VPS51-208ENST00000530673 GRAPQ13588 217 aa22.57■■□□□ 1.2
VPS51-208ENST00000530673 GRAPLQ8TC17 118 aaPredicted RBP22.57■■□□□ 1.2
VPS51-208ENST00000530673 FAM89AQ96GI7 184 aa22.57■■□□□ 1.2
VPS51-208ENST00000530673 PHAXQ9H814 394 aaKnown RBP22.57■■□□□ 1.2
VPS51-208ENST00000530673 TAF1P21675 1872 aa22.56■■□□□ 1.2
VPS51-208ENST00000530673 PASKQ96RG2 1323 aa22.56■■□□□ 1.2
VPS51-208ENST00000530673 LTBP1Q14766 1721 aa22.55■■□□□ 1.2
VPS51-208ENST00000530673 PPIP5K2O43314 1243 aa22.55■■□□□ 1.2
VPS51-208ENST00000530673 SF3B3Q15393 1217 aaKnown RBP22.55■■□□□ 1.2
VPS51-208ENST00000530673 AOC3Q16853 763 aa22.55■■□□□ 1.2
VPS51-208ENST00000530673 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
VPS51-208ENST00000530673 EAPPQ56P03 285 aaPredicted RBP22.55■■□□□ 1.2
VPS51-208ENST00000530673 RIC3Q7Z5B4 369 aa22.55■■□□□ 1.2
VPS51-208ENST00000530673 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
VPS51-208ENST00000530673 SUPT20HQ8NEM7 779 aa22.55■■□□□ 1.2
VPS51-208ENST00000530673 GJA3Q9Y6H8 435 aa22.55■■□□□ 1.2
VPS51-208ENST00000530673 GOLGA2Q08379 1002 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms