RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 XKR5Q6UX68 686 aa9.8□□□□□ -0.84
CAPRIN1-208ENST00000530008 HSH2DQ96JZ2 352 aa9.8□□□□□ -0.84
CAPRIN1-208ENST00000530008 PUS7Q96PZ0 661 aaKnown RBP9.8□□□□□ -0.84
CAPRIN1-208ENST00000530008 FOXD3Q9UJU5 478 aaPredicted RBP9.8□□□□□ -0.84
CAPRIN1-208ENST00000530008 SPATA31C2B4DYI2 1134 aa9.79□□□□□ -0.84
CAPRIN1-208ENST00000530008 TNFRSF21O75509 655 aa9.79□□□□□ -0.84
CAPRIN1-208ENST00000530008 PHKA2P46019 1235 aa9.79□□□□□ -0.84
CAPRIN1-208ENST00000530008 IFFO2Q5TF58 517 aa9.79□□□□□ -0.84
CAPRIN1-208ENST00000530008 CCDC74AQ96AQ1 378 aa9.79□□□□□ -0.84
CAPRIN1-208ENST00000530008 C12orf49Q9H741 205 aa9.79□□□□□ -0.84
CAPRIN1-208ENST00000530008 GIPC1O14908 333 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 SPINT1O43278 529 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 TNNI2P48788 182 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 ARSDP51689 593 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 PI16Q6UXB8 463 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 CYP4X1Q8N118 509 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 SNX29Q8TEQ0 813 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 TSEN34Q9BSV6 310 aaKnown RBP9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 POLMQ9NP87 494 aaPredicted RBP9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 NLRP2Q9NX02 1062 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 ANKIB1Q9P2G1 1089 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 PRKAG2Q9UGJ0 569 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 FNDC3AQ9Y2H6 1198 aaKnown RBP9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
CAPRIN1-208ENST00000530008 INPP5BP32019 993 aa9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 NBPF10Q6P3W6 841 aaKnown RBP9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 BICDL1Q6ZP65 573 aa9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 ZNF438Q7Z4V0 828 aa9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 OSBPL7Q9BZF2 842 aa9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 DDX41Q9UJV9 622 aaKnown RBP9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 RTCBQ9Y3I0 505 aaKnown RBP9.77□□□□□ -0.85
CAPRIN1-208ENST00000530008 HMGB1P09429 215 aaKnown RBP9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 SMPD1P17405 629 aa9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 IRS1P35568 1242 aa9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 TRIP4Q15650 581 aaPredicted RBP9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 ZNF394Q53GI3 561 aa9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 PDE12Q6L8Q7 609 aaKnown RBP9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 ZNF654Q8IZM8 581 aa9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
CAPRIN1-208ENST00000530008 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 GDF9O60383 454 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 HSP90B1P14625 803 aaKnown RBP9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 ATP4AP20648 1035 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 CTSOP43234 321 aaPredicted RBP9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 RACK1P63244 317 aaKnown RBP9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 PTPN12Q05209 780 aaKnown RBP9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 POU4F2Q12837 409 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 BTLAQ7Z6A9 289 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 SPNS2Q8IVW8 549 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 CMTR1Q8N1G2 835 aaKnown RBP9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 NEUROD4Q9HD90 331 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 KCNMB2Q9Y691 235 aa9.75□□□□□ -0.85
CAPRIN1-208ENST00000530008 SMARCA5O60264 1052 aaPredicted RBP9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 PHACTR2O75167 634 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 DPH6Q7L8W6 267 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 HS2ST1Q7LGA3 356 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 USP48Q86UV5 1035 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 LINC00528Q8N1L1 170 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 GMLQ99445 158 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 INPP5FQ9Y2H2 1132 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 PCDHGB7Q9Y5F8 929 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
CAPRIN1-208ENST00000530008 DHX38Q92620 1227 aaKnown RBP9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 HPS1Q92902 700 aa9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 ZIC5Q96T25 663 aa9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 DNAJC2Q99543 621 aaKnown RBP9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 SRA1Q9HD15 236 aaKnown RBP9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 TMEM63CQ9P1W3 806 aa9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 GGT7Q9UJ14 662 aa9.73□□□□□ -0.85
CAPRIN1-208ENST00000530008 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
CAPRIN1-208ENST00000530008 DNAJA1P31689 397 aaKnown RBP9.72□□□□□ -0.85
CAPRIN1-208ENST00000530008 TAF1CQ15572 869 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-208ENST00000530008 WDR44Q5JSH3 913 aa9.72□□□□□ -0.85
CAPRIN1-208ENST00000530008 MEI1Q5TIA1 1274 aa9.72□□□□□ -0.85
CAPRIN1-208ENST00000530008 LRRC69Q6ZNQ3 347 aa9.72□□□□□ -0.85
CAPRIN1-208ENST00000530008 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
CAPRIN1-208ENST00000530008 UPP2O95045 317 aa9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 USP17L7P0C7H9 530 aa9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 GTF2F1P35269 517 aaKnown RBP eCLIP9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 ARSJQ5FYB0 599 aaPredicted RBP9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 PRICKLE2Q7Z3G6 844 aa9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 RNF217Q8TC41 542 aa9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 ARMC5Q96C12 935 aa9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 NPHS2Q9NP85 383 aa9.71□□□□□ -0.86
CAPRIN1-208ENST00000530008 POLR3DP05423 398 aaPredicted RBP9.7□□□□□ -0.86
CAPRIN1-208ENST00000530008 MSX1P28360 303 aa9.7□□□□□ -0.86
CAPRIN1-208ENST00000530008 GRNP28799 593 aaKnown RBP9.7□□□□□ -0.86
CAPRIN1-208ENST00000530008 ST13P50502 369 aaKnown RBP9.7□□□□□ -0.86
CAPRIN1-208ENST00000530008 ARID5AQ03989 594 aa9.7□□□□□ -0.86
CAPRIN1-208ENST00000530008 GALNT12Q8IXK2 581 aa9.7□□□□□ -0.86
CAPRIN1-208ENST00000530008 SRCIN1Q9C0H9 1055 aa9.7□□□□□ -0.86
CAPRIN1-208ENST00000530008 CHRDQ9H2X0 955 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms