RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
HIF3A-212ENST00000529205 PAXIP1Q6ZW49 1069 aaPredicted RBP17.94■□□□□ 0.46
HIF3A-212ENST00000529205 NGEFQ8N5V2 710 aa17.94■□□□□ 0.46
HIF3A-212ENST00000529205 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
HIF3A-212ENST00000529205 DDX21Q9NR30 783 aaKnown RBP eCLIP17.94■□□□□ 0.46
HIF3A-212ENST00000529205 DCTN1Q14203 1278 aa17.93■□□□□ 0.46
HIF3A-212ENST00000529205 CRY2Q49AN0 593 aa17.93■□□□□ 0.46
HIF3A-212ENST00000529205 LARGE2Q8N3Y3 721 aa17.93■□□□□ 0.46
HIF3A-212ENST00000529205 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
HIF3A-212ENST00000529205 HSPA8P11142 646 aaKnown RBP17.92■□□□□ 0.46
HIF3A-212ENST00000529205 NUTM1Q86Y26 1132 aa17.92■□□□□ 0.46
HIF3A-212ENST00000529205 USP50Q70EL3 339 aaPredicted RBP17.91■□□□□ 0.46
HIF3A-212ENST00000529205 ABHD8Q96I13 439 aa17.91■□□□□ 0.46
HIF3A-212ENST00000529205 ADAMTSL1Q8N6G6 1762 aa17.91■□□□□ 0.46
HIF3A-212ENST00000529205 HOXA10P31260 410 aaPredicted RBP17.9■□□□□ 0.46
HIF3A-212ENST00000529205 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
HIF3A-212ENST00000529205 RRP7AQ9Y3A4 280 aaKnown RBP17.9■□□□□ 0.46
HIF3A-212ENST00000529205 MAP3K15Q6ZN16 1313 aa17.9■□□□□ 0.46
HIF3A-212ENST00000529205 GRM1Q13255 1194 aa17.89■□□□□ 0.45
HIF3A-212ENST00000529205 CAPNS2Q96L46 248 aa17.89■□□□□ 0.45
HIF3A-212ENST00000529205 CRAMP1Q96RY5 1269 aa17.89■□□□□ 0.45
HIF3A-212ENST00000529205 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
HIF3A-212ENST00000529205 PPEF1O14829 653 aaPredicted RBP17.88■□□□□ 0.45
HIF3A-212ENST00000529205 PPP2R1AP30153 589 aa17.88■□□□□ 0.45
HIF3A-212ENST00000529205 EPS15P42566 896 aa17.88■□□□□ 0.45
HIF3A-212ENST00000529205 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
HIF3A-212ENST00000529205 GPR101Q96P66 508 aaPredicted RBP17.88■□□□□ 0.45
HIF3A-212ENST00000529205 VPS33BQ9H267 617 aa17.88■□□□□ 0.45
HIF3A-212ENST00000529205 TCERG1O14776 1098 aaKnown RBP17.87■□□□□ 0.45
HIF3A-212ENST00000529205 MYL6BP14649 208 aa17.87■□□□□ 0.45
HIF3A-212ENST00000529205 GPTP24298 496 aa17.87■□□□□ 0.45
HIF3A-212ENST00000529205 SCNN1DP51172 638 aa17.87■□□□□ 0.45
HIF3A-212ENST00000529205 NLRP3Q96P20 1036 aa17.87■□□□□ 0.45
HIF3A-212ENST00000529205 ABCC12Q96J65 1359 aa17.87■□□□□ 0.45
HIF3A-212ENST00000529205 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
HIF3A-212ENST00000529205 RIC1Q4ADV7 1423 aa17.87■□□□□ 0.45
HIF3A-212ENST00000529205 PPIP5K2O43314 1243 aa17.86■□□□□ 0.45
HIF3A-212ENST00000529205 SUPT20HQ8NEM7 779 aa17.86■□□□□ 0.45
HIF3A-212ENST00000529205 ZBTB3Q9H5J0 574 aa17.86■□□□□ 0.45
HIF3A-212ENST00000529205 ADARB2Q9NS39 739 aaKnown RBP17.86■□□□□ 0.45
HIF3A-212ENST00000529205 MAP2K2P36507 400 aa17.85■□□□□ 0.45
HIF3A-212ENST00000529205 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
HIF3A-212ENST00000529205 SUSD4Q5VX71 490 aa17.85■□□□□ 0.45
HIF3A-212ENST00000529205 CYP4F22Q6NT55 531 aa17.85■□□□□ 0.45
HIF3A-212ENST00000529205 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
HIF3A-212ENST00000529205 SNED1Q8TER0 1413 aa17.85■□□□□ 0.45
HIF3A-212ENST00000529205 TLL2Q9Y6L7 1015 aa17.85■□□□□ 0.45
HIF3A-212ENST00000529205 CCDC85CA6NKD9 419 aa17.84■□□□□ 0.45
HIF3A-212ENST00000529205 EIF4A1P60842 406 aaKnown RBP17.84■□□□□ 0.45
HIF3A-212ENST00000529205 GIGYF2Q6Y7W6 1299 aaKnown RBP17.84■□□□□ 0.45
HIF3A-212ENST00000529205 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
HIF3A-212ENST00000529205 LAMB4A4D0S4 1761 aa17.84■□□□□ 0.45
HIF3A-212ENST00000529205 FAM161AQ3B820 660 aa17.83■□□□□ 0.44
HIF3A-212ENST00000529205 ZNF34Q8IZ26 560 aa17.83■□□□□ 0.44
HIF3A-212ENST00000529205 GPRC5DQ9NZD1 345 aa17.83■□□□□ 0.44
HIF3A-212ENST00000529205 ZNRF3Q9ULT6 936 aa17.83■□□□□ 0.44
HIF3A-212ENST00000529205 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
HIF3A-212ENST00000529205 UBN2Q6ZU65 1347 aa17.82■□□□□ 0.44
HIF3A-212ENST00000529205 TRAF5O00463 557 aa17.82■□□□□ 0.44
HIF3A-212ENST00000529205 CA12O43570 354 aa17.82■□□□□ 0.44
HIF3A-212ENST00000529205 MLLT1Q03111 559 aaPredicted RBP17.82■□□□□ 0.44
HIF3A-212ENST00000529205 FMR1Q06787 632 aaKnown RBP eCLIP17.82■□□□□ 0.44
HIF3A-212ENST00000529205 AOC3Q16853 763 aa17.82■□□□□ 0.44
HIF3A-212ENST00000529205 CST9Q5W186 159 aa17.82■□□□□ 0.44
HIF3A-212ENST00000529205 ATP6V0A2Q9Y487 856 aa17.82■□□□□ 0.44
HIF3A-212ENST00000529205 NTSR2O95665 410 aa17.81■□□□□ 0.44
HIF3A-212ENST00000529205 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
HIF3A-212ENST00000529205 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
HIF3A-212ENST00000529205 BBOX1O75936 387 aa17.8■□□□□ 0.44
HIF3A-212ENST00000529205 CELF2O95319 508 aaKnown RBP17.8■□□□□ 0.44
HIF3A-212ENST00000529205 TNIP1Q15025 636 aa17.8■□□□□ 0.44
HIF3A-212ENST00000529205 DPP8Q6V1X1 898 aaPredicted RBP17.8■□□□□ 0.44
HIF3A-212ENST00000529205 COL4A5P29400 1685 aa17.8■□□□□ 0.44
HIF3A-212ENST00000529205 NUP98P52948 1817 aa17.79■□□□□ 0.44
HIF3A-212ENST00000529205 CDHR2Q9BYE9 1310 aa17.79■□□□□ 0.44
HIF3A-212ENST00000529205 CXCL9Q07325 125 aa17.79■□□□□ 0.44
HIF3A-212ENST00000529205 CIAPIN1Q6FI81 312 aa17.79■□□□□ 0.44
HIF3A-212ENST00000529205 SAPCD2Q86UD0 394 aa17.79■□□□□ 0.44
HIF3A-212ENST00000529205 HHIPL1Q96JK4 782 aa17.79■□□□□ 0.44
HIF3A-212ENST00000529205 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 HSP90AB3PQ58FF7 597 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 SLC10A5Q5PT55 438 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 SP8Q8IXZ3 490 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 MPNDQ8N594 471 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 ZC3H15Q8WU90 426 aaKnown RBP17.78■□□□□ 0.44
HIF3A-212ENST00000529205 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
HIF3A-212ENST00000529205 RTFDC1Q9BY42 306 aaPredicted RBP17.78■□□□□ 0.44
HIF3A-212ENST00000529205 THSD7BQ9C0I4 1608 aa17.77■□□□□ 0.44
HIF3A-212ENST00000529205 AOC2O75106 756 aa17.77■□□□□ 0.44
HIF3A-212ENST00000529205 SLC34A2O95436 690 aa17.77■□□□□ 0.44
HIF3A-212ENST00000529205 GMPSP49915 693 aaPredicted RBP17.77■□□□□ 0.44
HIF3A-212ENST00000529205 CDC37L1Q7L3B6 337 aa17.77■□□□□ 0.44
HIF3A-212ENST00000529205 ZNF408Q9H9D4 720 aa17.77■□□□□ 0.44
HIF3A-212ENST00000529205 ABCC4O15439 1325 aa17.76■□□□□ 0.43
HIF3A-212ENST00000529205 H7C1D1 291 aa17.76■□□□□ 0.43
HIF3A-212ENST00000529205 EIF2S2P20042 333 aaKnown RBP17.76■□□□□ 0.43
HIF3A-212ENST00000529205 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
HIF3A-212ENST00000529205 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms