RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 HOXA10P31260 410 aaPredicted RBP20.37■□□□□ 0.85
CLNS1A-210ENST00000528364 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
CLNS1A-210ENST00000528364 AIMP1Q12904 312 aaKnown RBP20.37■□□□□ 0.85
CLNS1A-210ENST00000528364 COPS6Q7L5N1 327 aa20.37■□□□□ 0.85
CLNS1A-210ENST00000528364 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
CLNS1A-210ENST00000528364 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
CLNS1A-210ENST00000528364 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
CLNS1A-210ENST00000528364 CHL1O00533 1208 aa20.36■□□□□ 0.85
CLNS1A-210ENST00000528364 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
CLNS1A-210ENST00000528364 XAGE3Q8WTP9 111 aa20.36■□□□□ 0.85
CLNS1A-210ENST00000528364 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
CLNS1A-210ENST00000528364 L3MBTL3Q96JM7 780 aaPredicted RBP20.36■□□□□ 0.85
CLNS1A-210ENST00000528364 TAF1DQ9H5J8 278 aaPredicted RBP20.36■□□□□ 0.85
CLNS1A-210ENST00000528364 PPP1R42Q7Z4L9 355 aa20.35■□□□□ 0.85
CLNS1A-210ENST00000528364 ZNF428Q96B54 188 aa20.35■□□□□ 0.85
CLNS1A-210ENST00000528364 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
CLNS1A-210ENST00000528364 FZD9O00144 591 aa20.34■□□□□ 0.85
CLNS1A-210ENST00000528364 CRAMP1Q96RY5 1269 aa20.34■□□□□ 0.85
CLNS1A-210ENST00000528364 UTP14AQ9BVJ6 771 aaKnown RBP20.34■□□□□ 0.85
CLNS1A-210ENST00000528364 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
CLNS1A-210ENST00000528364 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
CLNS1A-210ENST00000528364 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
CLNS1A-210ENST00000528364 WDR43Q15061 677 aaKnown RBP eCLIP20.33■□□□□ 0.85
CLNS1A-210ENST00000528364 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
CLNS1A-210ENST00000528364 SLC10A5Q5PT55 438 aa20.33■□□□□ 0.85
CLNS1A-210ENST00000528364 PSMD1Q99460 953 aa20.33■□□□□ 0.85
CLNS1A-210ENST00000528364 EAPPQ56P03 285 aaPredicted RBP20.32■□□□□ 0.84
CLNS1A-210ENST00000528364 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
CLNS1A-210ENST00000528364 NLRP3Q96P20 1036 aa20.32■□□□□ 0.84
CLNS1A-210ENST00000528364 PPEF1O14829 653 aaPredicted RBP20.31■□□□□ 0.84
CLNS1A-210ENST00000528364 HCLS1P14317 486 aaPredicted RBP20.31■□□□□ 0.84
CLNS1A-210ENST00000528364 COL13A1Q5TAT6 717 aaPredicted RBP20.31■□□□□ 0.84
CLNS1A-210ENST00000528364 HACL1Q9UJ83 578 aa20.31■□□□□ 0.84
CLNS1A-210ENST00000528364 RNF123Q5XPI4 1314 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 RIC1Q4ADV7 1423 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 COL4A5P29400 1685 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 LDHDQ86WU2 507 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 JDP2Q8WYK2 163 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 DDX21Q9NR30 783 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 CHPF2Q9P2E5 772 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 CLEC11AQ9Y240 323 aa20.3■□□□□ 0.84
CLNS1A-210ENST00000528364 EPHX2P34913 555 aa20.29■□□□□ 0.84
CLNS1A-210ENST00000528364 TCIRG1Q13488 830 aa20.29■□□□□ 0.84
CLNS1A-210ENST00000528364 MKRN1Q9UHC7 482 aaKnown RBP20.29■□□□□ 0.84
CLNS1A-210ENST00000528364 GJA3Q9Y6H8 435 aa20.29■□□□□ 0.84
CLNS1A-210ENST00000528364 SCN4AP35499 1836 aa20.28■□□□□ 0.84
CLNS1A-210ENST00000528364 ITGBL1O95965 494 aaPredicted RBP20.28■□□□□ 0.84
CLNS1A-210ENST00000528364 LARGE2Q8N3Y3 721 aa20.28■□□□□ 0.84
CLNS1A-210ENST00000528364 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
CLNS1A-210ENST00000528364 PASKQ96RG2 1323 aa20.27■□□□□ 0.84
CLNS1A-210ENST00000528364 GPC2Q8N158 579 aa20.27■□□□□ 0.84
CLNS1A-210ENST00000528364 CREBZFQ9NS37 354 aa20.27■□□□□ 0.84
CLNS1A-210ENST00000528364 TRMT112Q9UI30 125 aaKnown RBP20.27■□□□□ 0.84
CLNS1A-210ENST00000528364 ABCC4O15439 1325 aa20.27■□□□□ 0.83
CLNS1A-210ENST00000528364 EIF6P56537 245 aaKnown RBP20.26■□□□□ 0.83
CLNS1A-210ENST00000528364 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
CLNS1A-210ENST00000528364 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
CLNS1A-210ENST00000528364 MAP1SQ66K74 1059 aaPredicted RBP20.26■□□□□ 0.83
CLNS1A-210ENST00000528364 ATP6V0A2Q9Y487 856 aa20.26■□□□□ 0.83
CLNS1A-210ENST00000528364 HSPA1AP0DMV8 641 aaKnown RBP20.25■□□□□ 0.83
CLNS1A-210ENST00000528364 HSPA1BP0DMV9 641 aaKnown RBP20.25■□□□□ 0.83
CLNS1A-210ENST00000528364 DUSP27Q5VZP5 1158 aa20.25■□□□□ 0.83
CLNS1A-210ENST00000528364 MBIPQ9NS73 344 aa20.25■□□□□ 0.83
CLNS1A-210ENST00000528364 APAF1O14727 1248 aa20.24■□□□□ 0.83
CLNS1A-210ENST00000528364 EPS15P42566 896 aa20.24■□□□□ 0.83
CLNS1A-210ENST00000528364 AOC3Q16853 763 aa20.24■□□□□ 0.83
CLNS1A-210ENST00000528364 GRIPAP1Q4V328 841 aa20.24■□□□□ 0.83
CLNS1A-210ENST00000528364 CFAP44Q96MT7 982 aa20.24■□□□□ 0.83
CLNS1A-210ENST00000528364 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
CLNS1A-210ENST00000528364 PPIP5K2O43314 1243 aa20.23■□□□□ 0.83
CLNS1A-210ENST00000528364 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
CLNS1A-210ENST00000528364 CNTROBQ8N137 903 aa20.23■□□□□ 0.83
CLNS1A-210ENST00000528364 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
CLNS1A-210ENST00000528364 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
CLNS1A-210ENST00000528364 ELL2O00472 640 aaPredicted RBP20.22■□□□□ 0.83
CLNS1A-210ENST00000528364 BBOX1O75936 387 aa20.22■□□□□ 0.83
CLNS1A-210ENST00000528364 ZNF853P0CG23 659 aa20.22■□□□□ 0.83
CLNS1A-210ENST00000528364 PNMA8AQ86V59 439 aaPredicted RBP20.22■□□□□ 0.83
CLNS1A-210ENST00000528364 SP8Q8IXZ3 490 aa20.22■□□□□ 0.83
CLNS1A-210ENST00000528364 NIM1KQ8IY84 436 aa20.22■□□□□ 0.83
CLNS1A-210ENST00000528364 TAF1P21675 1872 aa20.22■□□□□ 0.83
CLNS1A-210ENST00000528364 SCNN1DP51172 638 aa20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 FMR1Q06787 632 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 DDX46Q7L014 1031 aaKnown RBP20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
CLNS1A-210ENST00000528364 TMEM88BA6NKF7 163 aa20.2■□□□□ 0.82
CLNS1A-210ENST00000528364 HOXB7P09629 217 aa20.2■□□□□ 0.82
CLNS1A-210ENST00000528364 MPNDQ8N594 471 aa20.2■□□□□ 0.82
CLNS1A-210ENST00000528364 RTFDC1Q9BY42 306 aaPredicted RBP20.2■□□□□ 0.82
CLNS1A-210ENST00000528364 LAMB2P55268 1798 aa20.2■□□□□ 0.82
CLNS1A-210ENST00000528364 ANKRD36CQ5JPF3 1778 aa20.2■□□□□ 0.82
CLNS1A-210ENST00000528364 LTBP1Q14766 1721 aa20.19■□□□□ 0.82
CLNS1A-210ENST00000528364 ADAMTSL1Q8N6G6 1762 aa20.19■□□□□ 0.82
CLNS1A-210ENST00000528364 LMOD1P29536 600 aaPredicted RBP20.19■□□□□ 0.82
CLNS1A-210ENST00000528364 CXCL9Q07325 125 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms