RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 ITGBL1O95965 494 aaPredicted RBP20.75■□□□□ 0.91
CTTN-212ENST00000527962 CNTROBQ8N137 903 aa20.75■□□□□ 0.91
CTTN-212ENST00000527962 ZBTB3Q9H5J0 574 aa20.75■□□□□ 0.91
CTTN-212ENST00000527962 RNF123Q5XPI4 1314 aa20.75■□□□□ 0.91
CTTN-212ENST00000527962 SCN4AP35499 1836 aa20.74■□□□□ 0.91
CTTN-212ENST00000527962 GPTP24298 496 aa20.74■□□□□ 0.91
CTTN-212ENST00000527962 PARP10Q53GL7 1025 aa20.74■□□□□ 0.91
CTTN-212ENST00000527962 CRAMP1Q96RY5 1269 aa20.74■□□□□ 0.91
CTTN-212ENST00000527962 TTLL7Q6ZT98 887 aa20.73■□□□□ 0.91
CTTN-212ENST00000527962 LARGE2Q8N3Y3 721 aa20.73■□□□□ 0.91
CTTN-212ENST00000527962 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
CTTN-212ENST00000527962 GJA3Q9Y6H8 435 aa20.73■□□□□ 0.91
CTTN-212ENST00000527962 SUSD4Q5VX71 490 aa20.72■□□□□ 0.91
CTTN-212ENST00000527962 GIGYF2Q6Y7W6 1299 aaKnown RBP20.72■□□□□ 0.91
CTTN-212ENST00000527962 ZNF34Q8IZ26 560 aa20.72■□□□□ 0.91
CTTN-212ENST00000527962 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
CTTN-212ENST00000527962 TSPYL4Q9UJ04 414 aa20.72■□□□□ 0.91
CTTN-212ENST00000527962 ABCC12Q96J65 1359 aa20.72■□□□□ 0.91
CTTN-212ENST00000527962 RIC1Q4ADV7 1423 aa20.71■□□□□ 0.91
CTTN-212ENST00000527962 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
CTTN-212ENST00000527962 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
CTTN-212ENST00000527962 CTCFP49711 727 aaPredicted RBP20.71■□□□□ 0.91
CTTN-212ENST00000527962 VEGFBP49765 207 aa20.71■□□□□ 0.91
CTTN-212ENST00000527962 DEFB115Q30KQ5 88 aa20.71■□□□□ 0.91
CTTN-212ENST00000527962 MAP1SQ66K74 1059 aaPredicted RBP20.71■□□□□ 0.91
CTTN-212ENST00000527962 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
CTTN-212ENST00000527962 PRDM10Q9NQV6 1147 aa20.71■□□□□ 0.91
CTTN-212ENST00000527962 VPS33BQ9H267 617 aa20.7■□□□□ 0.9
CTTN-212ENST00000527962 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
CTTN-212ENST00000527962 LMOD3Q0VAK6 560 aa20.69■□□□□ 0.9
CTTN-212ENST00000527962 NIM1KQ8IY84 436 aa20.69■□□□□ 0.9
CTTN-212ENST00000527962 UTP14AQ9BVJ6 771 aaKnown RBP20.69■□□□□ 0.9
CTTN-212ENST00000527962 ABT1Q9ULW3 272 aaKnown RBP20.69■□□□□ 0.9
CTTN-212ENST00000527962 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
CTTN-212ENST00000527962 RASSF10A6NK89 507 aa20.68■□□□□ 0.9
CTTN-212ENST00000527962 FOXN1O15353 648 aa20.68■□□□□ 0.9
CTTN-212ENST00000527962 NTSR2O95665 410 aa20.68■□□□□ 0.9
CTTN-212ENST00000527962 SUPT20HQ8NEM7 779 aa20.68■□□□□ 0.9
CTTN-212ENST00000527962 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
CTTN-212ENST00000527962 TCERG1O14776 1098 aaKnown RBP20.67■□□□□ 0.9
CTTN-212ENST00000527962 EIF2S2P20042 333 aaKnown RBP20.67■□□□□ 0.9
CTTN-212ENST00000527962 RIPK4P57078 832 aa20.67■□□□□ 0.9
CTTN-212ENST00000527962 MAP2K1Q02750 393 aaPredicted RBP20.67■□□□□ 0.9
CTTN-212ENST00000527962 HSP90AB3PQ58FF7 597 aa20.67■□□□□ 0.9
CTTN-212ENST00000527962 USP50Q70EL3 339 aaPredicted RBP20.67■□□□□ 0.9
CTTN-212ENST00000527962 PPIP5K2O43314 1243 aa20.66■□□□□ 0.9
CTTN-212ENST00000527962 DDX21Q9NR30 783 aaKnown RBP eCLIP20.66■□□□□ 0.9
CTTN-212ENST00000527962 ATP6V0A2Q9Y487 856 aa20.66■□□□□ 0.9
CTTN-212ENST00000527962 SNED1Q8TER0 1413 aa20.65■□□□□ 0.9
CTTN-212ENST00000527962 SLC10A5Q5PT55 438 aa20.65■□□□□ 0.9
CTTN-212ENST00000527962 WBP1LQ9NX94 342 aa20.65■□□□□ 0.9
CTTN-212ENST00000527962 BBOX1O75936 387 aa20.64■□□□□ 0.89
CTTN-212ENST00000527962 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
CTTN-212ENST00000527962 EPS15P42566 896 aa20.63■□□□□ 0.89
CTTN-212ENST00000527962 ECE1P42892 770 aa20.63■□□□□ 0.89
CTTN-212ENST00000527962 RALBP1Q15311 655 aa20.63■□□□□ 0.89
CTTN-212ENST00000527962 BEGAINQ9BUH8 593 aa20.63■□□□□ 0.89
CTTN-212ENST00000527962 KDM3BQ7LBC6 1761 aa20.63■□□□□ 0.89
CTTN-212ENST00000527962 SCNN1DP51172 638 aa20.62■□□□□ 0.89
CTTN-212ENST00000527962 DPP8Q6V1X1 898 aaPredicted RBP20.62■□□□□ 0.89
CTTN-212ENST00000527962 PAXIP1Q6ZW49 1069 aaPredicted RBP20.62■□□□□ 0.89
CTTN-212ENST00000527962 ADARB2Q9NS39 739 aaKnown RBP20.62■□□□□ 0.89
CTTN-212ENST00000527962 ZNRF3Q9ULT6 936 aa20.62■□□□□ 0.89
CTTN-212ENST00000527962 AOC3Q16853 763 aa20.61■□□□□ 0.89
CTTN-212ENST00000527962 DDX46Q7L014 1031 aaKnown RBP20.61■□□□□ 0.89
CTTN-212ENST00000527962 SP8Q8IXZ3 490 aa20.61■□□□□ 0.89
CTTN-212ENST00000527962 NUP98P52948 1817 aa20.6■□□□□ 0.89
CTTN-212ENST00000527962 LBX1P52954 281 aa20.6■□□□□ 0.89
CTTN-212ENST00000527962 PDIA6Q15084 440 aa20.6■□□□□ 0.89
CTTN-212ENST00000527962 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
CTTN-212ENST00000527962 COPS6Q7L5N1 327 aa20.6■□□□□ 0.89
CTTN-212ENST00000527962 MPNDQ8N594 471 aa20.6■□□□□ 0.89
CTTN-212ENST00000527962 RTFDC1Q9BY42 306 aaPredicted RBP20.6■□□□□ 0.89
CTTN-212ENST00000527962 TRMT112Q9UI30 125 aaKnown RBP20.6■□□□□ 0.89
CTTN-212ENST00000527962 ABCC4O15439 1325 aa20.59■□□□□ 0.89
CTTN-212ENST00000527962 TMPOP42166 694 aaKnown RBP20.59■□□□□ 0.89
CTTN-212ENST00000527962 AIMP1Q12904 312 aaKnown RBP20.59■□□□□ 0.89
CTTN-212ENST00000527962 TNIP1Q15025 636 aa20.59■□□□□ 0.89
CTTN-212ENST00000527962 TMC4Q7Z404 712 aa20.59■□□□□ 0.89
CTTN-212ENST00000527962 LRP10Q7Z4F1 713 aa20.59■□□□□ 0.89
CTTN-212ENST00000527962 GPRC5DQ9NZD1 345 aa20.59■□□□□ 0.89
CTTN-212ENST00000527962 ADAMTSL1Q8N6G6 1762 aa20.59■□□□□ 0.89
CTTN-212ENST00000527962 TCIRG1Q13488 830 aa20.58■□□□□ 0.89
CTTN-212ENST00000527962 XAGE3Q8WTP9 111 aa20.58■□□□□ 0.89
CTTN-212ENST00000527962 SH3TC1Q8TE82 1336 aa20.57■□□□□ 0.88
CTTN-212ENST00000527962 CDHR2Q9BYE9 1310 aa20.57■□□□□ 0.88
CTTN-212ENST00000527962 CXCL9Q07325 125 aa20.57■□□□□ 0.88
CTTN-212ENST00000527962 PROSER3Q2NL68 480 aa20.57■□□□□ 0.88
CTTN-212ENST00000527962 NLRP10Q86W26 655 aa20.57■□□□□ 0.88
CTTN-212ENST00000527962 BCL2L13Q9BXK5 485 aa20.57■□□□□ 0.88
CTTN-212ENST00000527962 DLG5Q8TDM6 1919 aa20.57■□□□□ 0.88
CTTN-212ENST00000527962 ANXA1P04083 346 aa20.56■□□□□ 0.88
CTTN-212ENST00000527962 HCLS1P14317 486 aaPredicted RBP20.56■□□□□ 0.88
CTTN-212ENST00000527962 CIAPIN1Q6FI81 312 aa20.56■□□□□ 0.88
CTTN-212ENST00000527962 NECTIN2Q92692 538 aa20.56■□□□□ 0.88
CTTN-212ENST00000527962 CAPNS2Q96L46 248 aa20.56■□□□□ 0.88
CTTN-212ENST00000527962 GPR101Q96P66 508 aaPredicted RBP20.56■□□□□ 0.88
CTTN-212ENST00000527962 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
CTTN-212ENST00000527962 GRM1Q13255 1194 aa20.55■□□□□ 0.88
CTTN-212ENST00000527962 GRAPQ13588 217 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms