RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 ANXA1P04083 346 aa11.16□□□□□ -0.62
CHD7-206ENST00000527900 EIF2S2P20042 333 aaKnown RBP11.16□□□□□ -0.62
CHD7-206ENST00000527900 GPTP24298 496 aa11.16□□□□□ -0.62
CHD7-206ENST00000527900 HTRA3P83110 453 aa11.16□□□□□ -0.62
CHD7-206ENST00000527900 KRT24Q2M2I5 525 aa11.16□□□□□ -0.62
CHD7-206ENST00000527900 RTKN2Q8IZC4 609 aa11.16□□□□□ -0.62
CHD7-206ENST00000527900 ANKRD36CQ5JPF3 1778 aa11.16□□□□□ -0.62
CHD7-206ENST00000527900 ZNF853P0CG23 659 aa11.15□□□□□ -0.62
CHD7-206ENST00000527900 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.62
CHD7-206ENST00000527900 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
CHD7-206ENST00000527900 PARP10Q53GL7 1025 aa11.15□□□□□ -0.62
CHD7-206ENST00000527900 C3orf67Q6ZVT6 689 aa11.15□□□□□ -0.62
CHD7-206ENST00000527900 JMYQ8N9B5 988 aa11.15□□□□□ -0.62
CHD7-206ENST00000527900 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
CHD7-206ENST00000527900 CRAMP1Q96RY5 1269 aa11.15□□□□□ -0.62
CHD7-206ENST00000527900 DDX21Q9NR30 783 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHD7-206ENST00000527900 SCN4AP35499 1836 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 FZD9O00144 591 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHD7-206ENST00000527900 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 KLRG1Q96E93 195 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 PSMD1Q99460 953 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 ZNF277Q9NRM2 450 aaPredicted RBP11.14□□□□□ -0.63
CHD7-206ENST00000527900 COL4A5P29400 1685 aa11.14□□□□□ -0.63
CHD7-206ENST00000527900 LAMB2P55268 1798 aa11.13□□□□□ -0.63
CHD7-206ENST00000527900 HOXB7P09629 217 aa11.13□□□□□ -0.63
CHD7-206ENST00000527900 IARSP41252 1262 aaKnown RBP11.13□□□□□ -0.63
CHD7-206ENST00000527900 TCIRG1Q13488 830 aa11.13□□□□□ -0.63
CHD7-206ENST00000527900 CC2D2BQ6DHV5 1058 aa11.13□□□□□ -0.63
CHD7-206ENST00000527900 SLC51AQ86UW1 340 aa11.13□□□□□ -0.63
CHD7-206ENST00000527900 XAGE3Q8WTP9 111 aa11.13□□□□□ -0.63
CHD7-206ENST00000527900 CFAP44Q96MT7 982 aa11.13□□□□□ -0.63
CHD7-206ENST00000527900 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
CHD7-206ENST00000527900 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
CHD7-206ENST00000527900 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
CHD7-206ENST00000527900 GRIPAP1Q4V328 841 aa11.12□□□□□ -0.63
CHD7-206ENST00000527900 NLRP10Q86W26 655 aa11.12□□□□□ -0.63
CHD7-206ENST00000527900 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
CHD7-206ENST00000527900 UTP14AQ9BVJ6 771 aaKnown RBP11.12□□□□□ -0.63
CHD7-206ENST00000527900 RNF123Q5XPI4 1314 aa11.11□□□□□ -0.63
CHD7-206ENST00000527900 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
CHD7-206ENST00000527900 HSP90AB3PQ58FF7 597 aa11.11□□□□□ -0.63
CHD7-206ENST00000527900 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
CHD7-206ENST00000527900 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
CHD7-206ENST00000527900 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
CHD7-206ENST00000527900 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
CHD7-206ENST00000527900 MBIPQ9NS73 344 aa11.11□□□□□ -0.63
CHD7-206ENST00000527900 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
CHD7-206ENST00000527900 APAF1O14727 1248 aa11.1□□□□□ -0.63
CHD7-206ENST00000527900 AIMP1Q12904 312 aaKnown RBP11.1□□□□□ -0.63
CHD7-206ENST00000527900 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
CHD7-206ENST00000527900 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
CHD7-206ENST00000527900 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
CHD7-206ENST00000527900 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
CHD7-206ENST00000527900 LAS1LQ9Y4W2 734 aaKnown RBP11.1□□□□□ -0.63
CHD7-206ENST00000527900 TAF1P21675 1872 aa11.1□□□□□ -0.63
CHD7-206ENST00000527900 IQCA1LA6NCM1 817 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
CHD7-206ENST00000527900 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
CHD7-206ENST00000527900 CCDC184Q52MB2 194 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 HDGFL1Q5TGJ6 251 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 DUSP27Q5VZP5 1158 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 ANKRD13DQ6ZTN6 518 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 RTFDC1Q9BY42 306 aaPredicted RBP11.09□□□□□ -0.63
CHD7-206ENST00000527900 DBF4Q9UBU7 674 aaPredicted RBP11.09□□□□□ -0.63
CHD7-206ENST00000527900 ATP6V0A2Q9Y487 856 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 DDX60Q8IY21 1712 aaKnown RBP11.09□□□□□ -0.63
CHD7-206ENST00000527900 ABCC4O15439 1325 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
CHD7-206ENST00000527900 BBOX1O75936 387 aa11.08□□□□□ -0.64
CHD7-206ENST00000527900 HCLS1P14317 486 aaPredicted RBP11.08□□□□□ -0.64
CHD7-206ENST00000527900 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
CHD7-206ENST00000527900 LDHDQ86WU2 507 aa11.08□□□□□ -0.64
CHD7-206ENST00000527900 GPC2Q8N158 579 aa11.08□□□□□ -0.64
CHD7-206ENST00000527900 VPS33BQ9H267 617 aa11.08□□□□□ -0.64
CHD7-206ENST00000527900 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
CHD7-206ENST00000527900 LTBP1Q14766 1721 aa11.08□□□□□ -0.64
CHD7-206ENST00000527900 SH3TC1Q8TE82 1336 aa11.08□□□□□ -0.64
CHD7-206ENST00000527900 SP8Q8IXZ3 490 aa11.07□□□□□ -0.64
CHD7-206ENST00000527900 HYPKQ9NX55 129 aa11.07□□□□□ -0.64
CHD7-206ENST00000527900 TRMT112Q9UI30 125 aaKnown RBP11.07□□□□□ -0.64
CHD7-206ENST00000527900 HACL1Q9UJ83 578 aa11.07□□□□□ -0.64
CHD7-206ENST00000527900 TCERG1O14776 1098 aaKnown RBP11.06□□□□□ -0.64
CHD7-206ENST00000527900 EPHX2P34913 555 aa11.06□□□□□ -0.64
CHD7-206ENST00000527900 GNAI1P63096 354 aa11.06□□□□□ -0.64
CHD7-206ENST00000527900 SF3B3Q15393 1217 aaKnown RBP11.06□□□□□ -0.64
CHD7-206ENST00000527900 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
CHD7-206ENST00000527900 JDP2Q8WYK2 163 aa11.06□□□□□ -0.64
CHD7-206ENST00000527900 CREBZFQ9NS37 354 aa11.06□□□□□ -0.64
CHD7-206ENST00000527900 LRRC37AA6NMS7 1700 aa11.06□□□□□ -0.64
CHD7-206ENST00000527900 COL4A1P02462 1669 aa11.05□□□□□ -0.64
CHD7-206ENST00000527900 SCNN1DP51172 638 aa11.05□□□□□ -0.64
CHD7-206ENST00000527900 GRAPQ13588 217 aa11.05□□□□□ -0.64
CHD7-206ENST00000527900 PNMA8AQ86V59 439 aaPredicted RBP11.05□□□□□ -0.64
CHD7-206ENST00000527900 LARGE2Q8N3Y3 721 aa11.05□□□□□ -0.64
CHD7-206ENST00000527900 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
CHD7-206ENST00000527900 FAM89AQ96GI7 184 aa11.05□□□□□ -0.64
CHD7-206ENST00000527900 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms