RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 FAM177BA6PVY3 158 aa21.19■□□□□ 0.98
SMCO4-204ENST00000527149 NEURL1BA8MQ27 555 aa21.19■□□□□ 0.98
SMCO4-204ENST00000527149 CWF19L2Q2TBE0 894 aaKnown RBP21.19■□□□□ 0.98
SMCO4-204ENST00000527149 BEND3Q5T5X7 828 aa21.19■□□□□ 0.98
SMCO4-204ENST00000527149 CCDC24Q8N4L8 307 aa21.19■□□□□ 0.98
SMCO4-204ENST00000527149 CCDC191Q8NCU4 936 aa21.19■□□□□ 0.98
SMCO4-204ENST00000527149 NLGN2Q8NFZ4 835 aa21.19■□□□□ 0.98
SMCO4-204ENST00000527149 SYT17Q9BSW7 474 aa21.19■□□□□ 0.98
SMCO4-204ENST00000527149 TPTE2Q6XPS3 522 aa21.18■□□□□ 0.98
SMCO4-204ENST00000527149 NUTM1Q86Y26 1132 aa21.18■□□□□ 0.98
SMCO4-204ENST00000527149 LINS1Q8NG48 757 aa21.18■□□□□ 0.98
SMCO4-204ENST00000527149 ARHGAP45Q92619 1136 aa21.18■□□□□ 0.98
SMCO4-204ENST00000527149 UTP14AQ9BVJ6 771 aaKnown RBP21.18■□□□□ 0.98
SMCO4-204ENST00000527149 NYXQ9GZU5 481 aa21.18■□□□□ 0.98
SMCO4-204ENST00000527149 NEXNQ0ZGT2 675 aa21.17■□□□□ 0.98
SMCO4-204ENST00000527149 ERFEQ4G0M1 354 aa21.17■□□□□ 0.98
SMCO4-204ENST00000527149 PPP1R42Q7Z4L9 355 aa21.17■□□□□ 0.98
SMCO4-204ENST00000527149 SYNE4Q8N205 404 aa21.17■□□□□ 0.98
SMCO4-204ENST00000527149 RCAN3Q9UKA8 241 aa21.17■□□□□ 0.98
SMCO4-204ENST00000527149 UTRNP46939 3433 aa21.17■□□□□ 0.98
SMCO4-204ENST00000527149 ABCC4O15439 1325 aa21.16■□□□□ 0.98
SMCO4-204ENST00000527149 BRIP1Q9BX63 1249 aa21.16■□□□□ 0.98
SMCO4-204ENST00000527149 CWC25Q9NXE8 425 aaPredicted RBP21.16■□□□□ 0.98
SMCO4-204ENST00000527149 TNNQ9UQP3 1299 aa21.16■□□□□ 0.98
SMCO4-204ENST00000527149 SH3TC1Q8TE82 1336 aa21.15■□□□□ 0.98
SMCO4-204ENST00000527149 KLRG2A4D1S0 409 aaPredicted RBP21.15■□□□□ 0.98
SMCO4-204ENST00000527149 TRIM27P14373 513 aa21.15■□□□□ 0.98
SMCO4-204ENST00000527149 ST5P78524 1137 aa21.15■□□□□ 0.98
SMCO4-204ENST00000527149 KLHL34Q8N239 644 aa21.15■□□□□ 0.98
SMCO4-204ENST00000527149 API5Q9BZZ5 524 aaKnown RBP21.15■□□□□ 0.98
SMCO4-204ENST00000527149 TRMT112Q9UI30 125 aaKnown RBP21.15■□□□□ 0.98
SMCO4-204ENST00000527149 GCKRQ14397 625 aa21.14■□□□□ 0.97
SMCO4-204ENST00000527149 SLC10A5Q5PT55 438 aa21.14■□□□□ 0.97
SMCO4-204ENST00000527149 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.97
SMCO4-204ENST00000527149 PCCAP05165 728 aaPredicted RBP21.13■□□□□ 0.97
SMCO4-204ENST00000527149 CASP7P55210 303 aa21.13■□□□□ 0.97
SMCO4-204ENST00000527149 TGFB2P61812 414 aa21.13■□□□□ 0.97
SMCO4-204ENST00000527149 SLC4A10Q6U841 1118 aa21.13■□□□□ 0.97
SMCO4-204ENST00000527149 C3orf67Q6ZVT6 689 aa21.13■□□□□ 0.97
SMCO4-204ENST00000527149 ZBTB38Q8NAP3 1195 aaPredicted RBP21.13■□□□□ 0.97
SMCO4-204ENST00000527149 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
SMCO4-204ENST00000527149 ALDH1L1O75891 902 aa21.12■□□□□ 0.97
SMCO4-204ENST00000527149 KCNA3P22001 575 aa21.12■□□□□ 0.97
SMCO4-204ENST00000527149 FRAT1Q92837 279 aaPredicted RBP21.12■□□□□ 0.97
SMCO4-204ENST00000527149 MYH3P11055 1940 aa21.12■□□□□ 0.97
SMCO4-204ENST00000527149 CDHR2Q9BYE9 1310 aa21.11■□□□□ 0.97
SMCO4-204ENST00000527149 H7C1W4 665 aa21.11■□□□□ 0.97
SMCO4-204ENST00000527149 NPHP1O15259 732 aa21.11■□□□□ 0.97
SMCO4-204ENST00000527149 DPEP1P16444 411 aa21.11■□□□□ 0.97
SMCO4-204ENST00000527149 CHRNA5P30532 468 aa21.11■□□□□ 0.97
SMCO4-204ENST00000527149 CRY2Q49AN0 593 aa21.11■□□□□ 0.97
SMCO4-204ENST00000527149 SRCIN1Q9C0H9 1055 aa21.11■□□□□ 0.97
SMCO4-204ENST00000527149 IPO8O15397 1037 aaKnown RBP21.1■□□□□ 0.97
SMCO4-204ENST00000527149 HCLS1P14317 486 aaPredicted RBP21.1■□□□□ 0.97
SMCO4-204ENST00000527149 ZKSCAN2Q63HK3 967 aa21.1■□□□□ 0.97
SMCO4-204ENST00000527149 JARID2Q92833 1246 aaPredicted RBP21.1■□□□□ 0.97
SMCO4-204ENST00000527149 A0A0G2JLW4 131 aa21.09■□□□□ 0.97
SMCO4-204ENST00000527149 GTF2E1P29083 439 aaPredicted RBP21.09■□□□□ 0.97
SMCO4-204ENST00000527149 PDE6BP35913 854 aa21.09■□□□□ 0.97
SMCO4-204ENST00000527149 RTL5Q5HYW3 569 aaPredicted RBP21.09■□□□□ 0.97
SMCO4-204ENST00000527149 COL4A1P02462 1669 aa21.09■□□□□ 0.97
SMCO4-204ENST00000527149 UTYO14607 1347 aa21.08■□□□□ 0.97
SMCO4-204ENST00000527149 IRS4O14654 1257 aaPredicted RBP21.08■□□□□ 0.97
SMCO4-204ENST00000527149 SRGNP10124 158 aa21.08■□□□□ 0.97
SMCO4-204ENST00000527149 RLBP1P12271 317 aa21.08■□□□□ 0.97
SMCO4-204ENST00000527149 INTS3Q68E01 1043 aaKnown RBP21.08■□□□□ 0.97
SMCO4-204ENST00000527149 UBE3BQ7Z3V4 1068 aa21.08■□□□□ 0.97
SMCO4-204ENST00000527149 C2CD5Q86YS7 1000 aa21.08■□□□□ 0.97
SMCO4-204ENST00000527149 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
SMCO4-204ENST00000527149 CACNA1SQ13698 1873 aa21.07■□□□□ 0.96
SMCO4-204ENST00000527149 ARFGEF1Q9Y6D6 1849 aa21.07■□□□□ 0.96
SMCO4-204ENST00000527149 GRM8O00222 908 aa21.07■□□□□ 0.96
SMCO4-204ENST00000527149 CCT4P50991 539 aaKnown RBP21.07■□□□□ 0.96
SMCO4-204ENST00000527149 CLUAP1Q96AJ1 413 aa21.06■□□□□ 0.96
SMCO4-204ENST00000527149 PLA2G12BQ9BX93 195 aa21.06■□□□□ 0.96
SMCO4-204ENST00000527149 H0YIN7 160 aa21.05■□□□□ 0.96
SMCO4-204ENST00000527149 USP44Q9H0E7 712 aa21.05■□□□□ 0.96
SMCO4-204ENST00000527149 SLX4Q8IY92 1834 aa21.05■□□□□ 0.96
SMCO4-204ENST00000527149 TAF1P21675 1872 aa21.05■□□□□ 0.96
SMCO4-204ENST00000527149 NBPF7P0C2Y1 421 aaPredicted RBP21.04■□□□□ 0.96
SMCO4-204ENST00000527149 HOXA10P31260 410 aaPredicted RBP21.04■□□□□ 0.96
SMCO4-204ENST00000527149 STYK1Q6J9G0 422 aa21.04■□□□□ 0.96
SMCO4-204ENST00000527149 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
SMCO4-204ENST00000527149 PLIN1O60240 522 aa21.03■□□□□ 0.96
SMCO4-204ENST00000527149 NPR1P16066 1061 aa21.03■□□□□ 0.96
SMCO4-204ENST00000527149 SF3B3Q15393 1217 aaKnown RBP21.03■□□□□ 0.96
SMCO4-204ENST00000527149 DZIP1LQ8IYY4 767 aaKnown RBP21.03■□□□□ 0.96
SMCO4-204ENST00000527149 MASTLQ96GX5 879 aa21.03■□□□□ 0.96
SMCO4-204ENST00000527149 KAZALD1Q96I82 304 aa21.03■□□□□ 0.96
SMCO4-204ENST00000527149 NLRP3Q96P20 1036 aa21.03■□□□□ 0.96
SMCO4-204ENST00000527149 PDE8AO60658 829 aa21.02■□□□□ 0.96
SMCO4-204ENST00000527149 CTSWP56202 376 aa21.02■□□□□ 0.96
SMCO4-204ENST00000527149 YBX3P16989 372 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMCO4-204ENST00000527149 EPHA10Q5JZY3 1008 aa21.01■□□□□ 0.95
SMCO4-204ENST00000527149 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
SMCO4-204ENST00000527149 SUCLG2Q96I99 432 aa21.01■□□□□ 0.95
SMCO4-204ENST00000527149 C9orf78Q9NZ63 289 aaPredicted RBP21.01■□□□□ 0.95
SMCO4-204ENST00000527149 PIM2Q9P1W9 311 aa21.01■□□□□ 0.95
SMCO4-204ENST00000527149 WWC3Q9ULE0 1092 aa21.01■□□□□ 0.95
SMCO4-204ENST00000527149 RTL9Q8NET4 1388 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms