RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 RNF123Q5XPI4 1314 aa27.73■■■□□ 2.03
PACSIN3-203ENST00000525725 WDR43Q15061 677 aaKnown RBP eCLIP27.73■■■□□ 2.03
PACSIN3-203ENST00000525725 KLRG1Q96E93 195 aa27.73■■■□□ 2.03
PACSIN3-203ENST00000525725 PSMD1Q99460 953 aa27.73■■■□□ 2.03
PACSIN3-203ENST00000525725 ZNF541Q9H0D2 1346 aa27.72■■■□□ 2.03
PACSIN3-203ENST00000525725 ANXA1P04083 346 aa27.72■■■□□ 2.03
PACSIN3-203ENST00000525725 JMYQ8N9B5 988 aa27.72■■■□□ 2.03
PACSIN3-203ENST00000525725 ZNF277Q9NRM2 450 aaPredicted RBP27.72■■■□□ 2.03
PACSIN3-203ENST00000525725 ADAMTS8Q9UP79 889 aa27.72■■■□□ 2.03
PACSIN3-203ENST00000525725 DDNO94850 711 aaPredicted RBP27.71■■■□□ 2.03
PACSIN3-203ENST00000525725 EIF2S2P20042 333 aaKnown RBP27.71■■■□□ 2.03
PACSIN3-203ENST00000525725 LTBP1Q14766 1721 aa27.71■■■□□ 2.03
PACSIN3-203ENST00000525725 KRT24Q2M2I5 525 aa27.71■■■□□ 2.03
PACSIN3-203ENST00000525725 C3orf67Q6ZVT6 689 aa27.71■■■□□ 2.03
PACSIN3-203ENST00000525725 HOXB7P09629 217 aa27.7■■■□□ 2.02
PACSIN3-203ENST00000525725 TAF1P21675 1872 aa27.7■■■□□ 2.02
PACSIN3-203ENST00000525725 CC2D2BQ6DHV5 1058 aa27.69■■■□□ 2.02
PACSIN3-203ENST00000525725 CRAMP1Q96RY5 1269 aa27.69■■■□□ 2.02
PACSIN3-203ENST00000525725 DDX21Q9NR30 783 aaKnown RBP eCLIP27.69■■■□□ 2.02
PACSIN3-203ENST00000525725 IARSP41252 1262 aaKnown RBP27.68■■■□□ 2.02
PACSIN3-203ENST00000525725 PPP1R42Q7Z4L9 355 aa27.68■■■□□ 2.02
PACSIN3-203ENST00000525725 RPGRQ92834 1020 aaKnown RBP27.68■■■□□ 2.02
PACSIN3-203ENST00000525725 FZD9O00144 591 aa27.67■■■□□ 2.02
PACSIN3-203ENST00000525725 NEUROD2Q15784 382 aa27.67■■■□□ 2.02
PACSIN3-203ENST00000525725 SLC10A5Q5PT55 438 aa27.67■■■□□ 2.02
PACSIN3-203ENST00000525725 SLC51AQ86UW1 340 aa27.67■■■□□ 2.02
PACSIN3-203ENST00000525725 POTEIP0CG38 1075 aa27.66■■■□□ 2.02
PACSIN3-203ENST00000525725 POTEJP0CG39 1038 aa27.66■■■□□ 2.02
PACSIN3-203ENST00000525725 XAGE3Q8WTP9 111 aa27.66■■■□□ 2.02
PACSIN3-203ENST00000525725 DUOX1Q9NRD9 1551 aa27.65■■■□□ 2.02
PACSIN3-203ENST00000525725 IQCA1LA6NCM1 817 aa27.65■■■□□ 2.02
PACSIN3-203ENST00000525725 GRIPAP1Q4V328 841 aa27.65■■■□□ 2.02
PACSIN3-203ENST00000525725 COPS6Q7L5N1 327 aa27.65■■■□□ 2.02
PACSIN3-203ENST00000525725 HSP90AB3PQ58FF7 597 aa27.64■■■□□ 2.02
PACSIN3-203ENST00000525725 NLRP10Q86W26 655 aa27.64■■■□□ 2.02
PACSIN3-203ENST00000525725 SYNE4Q8N205 404 aa27.64■■■□□ 2.02
PACSIN3-203ENST00000525725 CFAP44Q96MT7 982 aa27.64■■■□□ 2.02
PACSIN3-203ENST00000525725 UTP14AQ9BVJ6 771 aaKnown RBP27.64■■■□□ 2.02
PACSIN3-203ENST00000525725 CHPF2Q9P2E5 772 aa27.64■■■□□ 2.02
PACSIN3-203ENST00000525725 PPEF1O14829 653 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-203ENST00000525725 ZNF853P0CG23 659 aa27.63■■■□□ 2.01
PACSIN3-203ENST00000525725 CHADLQ6NUI6 762 aa27.63■■■□□ 2.01
PACSIN3-203ENST00000525725 TAF1DQ9H5J8 278 aaPredicted RBP27.63■■■□□ 2.01
PACSIN3-203ENST00000525725 NECTIN2Q92692 538 aa27.62■■■□□ 2.01
PACSIN3-203ENST00000525725 RBM17Q96I25 401 aaKnown RBP27.62■■■□□ 2.01
PACSIN3-203ENST00000525725 IFFO2Q5TF58 517 aa27.61■■■□□ 2.01
PACSIN3-203ENST00000525725 HDGFL1Q5TGJ6 251 aa27.61■■■□□ 2.01
PACSIN3-203ENST00000525725 COL4A1P02462 1669 aa27.61■■■□□ 2.01
PACSIN3-203ENST00000525725 ABCC4O15439 1325 aa27.61■■■□□ 2.01
PACSIN3-203ENST00000525725 TCIRG1Q13488 830 aa27.6■■■□□ 2.01
PACSIN3-203ENST00000525725 LDHDQ86WU2 507 aa27.6■■■□□ 2.01
PACSIN3-203ENST00000525725 NLRP3Q96P20 1036 aa27.6■■■□□ 2.01
PACSIN3-203ENST00000525725 MBIPQ9NS73 344 aa27.6■■■□□ 2.01
PACSIN3-203ENST00000525725 GPC2Q8N158 579 aa27.59■■■□□ 2.01
PACSIN3-203ENST00000525725 PASKQ96RG2 1323 aa27.59■■■□□ 2.01
PACSIN3-203ENST00000525725 AIMP1Q12904 312 aaKnown RBP27.58■■■□□ 2.01
PACSIN3-203ENST00000525725 ATP6V0A2Q9Y487 856 aa27.58■■■□□ 2.01
PACSIN3-203ENST00000525725 LAS1LQ9Y4W2 734 aaKnown RBP27.58■■■□□ 2.01
PACSIN3-203ENST00000525725 PLBD2Q8NHP8 589 aa27.57■■■□□ 2
PACSIN3-203ENST00000525725 DBF4Q9UBU7 674 aaPredicted RBP27.57■■■□□ 2
PACSIN3-203ENST00000525725 SH3TC1Q8TE82 1336 aa27.57■■■□□ 2
PACSIN3-203ENST00000525725 DUSP27Q5VZP5 1158 aa27.56■■■□□ 2
PACSIN3-203ENST00000525725 IFT57Q9NWB7 429 aa27.56■■■□□ 2
PACSIN3-203ENST00000525725 HACL1Q9UJ83 578 aa27.56■■■□□ 2
PACSIN3-203ENST00000525725 APAF1O14727 1248 aa27.55■■■□□ 2
PACSIN3-203ENST00000525725 ISCA1Q9BUE6 129 aa27.55■■■□□ 2
PACSIN3-203ENST00000525725 CREBZFQ9NS37 354 aa27.55■■■□□ 2
PACSIN3-203ENST00000525725 JDP2Q8WYK2 163 aa27.54■■■□□ 2
PACSIN3-203ENST00000525725 RTFDC1Q9BY42 306 aaPredicted RBP27.54■■■□□ 2
PACSIN3-203ENST00000525725 TRPM7Q96QT4 1865 aa27.53■■■□□ 2
PACSIN3-203ENST00000525725 HCLS1P14317 486 aaPredicted RBP27.53■■■□□ 2
PACSIN3-203ENST00000525725 EPHX2P34913 555 aa27.53■■■□□ 2
PACSIN3-203ENST00000525725 TRMT112Q9UI30 125 aaKnown RBP27.53■■■□□ 2
PACSIN3-203ENST00000525725 VPS33BQ9H267 617 aa27.52■■■□□ 2
PACSIN3-203ENST00000525725 HYPKQ9NX55 129 aa27.52■■■□□ 2
PACSIN3-203ENST00000525725 LARGE2Q8N3Y3 721 aa27.51■■□□□ 1.99
PACSIN3-203ENST00000525725 THSD7BQ9C0I4 1608 aa27.51■■□□□ 1.99
PACSIN3-203ENST00000525725 MYH3P11055 1940 aa27.51■■□□□ 1.99
PACSIN3-203ENST00000525725 ITGBL1O95965 494 aaPredicted RBP27.5■■□□□ 1.99
PACSIN3-203ENST00000525725 SCNN1DP51172 638 aa27.5■■□□□ 1.99
PACSIN3-203ENST00000525725 CALD1Q05682 793 aaKnown RBP27.5■■□□□ 1.99
PACSIN3-203ENST00000525725 ANKRD13DQ6ZTN6 518 aa27.5■■□□□ 1.99
PACSIN3-203ENST00000525725 BBOX1O75936 387 aa27.49■■□□□ 1.99
PACSIN3-203ENST00000525725 GNAI1P63096 354 aa27.49■■□□□ 1.99
PACSIN3-203ENST00000525725 TRIM28Q13263 835 aaKnown RBP27.49■■□□□ 1.99
PACSIN3-203ENST00000525725 GRAPQ13588 217 aa27.49■■□□□ 1.99
PACSIN3-203ENST00000525725 PNMA8AQ86V59 439 aaPredicted RBP27.49■■□□□ 1.99
PACSIN3-203ENST00000525725 GRAPLQ8TC17 118 aaPredicted RBP27.49■■□□□ 1.99
PACSIN3-203ENST00000525725 CNTNAP1P78357 1384 aa27.48■■□□□ 1.99
PACSIN3-203ENST00000525725 CACNA1FO60840 1977 aa27.48■■□□□ 1.99
PACSIN3-203ENST00000525725 EIF6P56537 245 aaKnown RBP27.48■■□□□ 1.99
PACSIN3-203ENST00000525725 SP8Q8IXZ3 490 aa27.48■■□□□ 1.99
PACSIN3-203ENST00000525725 TCERG1O14776 1098 aaKnown RBP27.47■■□□□ 1.99
PACSIN3-203ENST00000525725 PPIP5K2O43314 1243 aa27.47■■□□□ 1.99
PACSIN3-203ENST00000525725 ZEB1P37275 1124 aaPredicted RBP27.47■■□□□ 1.99
PACSIN3-203ENST00000525725 AOC3Q16853 763 aa27.47■■□□□ 1.99
PACSIN3-203ENST00000525725 EAPPQ56P03 285 aaPredicted RBP27.46■■□□□ 1.99
PACSIN3-203ENST00000525725 NIM1KQ8IY84 436 aa27.46■■□□□ 1.99
PACSIN3-203ENST00000525725 PSME4Q14997 1843 aa27.46■■□□□ 1.99
PACSIN3-203ENST00000525725 SF3B3Q15393 1217 aaKnown RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms