RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 VEGFBP49765 207 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 PNMA8AQ86V59 439 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 GPC2Q8N158 579 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 JDP2Q8WYK2 163 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 PSMD1Q99460 953 aa12.67□□□□□ -0.38
TRAPPC4-206ENST00000525303 UBN2Q6ZU65 1347 aa12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 CNTROBQ8N137 903 aa12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-206ENST00000525303 ZNF316A6NFI3 1004 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-206ENST00000525303 CC2D2BQ6DHV5 1058 aa12.65□□□□□ -0.38
TRAPPC4-206ENST00000525303 AIDAQ96BJ3 306 aa12.65□□□□□ -0.38
TRAPPC4-206ENST00000525303 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
TRAPPC4-206ENST00000525303 GJA3Q9Y6H8 435 aa12.65□□□□□ -0.38
TRAPPC4-206ENST00000525303 POLR2AP24928 1970 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-206ENST00000525303 THSD7BQ9C0I4 1608 aa12.64□□□□□ -0.39
TRAPPC4-206ENST00000525303 TCERG1O14776 1098 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-206ENST00000525303 HOXA10P31260 410 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-206ENST00000525303 EIF6P56537 245 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-206ENST00000525303 NFE2L2Q16236 605 aa12.64□□□□□ -0.39
TRAPPC4-206ENST00000525303 SUSD4Q5VX71 490 aa12.64□□□□□ -0.39
TRAPPC4-206ENST00000525303 SLC51AQ86UW1 340 aa12.64□□□□□ -0.39
TRAPPC4-206ENST00000525303 RASSF10A6NK89 507 aa12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 LMOD1P29536 600 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 CTCFP49711 727 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 DEFB115Q30KQ5 88 aa12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 LARGE2Q8N3Y3 721 aa12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 RBM17Q96I25 401 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
TRAPPC4-206ENST00000525303 NTSR2O95665 410 aa12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 SCNN1DP51172 638 aa12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 GIGYF2Q6Y7W6 1299 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 CRAMP1Q96RY5 1269 aa12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 ABT1Q9ULW3 272 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 DDX60Q8IY21 1712 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
TRAPPC4-206ENST00000525303 EPS15P42566 896 aa12.61□□□□□ -0.39
TRAPPC4-206ENST00000525303 LBX1P52954 281 aa12.61□□□□□ -0.39
TRAPPC4-206ENST00000525303 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
TRAPPC4-206ENST00000525303 DDX21Q9NR30 783 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAPPC4-206ENST00000525303 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
TRAPPC4-206ENST00000525303 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-206ENST00000525303 CASP8AP2Q9UKL3 1982 aa12.6□□□□□ -0.39
TRAPPC4-206ENST00000525303 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC4-206ENST00000525303 NIM1KQ8IY84 436 aa12.6□□□□□ -0.39
TRAPPC4-206ENST00000525303 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
TRAPPC4-206ENST00000525303 PNNQ9H307 717 aaKnown RBP12.6□□□□□ -0.39
TRAPPC4-206ENST00000525303 TSPYL4Q9UJ04 414 aa12.6□□□□□ -0.39
TRAPPC4-206ENST00000525303 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 PPIP5K2O43314 1243 aa12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 PDIA6Q15084 440 aa12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 AOC3Q16853 763 aa12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 PARP10Q53GL7 1025 aa12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 LRP10Q7Z4F1 713 aa12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 ABCC4O15439 1325 aa12.59□□□□□ -0.39
TRAPPC4-206ENST00000525303 ANXA1P04083 346 aa12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 HSPA8P11142 646 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 MAP2K1Q02750 393 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 PROSER3Q2NL68 480 aa12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 USP50Q70EL3 339 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 UTP14AQ9BVJ6 771 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
TRAPPC4-206ENST00000525303 TRAF5O00463 557 aa12.57□□□□□ -0.4
TRAPPC4-206ENST00000525303 GRM1Q13255 1194 aa12.57□□□□□ -0.4
TRAPPC4-206ENST00000525303 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
TRAPPC4-206ENST00000525303 RIPK4P57078 832 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 CYP4F22Q6NT55 531 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 CAPNS2Q96L46 248 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 ADARB2Q9NS39 739 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 GPRC5DQ9NZD1 345 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 ZNRF3Q9ULT6 936 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 DUOX1Q9NRD9 1551 aa12.56□□□□□ -0.4
TRAPPC4-206ENST00000525303 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 ECE1P42892 770 aa12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 CXCL9Q07325 125 aa12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 AIMP1Q12904 312 aaKnown RBP12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 CST9Q5W186 159 aa12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 DPP8Q6V1X1 898 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 NLRP10Q86W26 655 aa12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 SUPT20HQ8NEM7 779 aa12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-206ENST00000525303 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms