RNA–Protein interactions for RNA: ENST00000524995.5

SLC43A1-202, Transcript of solute carrier family 43 member 1, humanhuman

TSL 3

Gene SLC43A1, Length 953 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-202ENST00000524995 TCIRG1Q13488 830 aa25.73■■□□□ 1.71
SLC43A1-202ENST00000524995 PPP1R42Q7Z4L9 355 aa25.73■■□□□ 1.71
SLC43A1-202ENST00000524995 NLRP10Q86W26 655 aa25.73■■□□□ 1.71
SLC43A1-202ENST00000524995 ARFGEF2Q9Y6D5 1785 aa25.72■■□□□ 1.71
SLC43A1-202ENST00000524995 CRY2Q49AN0 593 aa25.72■■□□□ 1.71
SLC43A1-202ENST00000524995 WWC1Q8IX03 1113 aa25.72■■□□□ 1.71
SLC43A1-202ENST00000524995 ZNF277Q9NRM2 450 aaPredicted RBP25.72■■□□□ 1.71
SLC43A1-202ENST00000524995 DBF4Q9UBU7 674 aaPredicted RBP25.72■■□□□ 1.71
SLC43A1-202ENST00000524995 PARP10Q53GL7 1025 aa25.71■■□□□ 1.71
SLC43A1-202ENST00000524995 ANKRD13DQ6ZTN6 518 aa25.71■■□□□ 1.71
SLC43A1-202ENST00000524995 FAM9BQ8IZU0 186 aa25.71■■□□□ 1.71
SLC43A1-202ENST00000524995 RPGRQ92834 1020 aaKnown RBP25.71■■□□□ 1.71
SLC43A1-202ENST00000524995 TIAM2Q8IVF5 1701 aa25.71■■□□□ 1.71
SLC43A1-202ENST00000524995 KDM2BQ8NHM5 1336 aa25.7■■□□□ 1.71
SLC43A1-202ENST00000524995 HOXB7P09629 217 aa25.7■■□□□ 1.7
SLC43A1-202ENST00000524995 CCDC93Q567U6 631 aa25.7■■□□□ 1.7
SLC43A1-202ENST00000524995 RTL5Q5HYW3 569 aaPredicted RBP25.7■■□□□ 1.7
SLC43A1-202ENST00000524995 GLTPD2A6NH11 291 aa25.69■■□□□ 1.7
SLC43A1-202ENST00000524995 ALDH1B1P30837 517 aa25.69■■□□□ 1.7
SLC43A1-202ENST00000524995 CALD1Q05682 793 aaKnown RBP25.69■■□□□ 1.7
SLC43A1-202ENST00000524995 PLBD2Q8NHP8 589 aa25.69■■□□□ 1.7
SLC43A1-202ENST00000524995 TRMT112Q9UI30 125 aaKnown RBP25.69■■□□□ 1.7
SLC43A1-202ENST00000524995 ANKRD36CQ5JPF3 1778 aa25.68■■□□□ 1.7
SLC43A1-202ENST00000524995 POTECB2RU33 542 aa25.67■■□□□ 1.7
SLC43A1-202ENST00000524995 TOMM70O94826 608 aa25.67■■□□□ 1.7
SLC43A1-202ENST00000524995 HSP90AB3PQ58FF7 597 aa25.67■■□□□ 1.7
SLC43A1-202ENST00000524995 SLC10A5Q5PT55 438 aa25.67■■□□□ 1.7
SLC43A1-202ENST00000524995 NLRP3Q96P20 1036 aa25.67■■□□□ 1.7
SLC43A1-202ENST00000524995 HYPKQ9NX55 129 aa25.67■■□□□ 1.7
SLC43A1-202ENST00000524995 IBTKQ9P2D0 1353 aaPredicted RBP25.67■■□□□ 1.7
SLC43A1-202ENST00000524995 LTBP3Q9NS15 1303 aa25.66■■□□□ 1.7
SLC43A1-202ENST00000524995 DDNO94850 711 aaPredicted RBP25.66■■□□□ 1.7
SLC43A1-202ENST00000524995 HOXA10P31260 410 aaPredicted RBP25.66■■□□□ 1.7
SLC43A1-202ENST00000524995 JARID2Q92833 1246 aaPredicted RBP25.66■■□□□ 1.7
SLC43A1-202ENST00000524995 RBM17Q96I25 401 aaKnown RBP25.66■■□□□ 1.7
SLC43A1-202ENST00000524995 FKBP4Q02790 459 aaKnown RBP eCLIP25.65■■□□□ 1.7
SLC43A1-202ENST00000524995 SOGA3Q5TF21 947 aa25.65■■□□□ 1.7
SLC43A1-202ENST00000524995 C16orf71Q8IYS4 520 aaPredicted RBP25.65■■□□□ 1.7
SLC43A1-202ENST00000524995 FAM89AQ96GI7 184 aa25.65■■□□□ 1.7
SLC43A1-202ENST00000524995 ISCA1Q9BUE6 129 aa25.65■■□□□ 1.7
SLC43A1-202ENST00000524995 DICER1Q9UPY3 1922 aaKnown RBP25.65■■□□□ 1.7
SLC43A1-202ENST00000524995 HSPA6P17066 643 aa25.64■■□□□ 1.7
SLC43A1-202ENST00000524995 RIC3Q7Z5B4 369 aa25.64■■□□□ 1.7
SLC43A1-202ENST00000524995 TAF1P21675 1872 aa25.64■■□□□ 1.69
SLC43A1-202ENST00000524995 CCDC27Q2M243 656 aa25.63■■□□□ 1.69
SLC43A1-202ENST00000524995 LAMB2P55268 1798 aa25.62■■□□□ 1.69
SLC43A1-202ENST00000524995 PPEF1O14829 653 aaPredicted RBP25.62■■□□□ 1.69
SLC43A1-202ENST00000524995 CRAMP1Q96RY5 1269 aa25.62■■□□□ 1.69
SLC43A1-202ENST00000524995 MYD88Q99836 296 aa25.62■■□□□ 1.69
SLC43A1-202ENST00000524995 SPINK5Q9NQ38 1064 aaPredicted RBP25.62■■□□□ 1.69
SLC43A1-202ENST00000524995 ABCC4O15439 1325 aa25.62■■□□□ 1.69
SLC43A1-202ENST00000524995 SH3TC1Q8TE82 1336 aa25.62■■□□□ 1.69
SLC43A1-202ENST00000524995 HTRA3P83110 453 aa25.61■■□□□ 1.69
SLC43A1-202ENST00000524995 G2E3Q7L622 706 aa25.61■■□□□ 1.69
SLC43A1-202ENST00000524995 RTKN2Q8IZC4 609 aa25.61■■□□□ 1.69
SLC43A1-202ENST00000524995 RIC1Q4ADV7 1423 aa25.61■■□□□ 1.69
SLC43A1-202ENST00000524995 ZNF541Q9H0D2 1346 aa25.61■■□□□ 1.69
SLC43A1-202ENST00000524995 ZC3H4Q9UPT8 1303 aaKnown RBP25.61■■□□□ 1.69
SLC43A1-202ENST00000524995 DPY19L2Q6NUT2 758 aa25.6■■□□□ 1.69
SLC43A1-202ENST00000524995 VEGFAP15692 232 aaPredicted RBP25.59■■□□□ 1.69
SLC43A1-202ENST00000524995 IARSP41252 1262 aaKnown RBP25.59■■□□□ 1.69
SLC43A1-202ENST00000524995 GOLGA2Q08379 1002 aa25.59■■□□□ 1.69
SLC43A1-202ENST00000524995 CCDC30Q5VVM6 783 aa25.59■■□□□ 1.69
SLC43A1-202ENST00000524995 RBM46Q8TBY0 533 aaKnown RBP25.59■■□□□ 1.69
SLC43A1-202ENST00000524995 SNED1Q8TER0 1413 aa25.59■■□□□ 1.69
SLC43A1-202ENST00000524995 TWISTNBQ3B726 338 aaPredicted RBP25.58■■□□□ 1.69
SLC43A1-202ENST00000524995 COL4A5P29400 1685 aa25.58■■□□□ 1.68
SLC43A1-202ENST00000524995 FANCIQ9NVI1 1328 aa25.57■■□□□ 1.68
SLC43A1-202ENST00000524995 COL4A1P02462 1669 aa25.56■■□□□ 1.68
SLC43A1-202ENST00000524995 CCER2I3L3R5 266 aa25.56■■□□□ 1.68
SLC43A1-202ENST00000524995 POTEIP0CG38 1075 aa25.56■■□□□ 1.68
SLC43A1-202ENST00000524995 POTEJP0CG39 1038 aa25.56■■□□□ 1.68
SLC43A1-202ENST00000524995 DDX60Q8IY21 1712 aaKnown RBP25.56■■□□□ 1.68
SLC43A1-202ENST00000524995 MAP3K2Q9Y2U5 619 aa25.55■■□□□ 1.68
SLC43A1-202ENST00000524995 EXOSC9Q06265 439 aaKnown RBP25.54■■□□□ 1.68
SLC43A1-202ENST00000524995 DDX46Q7L014 1031 aaKnown RBP25.54■■□□□ 1.68
SLC43A1-202ENST00000524995 ATP6V0A2Q9Y487 856 aa25.54■■□□□ 1.68
SLC43A1-202ENST00000524995 IRS4O14654 1257 aaPredicted RBP25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 SLC4A2P04920 1241 aa25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 MIER1Q8N108 512 aa25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 CELF1Q92879 486 aaKnown RBP25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 CCDC85AQ96PX6 553 aaPredicted RBP25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 PSMD1Q99460 953 aa25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 WDR90Q96KV7 1748 aa25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 IL16Q14005 1332 aa25.53■■□□□ 1.68
SLC43A1-202ENST00000524995 PI4KAP2A4QPH2 592 aa25.52■■□□□ 1.68
SLC43A1-202ENST00000524995 PI4KAP1Q8N8J0 262 aa25.52■■□□□ 1.68
SLC43A1-202ENST00000524995 METTL22Q9BUU2 404 aaPredicted RBP25.52■■□□□ 1.68
SLC43A1-202ENST00000524995 RNF123Q5XPI4 1314 aa25.52■■□□□ 1.68
SLC43A1-202ENST00000524995 TRIM28Q13263 835 aaKnown RBP25.51■■□□□ 1.67
SLC43A1-202ENST00000524995 GRAPQ13588 217 aa25.51■■□□□ 1.67
SLC43A1-202ENST00000524995 CC2D2BQ6DHV5 1058 aa25.51■■□□□ 1.67
SLC43A1-202ENST00000524995 WDR63Q8IWG1 891 aa25.51■■□□□ 1.67
SLC43A1-202ENST00000524995 LARGE2Q8N3Y3 721 aa25.51■■□□□ 1.67
SLC43A1-202ENST00000524995 GRAPLQ8TC17 118 aaPredicted RBP25.51■■□□□ 1.67
SLC43A1-202ENST00000524995 VAMP4O75379 141 aa25.5■■□□□ 1.67
SLC43A1-202ENST00000524995 AOC3Q16853 763 aa25.5■■□□□ 1.67
SLC43A1-202ENST00000524995 STK31Q9BXU1 1019 aa25.5■■□□□ 1.67
SLC43A1-202ENST00000524995 GJA3Q9Y6H8 435 aa25.5■■□□□ 1.67
SLC43A1-202ENST00000524995 FZD9O00144 591 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms