RNA–Protein interactions for RNA: ENST00000524510.1

NECTIN1-205, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 5

Gene NECTIN1, Length 832 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-205ENST00000524510 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
NECTIN1-205ENST00000524510 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.34
NECTIN1-205ENST00000524510 FZD9O00144 591 aa17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 POTEIP0CG38 1075 aa17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 POTEJP0CG39 1038 aa17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 GRIPAP1Q4V328 841 aa17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 UTP14AQ9BVJ6 771 aaKnown RBP17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
NECTIN1-205ENST00000524510 TIAM2Q8IVF5 1701 aa17.19■□□□□ 0.34
NECTIN1-205ENST00000524510 C3orf67Q6ZVT6 689 aa17.19■□□□□ 0.34
NECTIN1-205ENST00000524510 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
NECTIN1-205ENST00000524510 NLRP3Q96P20 1036 aa17.19■□□□□ 0.34
NECTIN1-205ENST00000524510 LAMB4A4D0S4 1761 aa17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 LDHDQ86WU2 507 aa17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 DDX21Q9NR30 783 aaKnown RBP eCLIP17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 LAS1LQ9Y4W2 734 aaKnown RBP17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 SNED1Q8TER0 1413 aa17.18■□□□□ 0.34
NECTIN1-205ENST00000524510 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
NECTIN1-205ENST00000524510 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
NECTIN1-205ENST00000524510 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
NECTIN1-205ENST00000524510 HACL1Q9UJ83 578 aa17.17■□□□□ 0.34
NECTIN1-205ENST00000524510 PPEF1O14829 653 aaPredicted RBP17.16■□□□□ 0.34
NECTIN1-205ENST00000524510 TCIRG1Q13488 830 aa17.16■□□□□ 0.34
NECTIN1-205ENST00000524510 NLRP10Q86W26 655 aa17.16■□□□□ 0.34
NECTIN1-205ENST00000524510 GPC2Q8N158 579 aa17.16■□□□□ 0.34
NECTIN1-205ENST00000524510 CREBZFQ9NS37 354 aa17.16■□□□□ 0.34
NECTIN1-205ENST00000524510 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
NECTIN1-205ENST00000524510 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
NECTIN1-205ENST00000524510 EPHX2P34913 555 aa17.15■□□□□ 0.34
NECTIN1-205ENST00000524510 PRKRIP1Q9H875 184 aaPredicted RBP17.15■□□□□ 0.34
NECTIN1-205ENST00000524510 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
NECTIN1-205ENST00000524510 HOXB7P09629 217 aa17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 EAPPQ56P03 285 aaPredicted RBP17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 PNMA8AQ86V59 439 aaPredicted RBP17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 CHPF2Q9P2E5 772 aa17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 PASKQ96RG2 1323 aa17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 CCDC88AQ3V6T2 1871 aa17.14■□□□□ 0.33
NECTIN1-205ENST00000524510 BBOX1O75936 387 aa17.13■□□□□ 0.33
NECTIN1-205ENST00000524510 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
NECTIN1-205ENST00000524510 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
NECTIN1-205ENST00000524510 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
NECTIN1-205ENST00000524510 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
NECTIN1-205ENST00000524510 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
NECTIN1-205ENST00000524510 DICER1Q9UPY3 1922 aaKnown RBP17.12■□□□□ 0.33
NECTIN1-205ENST00000524510 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
NECTIN1-205ENST00000524510 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
NECTIN1-205ENST00000524510 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
NECTIN1-205ENST00000524510 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
NECTIN1-205ENST00000524510 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
NECTIN1-205ENST00000524510 SP8Q8IXZ3 490 aa17.11■□□□□ 0.33
NECTIN1-205ENST00000524510 GJA3Q9Y6H8 435 aa17.11■□□□□ 0.33
NECTIN1-205ENST00000524510 ABCC4O15439 1325 aa17.11■□□□□ 0.33
NECTIN1-205ENST00000524510 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
NECTIN1-205ENST00000524510 NUP98P52948 1817 aa17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 ZNF853P0CG23 659 aa17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 DUSP27Q5VZP5 1158 aa17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 NIM1KQ8IY84 436 aa17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 RTFDC1Q9BY42 306 aaPredicted RBP17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
NECTIN1-205ENST00000524510 APAF1O14727 1248 aa17.09■□□□□ 0.33
NECTIN1-205ENST00000524510 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
NECTIN1-205ENST00000524510 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
NECTIN1-205ENST00000524510 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
NECTIN1-205ENST00000524510 ISCA1Q9BUE6 129 aa17.09■□□□□ 0.33
NECTIN1-205ENST00000524510 TMEM88BA6NKF7 163 aa17.08■□□□□ 0.32
NECTIN1-205ENST00000524510 HSPA1AP0DMV8 641 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-205ENST00000524510 HSPA1BP0DMV9 641 aaKnown RBP17.08■□□□□ 0.32
NECTIN1-205ENST00000524510 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.32
NECTIN1-205ENST00000524510 AOC3Q16853 763 aa17.08■□□□□ 0.32
NECTIN1-205ENST00000524510 MAP1SQ66K74 1059 aaPredicted RBP17.08■□□□□ 0.32
NECTIN1-205ENST00000524510 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 COL4A5P29400 1685 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 EPS15P42566 896 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 SCNN1DP51172 638 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 CALD1Q05682 793 aaKnown RBP17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 GRAPQ13588 217 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 DPP8Q6V1X1 898 aaPredicted RBP17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 MPNDQ8N594 471 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 IFT57Q9NWB7 429 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 ZNRF3Q9ULT6 936 aa17.07■□□□□ 0.32
NECTIN1-205ENST00000524510 ATP5J2-PTCD1G3V325 749 aa17.06■□□□□ 0.32
NECTIN1-205ENST00000524510 GNAI1P63096 354 aa17.06■□□□□ 0.32
NECTIN1-205ENST00000524510 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms