RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 AFDNP55196 1824 aaKnown RBP9.02□□□□□ -0.97
VPS11-201ENST00000524454 KIF13BQ9NQT8 1826 aa9.01□□□□□ -0.97
VPS11-201ENST00000524454 IPO8O15397 1037 aaKnown RBP9.01□□□□□ -0.97
VPS11-201ENST00000524454 HMGB2P26583 209 aaKnown RBP9.01□□□□□ -0.97
VPS11-201ENST00000524454 USPL1Q5W0Q7 1092 aa9.01□□□□□ -0.97
VPS11-201ENST00000524454 CENPQQ7L2Z9 268 aaPredicted RBP9.01□□□□□ -0.97
VPS11-201ENST00000524454 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
VPS11-201ENST00000524454 CHMP4AQ9BY43 222 aa9.01□□□□□ -0.97
VPS11-201ENST00000524454 USP16Q9Y5T5 823 aa9.01□□□□□ -0.97
VPS11-201ENST00000524454 BCORQ6W2J9 1755 aa9.01□□□□□ -0.97
VPS11-201ENST00000524454 USP42Q9H9J4 1324 aaKnown RBP9.01□□□□□ -0.97
VPS11-201ENST00000524454 GTPBP6O43824 516 aaPredicted RBP9□□□□□ -0.97
VPS11-201ENST00000524454 TAF7Q15545 349 aaPredicted RBP9□□□□□ -0.97
VPS11-201ENST00000524454 ZKSCAN2Q63HK3 967 aa9□□□□□ -0.97
VPS11-201ENST00000524454 B4GALNT3Q6L9W6 998 aa9□□□□□ -0.97
VPS11-201ENST00000524454 CRBNQ96SW2 442 aa9□□□□□ -0.97
VPS11-201ENST00000524454 KDM2BQ8NHM5 1336 aa9□□□□□ -0.97
VPS11-201ENST00000524454 CHL1O00533 1208 aa8.99□□□□□ -0.97
VPS11-201ENST00000524454 BCAR3O75815 825 aa8.99□□□□□ -0.97
VPS11-201ENST00000524454 STARD3NLO95772 234 aa8.99□□□□□ -0.97
VPS11-201ENST00000524454 EXOSC9Q06265 439 aaKnown RBP8.99□□□□□ -0.97
VPS11-201ENST00000524454 DDR1Q08345 913 aa8.99□□□□□ -0.97
VPS11-201ENST00000524454 GPR162Q16538 588 aa8.99□□□□□ -0.97
VPS11-201ENST00000524454 BCL2L12Q9HB09 334 aa8.99□□□□□ -0.97
VPS11-201ENST00000524454 TBC1D2BQ9UPU7 963 aa8.99□□□□□ -0.97
VPS11-201ENST00000524454 TCERG1O14776 1098 aaKnown RBP8.98□□□□□ -0.97
VPS11-201ENST00000524454 ZPR1O75312 459 aa8.98□□□□□ -0.97
VPS11-201ENST00000524454 YBX3P16989 372 aaKnown RBP eCLIP8.98□□□□□ -0.97
VPS11-201ENST00000524454 BICDL1Q6ZP65 573 aa8.98□□□□□ -0.97
VPS11-201ENST00000524454 NLGN1Q8N2Q7 840 aa8.98□□□□□ -0.97
VPS11-201ENST00000524454 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
VPS11-201ENST00000524454 LAS1LQ9Y4W2 734 aaKnown RBP8.98□□□□□ -0.97
VPS11-201ENST00000524454 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
VPS11-201ENST00000524454 BRCA1P38398 1863 aaKnown RBP8.98□□□□□ -0.97
VPS11-201ENST00000524454 CHD4Q14839 1912 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 C10orf71Q711Q0 1435 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 PXDNLA1KZ92 1463 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 PLIN1O60240 522 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 PPP1R37O75864 691 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 SNRPA1P09661 255 aaKnown RBP8.97□□□□□ -0.97
VPS11-201ENST00000524454 EIF5P55010 431 aaKnown RBP8.97□□□□□ -0.97
VPS11-201ENST00000524454 EIF4A1P60842 406 aaKnown RBP8.97□□□□□ -0.97
VPS11-201ENST00000524454 MVPQ14764 893 aaKnown RBP8.97□□□□□ -0.97
VPS11-201ENST00000524454 KRT24Q2M2I5 525 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 C20orf194Q5TEA3 1177 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 ATF7IPQ6VMQ6 1270 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 TSR2Q969E8 191 aaKnown RBP8.97□□□□□ -0.97
VPS11-201ENST00000524454 TSHZ2Q9NRE2 1034 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 MBIPQ9NS73 344 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 SMC4Q9NTJ3 1288 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 NARFQ9UHQ1 456 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 TSPYL4Q9UJ04 414 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 CD2APQ9Y5K6 639 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
VPS11-201ENST00000524454 CACNA1SQ13698 1873 aa8.96□□□□□ -0.97
VPS11-201ENST00000524454 ANKRD31Q8N7Z5 1873 aa8.96□□□□□ -0.97
VPS11-201ENST00000524454 A0A0G2JLW4 131 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 NBPF26B4DH59 902 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 POLRMTO00411 1230 aaKnown RBP8.96□□□□□ -0.98
VPS11-201ENST00000524454 VAMP4O75379 141 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 NFIXQ14938 502 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 TBC1D9BQ66K14 1250 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 NBPF10Q6P3W6 841 aaKnown RBP8.96□□□□□ -0.98
VPS11-201ENST00000524454 DZIP1LQ8IYY4 767 aaKnown RBP8.96□□□□□ -0.98
VPS11-201ENST00000524454 CCDC24Q8N4L8 307 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 NBPF15Q8N660 670 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 SSH1Q8WYL5 1049 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 TEX13AQ9BXU3 409 aaPredicted RBP8.96□□□□□ -0.98
VPS11-201ENST00000524454 CARMIL3Q8ND23 1372 aa8.96□□□□□ -0.98
VPS11-201ENST00000524454 COL11A2P13942 1736 aaPredicted RBP8.95□□□□□ -0.98
VPS11-201ENST00000524454 GIGYF1O75420 1035 aaPredicted RBP8.95□□□□□ -0.98
VPS11-201ENST00000524454 HOXB7P09629 217 aa8.95□□□□□ -0.98
VPS11-201ENST00000524454 MYL6BP14649 208 aa8.95□□□□□ -0.98
VPS11-201ENST00000524454 YY1P25490 414 aa8.95□□□□□ -0.98
VPS11-201ENST00000524454 TM4SF1P30408 202 aa8.95□□□□□ -0.98
VPS11-201ENST00000524454 IL6STP40189 918 aaPredicted RBP8.95□□□□□ -0.98
VPS11-201ENST00000524454 TWISTNBQ3B726 338 aaPredicted RBP8.95□□□□□ -0.98
VPS11-201ENST00000524454 DZIP3Q86Y13 1208 aaKnown RBP8.95□□□□□ -0.98
VPS11-201ENST00000524454 FTSJ3Q8IY81 847 aaKnown RBP8.95□□□□□ -0.98
VPS11-201ENST00000524454 NUP98P52948 1817 aa8.95□□□□□ -0.98
VPS11-201ENST00000524454 PTPRCP08575 1304 aa8.95□□□□□ -0.98
VPS11-201ENST00000524454 DLEC1Q9Y238 1755 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 A0A087WZG4 1122 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 ANXA1P04083 346 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 TRIM27P14373 513 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 DPEP1P16444 411 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 EIF2S2P20042 333 aaKnown RBP8.94□□□□□ -0.98
VPS11-201ENST00000524454 CHRNA5P30532 468 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 API5Q9BZZ5 524 aaKnown RBP8.94□□□□□ -0.98
VPS11-201ENST00000524454 ABCC4O15439 1325 aa8.94□□□□□ -0.98
VPS11-201ENST00000524454 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
VPS11-201ENST00000524454 FAM177BA6PVY3 158 aa8.93□□□□□ -0.98
VPS11-201ENST00000524454 SERPINB2P05120 415 aa8.93□□□□□ -0.98
VPS11-201ENST00000524454 LHX8Q68G74 356 aa8.93□□□□□ -0.98
VPS11-201ENST00000524454 TTLL7Q6ZT98 887 aa8.93□□□□□ -0.98
VPS11-201ENST00000524454 NPM2Q86SE8 214 aaKnown RBP8.93□□□□□ -0.98
VPS11-201ENST00000524454 MRPL50Q8N5N7 158 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms