RNA–Protein interactions for RNA: ENST00000524432.5

MACF1-227, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-227ENST00000524432 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 PREX2Q70Z35 1606 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 Q6ZUG5 572 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 AKAP2Q9Y2D5 859 aa20.47■□□□□ 0.87
MACF1-227ENST00000524432 GADD45BO75293 160 aaPredicted RBP20.46■□□□□ 0.87
MACF1-227ENST00000524432 FAM227BQ96M60 508 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 CWC25Q9NXE8 425 aaPredicted RBP20.46■□□□□ 0.87
MACF1-227ENST00000524432 RAI14Q9P0K7 980 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 TRMT112Q9UI30 125 aaKnown RBP20.46■□□□□ 0.87
MACF1-227ENST00000524432 HMGB1P09429 215 aaKnown RBP20.46■□□□□ 0.87
MACF1-227ENST00000524432 IP6K1Q92551 441 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 ARGLU1Q9NWB6 273 aaPredicted RBP20.46■□□□□ 0.87
MACF1-227ENST00000524432 TMEM63CQ9P1W3 806 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 CBX1P83916 185 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 PDCL2Q8N4E4 241 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 UBAC1Q9BSL1 405 aa20.46■□□□□ 0.87
MACF1-227ENST00000524432 ORC3Q9UBD5 711 aaPredicted RBP20.46■□□□□ 0.87
MACF1-227ENST00000524432 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
MACF1-227ENST00000524432 ANO10Q9NW15 660 aa20.45■□□□□ 0.86
MACF1-227ENST00000524432 SNX14Q9Y5W7 946 aa20.45■□□□□ 0.86
MACF1-227ENST00000524432 METP08581 1390 aa20.45■□□□□ 0.86
MACF1-227ENST00000524432 SGSM2O43147 1006 aa20.45■□□□□ 0.86
MACF1-227ENST00000524432 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
MACF1-227ENST00000524432 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 NUTM2BA6NNL0 878 aaPredicted RBP20.44■□□□□ 0.86
MACF1-227ENST00000524432 NUTM2EB1AL46 878 aaPredicted RBP20.44■□□□□ 0.86
MACF1-227ENST00000524432 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
MACF1-227ENST00000524432 PRKCSHP14314 528 aaPredicted RBP20.44■□□□□ 0.86
MACF1-227ENST00000524432 ANO6Q4KMQ2 910 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 NUTM2AQ8IVF1 878 aaPredicted RBP20.44■□□□□ 0.86
MACF1-227ENST00000524432 TNNT1P13805 278 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 CCDC186Q7Z3E2 898 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 MICU3Q86XE3 530 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 TRPM1Q7Z4N2 1603 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 CDKL5O76039 1030 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 NAPBQ9H115 298 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 HMG20BQ9P0W2 317 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 TFCP2Q12800 502 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 NOLC1Q14978 699 aaKnown RBP eCLIP20.44■□□□□ 0.86
MACF1-227ENST00000524432 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
MACF1-227ENST00000524432 CCDC47Q96A33 483 aaKnown RBP20.44■□□□□ 0.86
MACF1-227ENST00000524432 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 TIMM10P62072 90 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 PTPN14Q15678 1187 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 SAMD1Q6SPF0 538 aaPredicted RBP20.43■□□□□ 0.86
MACF1-227ENST00000524432 UNC5CLQ8IV45 518 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 DNAJC25Q9H1X3 360 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 SBNO1A3KN83 1393 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 MCM5P33992 734 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
MACF1-227ENST00000524432 SFPQP23246 707 aaKnown RBP eCLIP20.42■□□□□ 0.86
MACF1-227ENST00000524432 EDC3Q96F86 508 aaKnown RBP20.42■□□□□ 0.86
MACF1-227ENST00000524432 UVSSAQ2YD98 709 aa20.42■□□□□ 0.86
MACF1-227ENST00000524432 MCMDC2Q4G0Z9 681 aa20.42■□□□□ 0.86
MACF1-227ENST00000524432 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
MACF1-227ENST00000524432 CCDC171Q6TFL3 1326 aa20.42■□□□□ 0.86
MACF1-227ENST00000524432 KLHL10Q6JEL2 608 aa20.42■□□□□ 0.86
MACF1-227ENST00000524432 RUFY3Q7L099 469 aa20.41■□□□□ 0.86
MACF1-227ENST00000524432 PDCL3Q9H2J4 239 aa20.41■□□□□ 0.86
MACF1-227ENST00000524432 DDX21Q9NR30 783 aaKnown RBP eCLIP20.41■□□□□ 0.86
MACF1-227ENST00000524432 MYOM2P54296 1465 aa20.41■□□□□ 0.86
MACF1-227ENST00000524432 GPS2Q13227 327 aa20.41■□□□□ 0.86
MACF1-227ENST00000524432 GNL3LQ9NVN8 582 aaKnown RBP20.4■□□□□ 0.86
MACF1-227ENST00000524432 KLF18A0A0U1RQI7 1052 aa20.4■□□□□ 0.86
MACF1-227ENST00000524432 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
MACF1-227ENST00000524432 FILIP1LQ4L180 1135 aa20.4■□□□□ 0.86
MACF1-227ENST00000524432 FAM200AQ8TCP9 573 aa20.4■□□□□ 0.86
MACF1-227ENST00000524432 IFIT3O14879 490 aaKnown RBP20.39■□□□□ 0.86
MACF1-227ENST00000524432 APOBRQ0VD83 1088 aa20.39■□□□□ 0.86
MACF1-227ENST00000524432 SLC3A2P08195 630 aaKnown RBP20.39■□□□□ 0.85
MACF1-227ENST00000524432 NAP1L1P55209 391 aaKnown RBP20.39■□□□□ 0.85
MACF1-227ENST00000524432 HSP90AA4PQ58FG1 418 aa20.39■□□□□ 0.85
MACF1-227ENST00000524432 LUZP1Q86V48 1076 aa20.39■□□□□ 0.85
MACF1-227ENST00000524432 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.39■□□□□ 0.85
MACF1-227ENST00000524432 EIF4A1P60842 406 aaKnown RBP20.39■□□□□ 0.85
MACF1-227ENST00000524432 TEX35Q5T0J7 233 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 C17orf53Q8N3J3 647 aaPredicted RBP20.38■□□□□ 0.85
MACF1-227ENST00000524432 SUCLG2Q96I99 432 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 ZNF445P59923 1031 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 TYRO3Q06418 890 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 DBNDD2Q9BQY9 259 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 PRR36Q9H6K5 1346 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 KIAA0232Q92628 1395 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 OFD1O75665 1012 aa20.38■□□□□ 0.85
MACF1-227ENST00000524432 IGHMBP2P38935 993 aaKnown RBP20.37■□□□□ 0.85
MACF1-227ENST00000524432 RAD50Q92878 1312 aa20.37■□□□□ 0.85
MACF1-227ENST00000524432 PLXNC1O60486 1568 aa20.37■□□□□ 0.85
MACF1-227ENST00000524432 SMTNL1A8MU46 457 aa20.37■□□□□ 0.85
MACF1-227ENST00000524432 PPFIBP1Q86W92 1011 aa20.37■□□□□ 0.85
MACF1-227ENST00000524432 ANKRD18BA2A2Z9 1011 aa20.37■□□□□ 0.85
MACF1-227ENST00000524432 HSPA4P34932 840 aa20.37■□□□□ 0.85
MACF1-227ENST00000524432 ZNF790Q6PG37 636 aa20.37■□□□□ 0.85
MACF1-227ENST00000524432 IQSEC3Q9UPP2 1182 aaPredicted RBP20.37■□□□□ 0.85
MACF1-227ENST00000524432 BRD1O95696 1058 aa20.36■□□□□ 0.85
MACF1-227ENST00000524432 SPDYE4A6NLX3 237 aa20.36■□□□□ 0.85
MACF1-227ENST00000524432 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
MACF1-227ENST00000524432 PAG1Q9NWQ8 432 aa20.36■□□□□ 0.85
MACF1-227ENST00000524432 GOLGA8AA7E2F4 631 aa20.36■□□□□ 0.85
MACF1-227ENST00000524432 CTAGE5O15320 804 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms