RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 RIC1Q4ADV7 1423 aa24.64■■□□□ 1.54
PTP4A3-206ENST00000524028 CHL1O00533 1208 aa24.64■■□□□ 1.54
PTP4A3-206ENST00000524028 KRT24Q2M2I5 525 aa24.64■■□□□ 1.54
PTP4A3-206ENST00000524028 NECTIN2Q92692 538 aa24.64■■□□□ 1.54
PTP4A3-206ENST00000524028 IARSP41252 1262 aaKnown RBP24.63■■□□□ 1.53
PTP4A3-206ENST00000524028 RPGRQ92834 1020 aaKnown RBP24.63■■□□□ 1.53
PTP4A3-206ENST00000524028 RUNDC1Q96C34 613 aa24.63■■□□□ 1.53
PTP4A3-206ENST00000524028 L3MBTL3Q96JM7 780 aaPredicted RBP24.63■■□□□ 1.53
PTP4A3-206ENST00000524028 ADAMTS8Q9UP79 889 aa24.63■■□□□ 1.53
PTP4A3-206ENST00000524028 CHADLQ6NUI6 762 aa24.62■■□□□ 1.53
PTP4A3-206ENST00000524028 WDR43Q15061 677 aaKnown RBP eCLIP24.61■■□□□ 1.53
PTP4A3-206ENST00000524028 PARP10Q53GL7 1025 aa24.61■■□□□ 1.53
PTP4A3-206ENST00000524028 COPS6Q7L5N1 327 aa24.61■■□□□ 1.53
PTP4A3-206ENST00000524028 PPP1R42Q7Z4L9 355 aa24.61■■□□□ 1.53
PTP4A3-206ENST00000524028 PSMD1Q99460 953 aa24.61■■□□□ 1.53
PTP4A3-206ENST00000524028 FZD9O00144 591 aa24.6■■□□□ 1.53
PTP4A3-206ENST00000524028 AIMP1Q12904 312 aaKnown RBP24.6■■□□□ 1.53
PTP4A3-206ENST00000524028 XAGE3Q8WTP9 111 aa24.6■■□□□ 1.53
PTP4A3-206ENST00000524028 RBM17Q96I25 401 aaKnown RBP24.6■■□□□ 1.53
PTP4A3-206ENST00000524028 CRAMP1Q96RY5 1269 aa24.6■■□□□ 1.53
PTP4A3-206ENST00000524028 TAF1DQ9H5J8 278 aaPredicted RBP24.6■■□□□ 1.53
PTP4A3-206ENST00000524028 LAS1LQ9Y4W2 734 aaKnown RBP24.6■■□□□ 1.53
PTP4A3-206ENST00000524028 IQCA1LA6NCM1 817 aa24.59■■□□□ 1.53
PTP4A3-206ENST00000524028 SLC10A5Q5PT55 438 aa24.59■■□□□ 1.53
PTP4A3-206ENST00000524028 UTP14AQ9BVJ6 771 aaKnown RBP24.59■■□□□ 1.53
PTP4A3-206ENST00000524028 CC2D2BQ6DHV5 1058 aa24.58■■□□□ 1.53
PTP4A3-206ENST00000524028 TCERG1O14776 1098 aaKnown RBP24.57■■□□□ 1.52
PTP4A3-206ENST00000524028 PPEF1O14829 653 aaPredicted RBP24.57■■□□□ 1.52
PTP4A3-206ENST00000524028 DDX21Q9NR30 783 aaKnown RBP eCLIP24.57■■□□□ 1.52
PTP4A3-206ENST00000524028 COL4A5P29400 1685 aa24.56■■□□□ 1.52
PTP4A3-206ENST00000524028 NLRP3Q96P20 1036 aa24.56■■□□□ 1.52
PTP4A3-206ENST00000524028 PRKRIP1Q9H875 184 aaPredicted RBP24.56■■□□□ 1.52
PTP4A3-206ENST00000524028 NLRP10Q86W26 655 aa24.55■■□□□ 1.52
PTP4A3-206ENST00000524028 LDHDQ86WU2 507 aa24.55■■□□□ 1.52
PTP4A3-206ENST00000524028 CHPF2Q9P2E5 772 aa24.55■■□□□ 1.52
PTP4A3-206ENST00000524028 TCIRG1Q13488 830 aa24.54■■□□□ 1.52
PTP4A3-206ENST00000524028 HACL1Q9UJ83 578 aa24.54■■□□□ 1.52
PTP4A3-206ENST00000524028 HSP90AB3PQ58FF7 597 aa24.53■■□□□ 1.52
PTP4A3-206ENST00000524028 JDP2Q8WYK2 163 aa24.53■■□□□ 1.52
PTP4A3-206ENST00000524028 RNF123Q5XPI4 1314 aa24.53■■□□□ 1.52
PTP4A3-206ENST00000524028 PASKQ96RG2 1323 aa24.53■■□□□ 1.52
PTP4A3-206ENST00000524028 HCLS1P14317 486 aaPredicted RBP24.52■■□□□ 1.52
PTP4A3-206ENST00000524028 EPHX2P34913 555 aa24.52■■□□□ 1.52
PTP4A3-206ENST00000524028 GRIPAP1Q4V328 841 aa24.52■■□□□ 1.52
PTP4A3-206ENST00000524028 EAPPQ56P03 285 aaPredicted RBP24.52■■□□□ 1.52
PTP4A3-206ENST00000524028 GPC2Q8N158 579 aa24.52■■□□□ 1.52
PTP4A3-206ENST00000524028 CREBZFQ9NS37 354 aa24.52■■□□□ 1.52
PTP4A3-206ENST00000524028 SCN4AP35499 1836 aa24.51■■□□□ 1.51
PTP4A3-206ENST00000524028 HDGFL1Q5TGJ6 251 aa24.51■■□□□ 1.51
PTP4A3-206ENST00000524028 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
PTP4A3-206ENST00000524028 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
PTP4A3-206ENST00000524028 ATP6V0A2Q9Y487 856 aa24.51■■□□□ 1.51
PTP4A3-206ENST00000524028 ABCC4O15439 1325 aa24.51■■□□□ 1.51
PTP4A3-206ENST00000524028 PCNTO95613 3336 aa24.5■■□□□ 1.51
PTP4A3-206ENST00000524028 ITGBL1O95965 494 aaPredicted RBP24.5■■□□□ 1.51
PTP4A3-206ENST00000524028 LARGE2Q8N3Y3 721 aa24.5■■□□□ 1.51
PTP4A3-206ENST00000524028 TRMT112Q9UI30 125 aaKnown RBP24.5■■□□□ 1.51
PTP4A3-206ENST00000524028 HOXB7P09629 217 aa24.49■■□□□ 1.51
PTP4A3-206ENST00000524028 EIF6P56537 245 aaKnown RBP24.49■■□□□ 1.51
PTP4A3-206ENST00000524028 COL13A1Q5TAT6 717 aaPredicted RBP24.49■■□□□ 1.51
PTP4A3-206ENST00000524028 MBIPQ9NS73 344 aa24.49■■□□□ 1.51
PTP4A3-206ENST00000524028 GJA3Q9Y6H8 435 aa24.49■■□□□ 1.51
PTP4A3-206ENST00000524028 ZNF853P0CG23 659 aa24.48■■□□□ 1.51
PTP4A3-206ENST00000524028 DUSP27Q5VZP5 1158 aa24.48■■□□□ 1.51
PTP4A3-206ENST00000524028 PLBD2Q8NHP8 589 aa24.48■■□□□ 1.51
PTP4A3-206ENST00000524028 SH3TC1Q8TE82 1336 aa24.47■■□□□ 1.51
PTP4A3-206ENST00000524028 APAF1O14727 1248 aa24.47■■□□□ 1.51
PTP4A3-206ENST00000524028 DBF4Q9UBU7 674 aaPredicted RBP24.47■■□□□ 1.51
PTP4A3-206ENST00000524028 MKRN1Q9UHC7 482 aaKnown RBP24.47■■□□□ 1.51
PTP4A3-206ENST00000524028 CLEC11AQ9Y240 323 aa24.47■■□□□ 1.51
PTP4A3-206ENST00000524028 ADAMTSL1Q8N6G6 1762 aa24.47■■□□□ 1.51
PTP4A3-206ENST00000524028 BBOX1O75936 387 aa24.46■■□□□ 1.51
PTP4A3-206ENST00000524028 AOC3Q16853 763 aa24.46■■□□□ 1.51
PTP4A3-206ENST00000524028 ANKRD13DQ6ZTN6 518 aa24.46■■□□□ 1.51
PTP4A3-206ENST00000524028 PNMA8AQ86V59 439 aaPredicted RBP24.46■■□□□ 1.51
PTP4A3-206ENST00000524028 ANKRD36CQ5JPF3 1778 aa24.46■■□□□ 1.51
PTP4A3-206ENST00000524028 PPIP5K2O43314 1243 aa24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 HSPA1AP0DMV8 641 aaKnown RBP24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 HSPA1BP0DMV9 641 aaKnown RBP24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 SCNN1DP51172 638 aa24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 MAP1SQ66K74 1059 aaPredicted RBP24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 SP8Q8IXZ3 490 aa24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 ISCA1Q9BUE6 129 aa24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 RTFDC1Q9BY42 306 aaPredicted RBP24.45■■□□□ 1.5
PTP4A3-206ENST00000524028 NIM1KQ8IY84 436 aa24.44■■□□□ 1.5
PTP4A3-206ENST00000524028 TMX4Q9H1E5 349 aaPredicted RBP24.44■■□□□ 1.5
PTP4A3-206ENST00000524028 LTBP1Q14766 1721 aa24.44■■□□□ 1.5
PTP4A3-206ENST00000524028 ATP5J2-PTCD1G3V325 749 aa24.43■■□□□ 1.5
PTP4A3-206ENST00000524028 EPS15P42566 896 aa24.43■■□□□ 1.5
PTP4A3-206ENST00000524028 DDX46Q7L014 1031 aaKnown RBP24.43■■□□□ 1.5
PTP4A3-206ENST00000524028 CNTROBQ8N137 903 aa24.43■■□□□ 1.5
PTP4A3-206ENST00000524028 VPS33BQ9H267 617 aa24.43■■□□□ 1.5
PTP4A3-206ENST00000524028 HYPKQ9NX55 129 aa24.43■■□□□ 1.5
PTP4A3-206ENST00000524028 GRAPQ13588 217 aa24.42■■□□□ 1.5
PTP4A3-206ENST00000524028 GRAPLQ8TC17 118 aaPredicted RBP24.42■■□□□ 1.5
PTP4A3-206ENST00000524028 FAM89AQ96GI7 184 aa24.42■■□□□ 1.5
PTP4A3-206ENST00000524028 LAMB2P55268 1798 aa24.42■■□□□ 1.5
PTP4A3-206ENST00000524028 TMEM88BA6NKF7 163 aa24.41■■□□□ 1.5
PTP4A3-206ENST00000524028 DPP8Q6V1X1 898 aaPredicted RBP24.41■■□□□ 1.5
PTP4A3-206ENST00000524028 MPNDQ8N594 471 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms