RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 GRIPAP1Q4V328 841 aa11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 LDHDQ86WU2 507 aa11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 UTP14AQ9BVJ6 771 aaKnown RBP11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 ADAMTS8Q9UP79 889 aa11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 UBN2Q6ZU65 1347 aa11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
CTNNA1-240ENST00000523912 DDNO94850 711 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 HDGFL1Q5TGJ6 251 aa11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 SUSD4Q5VX71 490 aa11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 ZNF34Q8IZ26 560 aa11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 PRDM10Q9NQV6 1147 aa11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 ZNF277Q9NRM2 450 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 PASKQ96RG2 1323 aa11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 SCN4AP35499 1836 aa11.53□□□□□ -0.56
CTNNA1-240ENST00000523912 SLX4Q8IY92 1834 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 NTSR2O95665 410 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 HOXA10P31260 410 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 PDIA6Q15084 440 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 PROSER3Q2NL68 480 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 XAGE3Q8WTP9 111 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 JDP2Q8WYK2 163 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 NLRP3Q96P20 1036 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 PSMD1Q99460 953 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 TAF1DQ9H5J8 278 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
CTNNA1-240ENST00000523912 PPEF1O14829 653 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 ANXA1P04083 346 aa11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 LRP10Q7Z4F1 713 aa11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 CRAMP1Q96RY5 1269 aa11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 DBF4Q9UBU7 674 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-240ENST00000523912 CAPN15O75808 1086 aa11.5□□□□□ -0.57
CTNNA1-240ENST00000523912 PNMA8AQ86V59 439 aaPredicted RBP11.5□□□□□ -0.57
CTNNA1-240ENST00000523912 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
CTNNA1-240ENST00000523912 IFT57Q9NWB7 429 aa11.5□□□□□ -0.57
CTNNA1-240ENST00000523912 HYPKQ9NX55 129 aa11.5□□□□□ -0.57
CTNNA1-240ENST00000523912 CHPF2Q9P2E5 772 aa11.5□□□□□ -0.57
CTNNA1-240ENST00000523912 SH3TC1Q8TE82 1336 aa11.5□□□□□ -0.57
CTNNA1-240ENST00000523912 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 ITGBL1O95965 494 aaPredicted RBP11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 EIF6P56537 245 aaKnown RBP11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 GNAI1P63096 354 aa11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 TCIRG1Q13488 830 aa11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 MKRN1Q9UHC7 482 aaKnown RBP11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
CTNNA1-240ENST00000523912 FZD9O00144 591 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 APAF1O14727 1248 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 CTCFP49711 727 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 SLC10A5Q5PT55 438 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 DUSP27Q5VZP5 1158 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 DDX46Q7L014 1031 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 NLRP10Q86W26 655 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 LARGE2Q8N3Y3 721 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 SUPT20HQ8NEM7 779 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 PLBD2Q8NHP8 589 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 MBIPQ9NS73 344 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 HACL1Q9UJ83 578 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
CTNNA1-240ENST00000523912 NUP98P52948 1817 aa11.47□□□□□ -0.57
CTNNA1-240ENST00000523912 HSP90B1P14625 803 aaKnown RBP11.47□□□□□ -0.57
CTNNA1-240ENST00000523912 LMOD1P29536 600 aaPredicted RBP11.47□□□□□ -0.57
CTNNA1-240ENST00000523912 NIM1KQ8IY84 436 aa11.47□□□□□ -0.57
CTNNA1-240ENST00000523912 GPC2Q8N158 579 aa11.47□□□□□ -0.57
CTNNA1-240ENST00000523912 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
CTNNA1-240ENST00000523912 WBP1LQ9NX94 342 aa11.47□□□□□ -0.57
CTNNA1-240ENST00000523912 CACNA1SQ13698 1873 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 ABCC4O15439 1325 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 RASSF10A6NK89 507 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 TCERG1O14776 1098 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 FOXN1O15353 648 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 PPIP5K2O43314 1243 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 BBOX1O75936 387 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 HCLS1P14317 486 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 EPHX2P34913 555 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 EAPPQ56P03 285 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 TMC4Q7Z404 712 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 ATP6V0A2Q9Y487 856 aa11.46□□□□□ -0.57
CTNNA1-240ENST00000523912 SNED1Q8TER0 1413 aa11.45□□□□□ -0.58
CTNNA1-240ENST00000523912 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
CTNNA1-240ENST00000523912 VEGFBP49765 207 aa11.45□□□□□ -0.58
CTNNA1-240ENST00000523912 GRAPQ13588 217 aa11.45□□□□□ -0.58
CTNNA1-240ENST00000523912 DPP8Q6V1X1 898 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-240ENST00000523912 RIC3Q7Z5B4 369 aa11.45□□□□□ -0.58
CTNNA1-240ENST00000523912 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms