RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 MORC1Q86VD1 984 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 KIAA1958Q8N8K9 716 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 GIMAP1Q8WWP7 306 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 TANGO6Q9C0B7 1094 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.72□□□□□ -1.17
SDC2-208ENST00000523877 IRAK4Q9NWZ3 460 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 COMMD8Q9NX08 183 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 RABL2AQ9UBK7 228 aaPredicted RBP7.72□□□□□ -1.17
SDC2-208ENST00000523877 ITM2BQ9Y287 266 aa7.72□□□□□ -1.17
SDC2-208ENST00000523877 KIF21AQ7Z4S6 1674 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 CAND2O75155 1236 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 E2F6O75461 281 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 RBP3P10745 1247 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 VAMP1P23763 118 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 RRM1P23921 792 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 PBX2P40425 430 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 PRPF4BQ13523 1007 aaKnown RBP7.71□□□□□ -1.18
SDC2-208ENST00000523877 TCEAL1Q15170 157 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 LONRF1Q17RB8 773 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 CCDC158Q5M9N0 1113 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 AP1ARQ63HQ0 302 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 DAAM2Q86T65 1068 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 CHPFQ8IZ52 775 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 SAMD14Q8IZD0 417 aaPredicted RBP7.71□□□□□ -1.18
SDC2-208ENST00000523877 ZBTB9Q96C00 473 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 UIMC1Q96RL1 719 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 MAP3K14Q99558 947 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 SLX1AQ9BQ83 275 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 TACO1Q9BSH4 297 aaKnown RBP7.71□□□□□ -1.18
SDC2-208ENST00000523877 PCDH12Q9NPG4 1184 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 TRPV5Q9NQA5 729 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 RYDENQ9NUL5 291 aaKnown RBP7.71□□□□□ -1.18
SDC2-208ENST00000523877 EXOC1Q9NV70 894 aa7.71□□□□□ -1.18
SDC2-208ENST00000523877 C6orf203Q9P0P8 240 aaPredicted RBP7.71□□□□□ -1.18
SDC2-208ENST00000523877 MRC2Q9UBG0 1479 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 ATAD2BQ9ULI0 1458 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 CHL1O00533 1208 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 CDKL5O76039 1030 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 HNRNPCP07910 306 aaKnown RBP eCLIP7.7□□□□□ -1.18
SDC2-208ENST00000523877 IMPDH2P12268 514 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 ERCC5P28715 1186 aaPredicted RBP7.7□□□□□ -1.18
SDC2-208ENST00000523877 ATP6V1AP38606 617 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 TAF11Q15544 211 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 TAF7Q15545 349 aaPredicted RBP7.7□□□□□ -1.18
SDC2-208ENST00000523877 ENOX2Q16206 610 aaKnown RBP7.7□□□□□ -1.18
SDC2-208ENST00000523877 MAP9Q49MG5 647 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 DUSP27Q5VZP5 1158 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 ARL6IP6Q8N6S5 226 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 DCAF11Q8TEB1 546 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 PBXIP1Q96AQ6 731 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 UNC45AQ9H3U1 944 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 VRTNQ9H8Y1 702 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 POLG2Q9UHN1 485 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 ASAP1Q9ULH1 1129 aa7.7□□□□□ -1.18
SDC2-208ENST00000523877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.7□□□□□ -1.18
SDC2-208ENST00000523877 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 FAM25EA8MYX2 175 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 ECEL1O95672 775 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 RIPK4P57078 832 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 MLECQ14165 292 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 KRT72Q14CN4 511 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 PPP2R5AQ15172 486 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 FXNQ16595 210 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 PARP10Q53GL7 1025 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 RBM12BQ8IXT5 1001 aaKnown RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 CLASRPQ8N2M8 674 aaKnown RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 JDP2Q8WYK2 163 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 RNPC3Q96LT9 517 aaKnown RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 PCMTD1Q96MG8 357 aaPredicted RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 CD248Q9HCU0 757 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 AVENQ9NQS1 362 aaPredicted RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 TRMT1Q9NXH9 659 aaKnown RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 DDX56Q9NY93 547 aaKnown RBP7.69□□□□□ -1.18
SDC2-208ENST00000523877 CLIP2Q9UDT6 1046 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
SDC2-208ENST00000523877 IFRD1O00458 451 aaPredicted RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 PLIN1O60240 522 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 OFD1O75665 1012 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 KRT38O76015 456 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 HOXD10P28358 340 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 ADCY2Q08462 1091 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 PTK7Q13308 1070 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 BIRC3Q13489 604 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 INF2Q27J81 1249 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 CCDC93Q567U6 631 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 DNAJC21Q5F1R6 531 aaKnown RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 ANKRD45Q5TZF3 282 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 MCTP2Q6DN12 878 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 SYNE3Q6ZMZ3 975 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 BRSK2Q8IWQ3 736 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 NLGN1Q8N2Q7 840 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 GABPB2Q8TAK5 448 aaPredicted RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 DHX38Q92620 1227 aaKnown RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 MPHOSPH6Q99547 160 aaKnown RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 DUSP9Q99956 384 aaKnown RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 MAK16Q9BXY0 300 aaKnown RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 PDGFDQ9GZP0 370 aaPredicted RBP7.68□□□□□ -1.18
SDC2-208ENST00000523877 DCAF16Q9NXF7 216 aa7.68□□□□□ -1.18
SDC2-208ENST00000523877 MKRN1Q9UHC7 482 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms