RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 NARFQ9UHQ1 456 aa11.59□□□□□ -0.55
CCNC-215ENST00000523799 ANKRD31Q8N7Z5 1873 aa11.58□□□□□ -0.56
CCNC-215ENST00000523799 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
CCNC-215ENST00000523799 ZNF622Q969S3 477 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCNC-215ENST00000523799 ABT1Q9ULW3 272 aaKnown RBP11.58□□□□□ -0.56
CCNC-215ENST00000523799 SOS1Q07889 1333 aaPredicted RBP11.58□□□□□ -0.56
CCNC-215ENST00000523799 POTEB3A0JP26 581 aa11.57□□□□□ -0.56
CCNC-215ENST00000523799 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
CCNC-215ENST00000523799 PDE6BP35913 854 aa11.57□□□□□ -0.56
CCNC-215ENST00000523799 ECE1P42892 770 aa11.57□□□□□ -0.56
CCNC-215ENST00000523799 PLEKHO1Q53GL0 409 aaPredicted RBP11.57□□□□□ -0.56
CCNC-215ENST00000523799 EAPPQ56P03 285 aaPredicted RBP11.57□□□□□ -0.56
CCNC-215ENST00000523799 POTEBQ6S5H4 581 aa11.57□□□□□ -0.56
CCNC-215ENST00000523799 PNMA8AQ86V59 439 aaPredicted RBP11.57□□□□□ -0.56
CCNC-215ENST00000523799 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
CCNC-215ENST00000523799 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 ST20-MTHFSA0A0A6YYL1 179 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
CCNC-215ENST00000523799 MTHFSP49914 203 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 AMOTQ4VCS5 1084 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 CNTROBQ8N137 903 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 ZNF710Q8N1W2 664 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 NFATC2IPQ8NCF5 419 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 BRIP1Q9BX63 1249 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 KRTAP3-3Q9BYR6 98 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 KRTAP3-2Q9BYR7 98 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 HACL1Q9UJ83 578 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
CCNC-215ENST00000523799 COL15A1P39059 1388 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 CARMIL3Q8ND23 1372 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 CA12O43570 354 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 ZNF530Q6P9A1 599 aaPredicted RBP11.55□□□□□ -0.56
CCNC-215ENST00000523799 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 CAPNS2Q96L46 248 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
CCNC-215ENST00000523799 MCOLN1Q9GZU1 580 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 SLX4Q8IY92 1834 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 TRPM7Q96QT4 1865 aa11.55□□□□□ -0.56
CCNC-215ENST00000523799 SCN11AQ9UI33 1791 aa11.54□□□□□ -0.56
CCNC-215ENST00000523799 EPHX2P34913 555 aa11.54□□□□□ -0.56
CCNC-215ENST00000523799 MAP2K2P36507 400 aa11.54□□□□□ -0.56
CCNC-215ENST00000523799 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
CCNC-215ENST00000523799 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
CCNC-215ENST00000523799 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
CCNC-215ENST00000523799 BCL2L12Q9HB09 334 aa11.54□□□□□ -0.56
CCNC-215ENST00000523799 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
CCNC-215ENST00000523799 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
CCNC-215ENST00000523799 CYP19A1P11511 503 aaPredicted RBP11.53□□□□□ -0.56
CCNC-215ENST00000523799 HOXB1P14653 301 aaPredicted RBP11.53□□□□□ -0.56
CCNC-215ENST00000523799 EIF4A2Q14240 407 aaKnown RBP11.53□□□□□ -0.56
CCNC-215ENST00000523799 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
CCNC-215ENST00000523799 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
CCNC-215ENST00000523799 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCNC-215ENST00000523799 PRPF38BQ5VTL8 546 aaKnown RBP11.52□□□□□ -0.57
CCNC-215ENST00000523799 STYK1Q6J9G0 422 aa11.52□□□□□ -0.57
CCNC-215ENST00000523799 POLKQ9UBT6 870 aa11.52□□□□□ -0.57
CCNC-215ENST00000523799 CDCA8Q53HL2 280 aa11.51□□□□□ -0.57
CCNC-215ENST00000523799 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
CCNC-215ENST00000523799 A0A087WZG4 1122 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 RIMBP2O15034 1052 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 DGKZQ13574 1117 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 PRR5LQ6MZQ0 368 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 MASTLQ96GX5 879 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 ZBTB1Q9Y2K1 713 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 ZNF541Q9H0D2 1346 aa11.5□□□□□ -0.57
CCNC-215ENST00000523799 SRGNP10124 158 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 FOXK1P85037 733 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 FKBP4Q02790 459 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCNC-215ENST00000523799 GRM1Q13255 1194 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 DSG2Q14126 1118 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 GPC2Q8N158 579 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 RNF123Q5XPI4 1314 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
CCNC-215ENST00000523799 BRPF1P55201 1214 aaPredicted RBP11.48□□□□□ -0.57
CCNC-215ENST00000523799 TBC1D9BQ66K14 1250 aa11.48□□□□□ -0.57
CCNC-215ENST00000523799 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
CCNC-215ENST00000523799 TLL2Q9Y6L7 1015 aa11.48□□□□□ -0.57
CCNC-215ENST00000523799 FZD9O00144 591 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 NPHP1O15259 732 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 PDE4AP27815 886 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 EIF5P55010 431 aaKnown RBP11.47□□□□□ -0.57
CCNC-215ENST00000523799 ST5P78524 1137 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 CNBD1Q8NA66 436 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 C7orf43Q8WVR3 580 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
CCNC-215ENST00000523799 AOC2O75106 756 aa11.46□□□□□ -0.57
CCNC-215ENST00000523799 STARD3NLO95772 234 aa11.46□□□□□ -0.57
CCNC-215ENST00000523799 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
CCNC-215ENST00000523799 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
CCNC-215ENST00000523799 CST9Q5W186 159 aa11.46□□□□□ -0.57
CCNC-215ENST00000523799 HHIPL1Q96JK4 782 aa11.46□□□□□ -0.57
CCNC-215ENST00000523799 SETDB2Q96T68 719 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms