RNA–Protein interactions for RNA: ENST00000523702.5

CPS1-211, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-211ENST00000523702 WWC3Q9ULE0 1092 aa9.51□□□□□ -0.89
CPS1-211ENST00000523702 RTCBQ9Y3I0 505 aaKnown RBP9.51□□□□□ -0.89
CPS1-211ENST00000523702 KCNMB2Q9Y691 235 aa9.51□□□□□ -0.89
CPS1-211ENST00000523702 SNRPBP14678 240 aaKnown RBP9.5□□□□□ -0.89
CPS1-211ENST00000523702 TYRO3Q06418 890 aa9.5□□□□□ -0.89
CPS1-211ENST00000523702 FMR1Q06787 632 aaKnown RBP eCLIP9.5□□□□□ -0.89
CPS1-211ENST00000523702 UBAP2LQ14157 1087 aaKnown RBP9.5□□□□□ -0.89
CPS1-211ENST00000523702 TRIP4Q15650 581 aaPredicted RBP9.5□□□□□ -0.89
CPS1-211ENST00000523702 DBN1Q16643 649 aa9.5□□□□□ -0.89
CPS1-211ENST00000523702 CMTR1Q8N1G2 835 aaKnown RBP9.5□□□□□ -0.89
CPS1-211ENST00000523702 CEP63Q96MT8 703 aa9.5□□□□□ -0.89
CPS1-211ENST00000523702 KIAA1522Q9P206 1035 aaPredicted RBP9.5□□□□□ -0.89
CPS1-211ENST00000523702 HIF1AQ16665 826 aa9.49□□□□□ -0.89
CPS1-211ENST00000523702 RIPOR1Q6ZS17 1223 aa9.49□□□□□ -0.89
CPS1-211ENST00000523702 PIK3R5Q8WYR1 880 aa9.49□□□□□ -0.89
CPS1-211ENST00000523702 ARSDP51689 593 aa9.48□□□□□ -0.89
CPS1-211ENST00000523702 GRIN2CQ14957 1233 aa9.48□□□□□ -0.89
CPS1-211ENST00000523702 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
CPS1-211ENST00000523702 DMRTB1Q96MA1 342 aa9.48□□□□□ -0.89
CPS1-211ENST00000523702 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
CPS1-211ENST00000523702 POTECB2RU33 542 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 MAPK8P45983 427 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 SFSWAPQ12872 951 aaKnown RBP9.47□□□□□ -0.89
CPS1-211ENST00000523702 PDE3BQ13370 1112 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 ORC1Q13415 861 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 PGBD3Q8N328 593 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 TRIM47Q96LD4 638 aa9.47□□□□□ -0.89
CPS1-211ENST00000523702 USP5P45974 858 aa9.46□□□□□ -0.9
CPS1-211ENST00000523702 COL19A1Q14993 1142 aa9.46□□□□□ -0.9
CPS1-211ENST00000523702 ALKBH8Q96BT7 664 aaKnown RBP9.46□□□□□ -0.9
CPS1-211ENST00000523702 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
CPS1-211ENST00000523702 E9PSI1 815 aa9.45□□□□□ -0.9
CPS1-211ENST00000523702 MRRFQ96E11 262 aaKnown RBP9.45□□□□□ -0.9
CPS1-211ENST00000523702 BRD7Q9NPI1 651 aa9.45□□□□□ -0.9
CPS1-211ENST00000523702 FAM13BQ9NYF5 915 aa9.45□□□□□ -0.9
CPS1-211ENST00000523702 FOXD3Q9UJU5 478 aaPredicted RBP9.45□□□□□ -0.9
CPS1-211ENST00000523702 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
CPS1-211ENST00000523702 EFHC2Q5JST6 749 aa9.44□□□□□ -0.9
CPS1-211ENST00000523702 SAMD5Q5TGI4 173 aa9.44□□□□□ -0.9
CPS1-211ENST00000523702 CFHR5Q9BXR6 569 aa9.44□□□□□ -0.9
CPS1-211ENST00000523702 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
CPS1-211ENST00000523702 TMEM63CQ9P1W3 806 aa9.44□□□□□ -0.9
CPS1-211ENST00000523702 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
CPS1-211ENST00000523702 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
CPS1-211ENST00000523702 BNIP3LO60238 219 aa9.43□□□□□ -0.9
CPS1-211ENST00000523702 LDHBP07195 334 aaKnown RBP9.43□□□□□ -0.9
CPS1-211ENST00000523702 PCSK2P16519 638 aa9.43□□□□□ -0.9
CPS1-211ENST00000523702 ZNF326Q5BKZ1 582 aaKnown RBP9.43□□□□□ -0.9
CPS1-211ENST00000523702 USPL1Q5W0Q7 1092 aa9.43□□□□□ -0.9
CPS1-211ENST00000523702 XKR5Q6UX68 686 aa9.43□□□□□ -0.9
CPS1-211ENST00000523702 NUCKS1Q9H1E3 243 aaKnown RBP9.43□□□□□ -0.9
CPS1-211ENST00000523702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.43□□□□□ -0.9
CPS1-211ENST00000523702 EFSO43281 561 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 XYLBO75191 536 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 TNP2Q05952 138 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 ENOX2Q16206 610 aaKnown RBP9.42□□□□□ -0.9
CPS1-211ENST00000523702 KIFC2Q96AC6 838 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 FAM161BQ96MY7 647 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 NDFIP2Q9NV92 336 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 CNTN3Q9P232 1028 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 PCDHGC4Q9Y5F7 938 aa9.42□□□□□ -0.9
CPS1-211ENST00000523702 PNMA6FA0A0J9YX94 578 aa9.41□□□□□ -0.9
CPS1-211ENST00000523702 EIF1AYO14602 144 aaKnown RBP9.41□□□□□ -0.9
CPS1-211ENST00000523702 KHNYNO15037 678 aaKnown RBP9.41□□□□□ -0.9
CPS1-211ENST00000523702 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
CPS1-211ENST00000523702 MAPTP10636 758 aaKnown RBP9.41□□□□□ -0.9
CPS1-211ENST00000523702 Q6ZNB5 142 aa9.41□□□□□ -0.9
CPS1-211ENST00000523702 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
CPS1-211ENST00000523702 CSRNP1Q96S65 589 aa9.41□□□□□ -0.9
CPS1-211ENST00000523702 ELP3Q9H9T3 547 aa9.41□□□□□ -0.9
CPS1-211ENST00000523702 SASH3O75995 380 aa9.4□□□□□ -0.9
CPS1-211ENST00000523702 ITGA6P23229 1130 aa9.4□□□□□ -0.9
CPS1-211ENST00000523702 TARSP26639 723 aaKnown RBP9.4□□□□□ -0.9
CPS1-211ENST00000523702 ZNF438Q7Z4V0 828 aa9.4□□□□□ -0.9
CPS1-211ENST00000523702 TTC16Q8NEE8 873 aa9.4□□□□□ -0.9
CPS1-211ENST00000523702 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.9
CPS1-211ENST00000523702 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.9
CPS1-211ENST00000523702 DUSP9Q99956 384 aaKnown RBP9.4□□□□□ -0.9
CPS1-211ENST00000523702 PARP2Q9UGN5 583 aa9.4□□□□□ -0.9
CPS1-211ENST00000523702 KCNH4Q9UQ05 1017 aa9.4□□□□□ -0.9
CPS1-211ENST00000523702 C11orf95C9JLR9 678 aaPredicted RBP9.39□□□□□ -0.91
CPS1-211ENST00000523702 EGFRP00533 1210 aa9.39□□□□□ -0.91
CPS1-211ENST00000523702 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
CPS1-211ENST00000523702 FAM157BP0CG42 384 aa9.39□□□□□ -0.91
CPS1-211ENST00000523702 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
CPS1-211ENST00000523702 KCNQ4P56696 695 aa9.39□□□□□ -0.91
CPS1-211ENST00000523702 LBRQ14739 615 aaKnown RBP9.39□□□□□ -0.91
CPS1-211ENST00000523702 KRT25Q7Z3Z0 450 aa9.39□□□□□ -0.91
CPS1-211ENST00000523702 GTPBP3Q969Y2 492 aaKnown RBP9.39□□□□□ -0.91
CPS1-211ENST00000523702 GSX2Q9BZM3 304 aa9.39□□□□□ -0.91
CPS1-211ENST00000523702 FNDC3AQ9Y2H6 1198 aaKnown RBP9.39□□□□□ -0.91
CPS1-211ENST00000523702 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
CPS1-211ENST00000523702 PDE12Q6L8Q7 609 aaKnown RBP9.38□□□□□ -0.91
CPS1-211ENST00000523702 C1orf127Q8N9H9 656 aa9.38□□□□□ -0.91
CPS1-211ENST00000523702 CHRDQ9H2X0 955 aa9.38□□□□□ -0.91
CPS1-211ENST00000523702 ZFYVE28Q9HCC9 887 aa9.38□□□□□ -0.91
CPS1-211ENST00000523702 H7C1W4 665 aa9.37□□□□□ -0.91
CPS1-211ENST00000523702 GPR25O00155 361 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms