RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
PCM1-219ENST00000523540 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
PCM1-219ENST00000523540 KLF15Q9UIH9 416 aa8.71□□□□□ -1.02
PCM1-219ENST00000523540 FKBP5Q13451 457 aaPredicted RBP8.7□□□□□ -1.02
PCM1-219ENST00000523540 CHSY3Q70JA7 882 aa8.7□□□□□ -1.02
PCM1-219ENST00000523540 MYO19Q96H55 970 aa8.7□□□□□ -1.02
PCM1-219ENST00000523540 ZCCHC2Q9C0B9 1178 aaKnown RBP8.7□□□□□ -1.02
PCM1-219ENST00000523540 PCDHGC4Q9Y5F7 938 aa8.7□□□□□ -1.02
PCM1-219ENST00000523540 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
PCM1-219ENST00000523540 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
PCM1-219ENST00000523540 LAMC2Q13753 1193 aa8.69□□□□□ -1.02
PCM1-219ENST00000523540 RTN1Q16799 776 aa8.69□□□□□ -1.02
PCM1-219ENST00000523540 FAM182BQ5T319 152 aa8.69□□□□□ -1.02
PCM1-219ENST00000523540 SH3PXD2AQ5TCZ1 1133 aa8.69□□□□□ -1.02
PCM1-219ENST00000523540 CHMP7Q8WUX9 453 aaPredicted RBP8.69□□□□□ -1.02
PCM1-219ENST00000523540 AVENQ9NQS1 362 aaPredicted RBP8.69□□□□□ -1.02
PCM1-219ENST00000523540 FAM157BP0CG42 384 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 DOC2BQ14184 412 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 IER5Q5VY09 327 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 FCHSD1Q86WN1 690 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 ZIC5Q96T25 663 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 SEMA6BQ9H3T3 888 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 ZNF232Q9UNY5 417 aa8.68□□□□□ -1.02
PCM1-219ENST00000523540 PTCD1O75127 700 aaKnown RBP8.67□□□□□ -1.02
PCM1-219ENST00000523540 BRD1O95696 1058 aa8.67□□□□□ -1.02
PCM1-219ENST00000523540 TXLNAP40222 546 aa8.67□□□□□ -1.02
PCM1-219ENST00000523540 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
PCM1-219ENST00000523540 A0A1W2PNR3 127 aa8.66□□□□□ -1.02
PCM1-219ENST00000523540 ADH6P28332 368 aa8.66□□□□□ -1.02
PCM1-219ENST00000523540 SCNN1AP37088 669 aa8.66□□□□□ -1.02
PCM1-219ENST00000523540 CAPN12Q6ZSI9 719 aa8.66□□□□□ -1.02
PCM1-219ENST00000523540 ALDH16A1Q8IZ83 802 aa8.66□□□□□ -1.02
PCM1-219ENST00000523540 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
PCM1-219ENST00000523540 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
PCM1-219ENST00000523540 TNP2Q05952 138 aa8.65□□□□□ -1.02
PCM1-219ENST00000523540 B4GALNT3Q6L9W6 998 aa8.65□□□□□ -1.02
PCM1-219ENST00000523540 RHPN1Q8TCX5 695 aa8.65□□□□□ -1.02
PCM1-219ENST00000523540 HCN4Q9Y3Q4 1203 aa8.65□□□□□ -1.02
PCM1-219ENST00000523540 ATXN7O15265 892 aaPredicted RBP8.64□□□□□ -1.03
PCM1-219ENST00000523540 EFSO43281 561 aa8.64□□□□□ -1.03
PCM1-219ENST00000523540 MAPTP10636 758 aaKnown RBP8.64□□□□□ -1.03
PCM1-219ENST00000523540 GATA4P43694 442 aa8.64□□□□□ -1.03
PCM1-219ENST00000523540 ARSJQ5FYB0 599 aaPredicted RBP8.64□□□□□ -1.03
PCM1-219ENST00000523540 ZMYM1Q5SVZ6 1142 aa8.64□□□□□ -1.03
PCM1-219ENST00000523540 C11orf16Q9NQ32 467 aa8.64□□□□□ -1.03
PCM1-219ENST00000523540 KCNQ4P56696 695 aa8.63□□□□□ -1.03
PCM1-219ENST00000523540 RSPO4Q2I0M5 234 aaPredicted RBP8.63□□□□□ -1.03
PCM1-219ENST00000523540 BICDL1Q6ZP65 573 aa8.63□□□□□ -1.03
PCM1-219ENST00000523540 MKNK1Q9BUB5 465 aa8.63□□□□□ -1.03
PCM1-219ENST00000523540 TGFBR3LH3BV60 316 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 SPATA31C1P0DKV0 1188 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 FOXD4L6Q3SYB3 417 aaPredicted RBP8.62□□□□□ -1.03
PCM1-219ENST00000523540 NKAPLQ5M9Q1 402 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 FOXD4L3Q6VB84 417 aaPredicted RBP8.62□□□□□ -1.03
PCM1-219ENST00000523540 TXNDC2Q86VQ3 553 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 KRTAP1-3Q8IUG1 177 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 MDFIQ99750 246 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
PCM1-219ENST00000523540 EFCC1Q9HA90 598 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 SEPT3Q9UH03 358 aa8.62□□□□□ -1.03
PCM1-219ENST00000523540 CD33P20138 364 aa8.61□□□□□ -1.03
PCM1-219ENST00000523540 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
PCM1-219ENST00000523540 GJA3Q9Y6H8 435 aa8.61□□□□□ -1.03
PCM1-219ENST00000523540 DCDC2BA2VCK2 349 aa8.6□□□□□ -1.03
PCM1-219ENST00000523540 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
PCM1-219ENST00000523540 NAA30Q147X3 362 aaPredicted RBP8.6□□□□□ -1.03
PCM1-219ENST00000523540 ZNF468Q5VIY5 522 aaPredicted RBP8.6□□□□□ -1.03
PCM1-219ENST00000523540 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
PCM1-219ENST00000523540 SUSD3Q96L08 255 aa8.6□□□□□ -1.03
PCM1-219ENST00000523540 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
PCM1-219ENST00000523540 KCNA1Q09470 495 aa8.59□□□□□ -1.03
PCM1-219ENST00000523540 COX20Q5RI15 118 aa8.59□□□□□ -1.03
PCM1-219ENST00000523540 NEUROD4Q9HD90 331 aa8.59□□□□□ -1.03
PCM1-219ENST00000523540 LRFN2Q9ULH4 789 aa8.59□□□□□ -1.03
PCM1-219ENST00000523540 TYRO3Q06418 890 aa8.58□□□□□ -1.04
PCM1-219ENST00000523540 C11orf91Q3C1V1 193 aa8.58□□□□□ -1.04
PCM1-219ENST00000523540 C16orf46Q6P387 395 aa8.58□□□□□ -1.04
PCM1-219ENST00000523540 KRTAP4-12Q9BQ66 201 aa8.58□□□□□ -1.04
PCM1-219ENST00000523540 MTMR7Q9Y216 660 aa8.58□□□□□ -1.04
PCM1-219ENST00000523540 GNEQ9Y223 722 aaKnown RBP8.58□□□□□ -1.04
PCM1-219ENST00000523540 KHNYNO15037 678 aaKnown RBP8.57□□□□□ -1.04
PCM1-219ENST00000523540 PCBP4P57723 403 aaKnown RBP8.57□□□□□ -1.04
PCM1-219ENST00000523540 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
PCM1-219ENST00000523540 GTF3C2Q8WUA4 911 aaPredicted RBP8.57□□□□□ -1.04
PCM1-219ENST00000523540 DMGDHQ9UI17 866 aaKnown RBP8.57□□□□□ -1.04
PCM1-219ENST00000523540 BTLAQ7Z6A9 289 aa8.56□□□□□ -1.04
PCM1-219ENST00000523540 STRN4Q9NRL3 753 aa8.56□□□□□ -1.04
PCM1-219ENST00000523540 TPSG1Q9NRR2 321 aa8.56□□□□□ -1.04
PCM1-219ENST00000523540 ELOA3CA0A087WX78 387 aaPredicted RBP8.55□□□□□ -1.04
PCM1-219ENST00000523540 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
PCM1-219ENST00000523540 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 DYRK3O43781 588 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 EPB42P16452 691 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 SERPINB4P48594 390 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
PCM1-219ENST00000523540 ELOA3BQ3SY89 546 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 LRRC69Q6ZNQ3 347 aa8.55□□□□□ -1.04
PCM1-219ENST00000523540 ELOA3Q8NG57 546 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms