RNA–Protein interactions for RNA: ENST00000523460.5

ARFGAP1-218, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-218ENST00000523460 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
ARFGAP1-218ENST00000523460 PCNTO95613 3336 aa18.51■□□□□ 0.55
ARFGAP1-218ENST00000523460 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 LTBP1Q14766 1721 aa18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 IARSP41252 1262 aaKnown RBP18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 ZNF428Q96B54 188 aa18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 L3MBTL3Q96JM7 780 aaPredicted RBP18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 SCN4AP35499 1836 aa18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 ADAMTSL1Q8N6G6 1762 aa18.5■□□□□ 0.55
ARFGAP1-218ENST00000523460 TCERG1O14776 1098 aaKnown RBP18.49■□□□□ 0.55
ARFGAP1-218ENST00000523460 ALDH1B1P30837 517 aa18.49■□□□□ 0.55
ARFGAP1-218ENST00000523460 CHADLQ6NUI6 762 aa18.49■□□□□ 0.55
ARFGAP1-218ENST00000523460 HOXA10P31260 410 aaPredicted RBP18.48■□□□□ 0.55
ARFGAP1-218ENST00000523460 RTKN2Q8IZC4 609 aa18.48■□□□□ 0.55
ARFGAP1-218ENST00000523460 TAF1DQ9H5J8 278 aaPredicted RBP18.48■□□□□ 0.55
ARFGAP1-218ENST00000523460 RNF123Q5XPI4 1314 aa18.48■□□□□ 0.55
ARFGAP1-218ENST00000523460 XAGE3Q8WTP9 111 aa18.47■□□□□ 0.55
ARFGAP1-218ENST00000523460 RPGRQ92834 1020 aaKnown RBP18.47■□□□□ 0.55
ARFGAP1-218ENST00000523460 FZD9O00144 591 aa18.46■□□□□ 0.55
ARFGAP1-218ENST00000523460 AIMP1Q12904 312 aaKnown RBP18.46■□□□□ 0.55
ARFGAP1-218ENST00000523460 COL13A1Q5TAT6 717 aaPredicted RBP18.46■□□□□ 0.55
ARFGAP1-218ENST00000523460 COPS6Q7L5N1 327 aa18.46■□□□□ 0.55
ARFGAP1-218ENST00000523460 COL4A1P02462 1669 aa18.45■□□□□ 0.54
ARFGAP1-218ENST00000523460 PPEF1O14829 653 aaPredicted RBP18.45■□□□□ 0.54
ARFGAP1-218ENST00000523460 PSMD1Q99460 953 aa18.45■□□□□ 0.54
ARFGAP1-218ENST00000523460 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
ARFGAP1-218ENST00000523460 LAS1LQ9Y4W2 734 aaKnown RBP18.45■□□□□ 0.54
ARFGAP1-218ENST00000523460 TAF1P21675 1872 aa18.45■□□□□ 0.54
ARFGAP1-218ENST00000523460 CHL1O00533 1208 aa18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 LMOD3Q0VAK6 560 aa18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 EAPPQ56P03 285 aaPredicted RBP18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 ABCC4O15439 1325 aa18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 PASKQ96RG2 1323 aa18.44■□□□□ 0.54
ARFGAP1-218ENST00000523460 IQCA1LA6NCM1 817 aa18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 HCLS1P14317 486 aaPredicted RBP18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 PARP10Q53GL7 1025 aa18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 NLRP10Q86W26 655 aa18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 LDHDQ86WU2 507 aa18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 RBM17Q96I25 401 aaKnown RBP18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 CRAMP1Q96RY5 1269 aa18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 MKRN1Q9UHC7 482 aaKnown RBP18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
ARFGAP1-218ENST00000523460 HSPA1AP0DMV8 641 aaKnown RBP18.42■□□□□ 0.54
ARFGAP1-218ENST00000523460 HSPA1BP0DMV9 641 aaKnown RBP18.42■□□□□ 0.54
ARFGAP1-218ENST00000523460 EPHX2P34913 555 aa18.42■□□□□ 0.54
ARFGAP1-218ENST00000523460 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.546e-7■■■□□ 17.1
ARFGAP1-218ENST00000523460 PPP1R42Q7Z4L9 355 aa18.42■□□□□ 0.54
ARFGAP1-218ENST00000523460 HACL1Q9UJ83 578 aa18.42■□□□□ 0.54
ARFGAP1-218ENST00000523460 ITGBL1O95965 494 aaPredicted RBP18.41■□□□□ 0.54
ARFGAP1-218ENST00000523460 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
ARFGAP1-218ENST00000523460 GJA3Q9Y6H8 435 aa18.41■□□□□ 0.54
ARFGAP1-218ENST00000523460 SLC10A5Q5PT55 438 aa18.4■□□□□ 0.54
ARFGAP1-218ENST00000523460 MAP1SQ66K74 1059 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-218ENST00000523460 PRKRIP1Q9H875 184 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-218ENST00000523460 CREBZFQ9NS37 354 aa18.4■□□□□ 0.54
ARFGAP1-218ENST00000523460 DUOX1Q9NRD9 1551 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 SCNN1DP51172 638 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 TCIRG1Q13488 830 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 AOC3Q16853 763 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 CC2D2BQ6DHV5 1058 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 GPC2Q8N158 579 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 LARGE2Q8N3Y3 721 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 NLRP3Q96P20 1036 aa18.39■□□□□ 0.53
ARFGAP1-218ENST00000523460 FMR1Q06787 632 aaKnown RBP eCLIP18.38■□□□□ 0.53
ARFGAP1-218ENST00000523460 HDGFL1Q5TGJ6 251 aa18.38■□□□□ 0.53
ARFGAP1-218ENST00000523460 JDP2Q8WYK2 163 aa18.38■□□□□ 0.53
ARFGAP1-218ENST00000523460 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
ARFGAP1-218ENST00000523460 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
ARFGAP1-218ENST00000523460 ATP6V0A2Q9Y487 856 aa18.38■□□□□ 0.53
ARFGAP1-218ENST00000523460 PPIP5K2O43314 1243 aa18.37■□□□□ 0.53
ARFGAP1-218ENST00000523460 EPS15P42566 896 aa18.37■□□□□ 0.53
ARFGAP1-218ENST00000523460 TRMT112Q9UI30 125 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-218ENST00000523460 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
ARFGAP1-218ENST00000523460 LRRC37AA6NMS7 1700 aa18.37■□□□□ 0.53
ARFGAP1-218ENST00000523460 ATP5J2-PTCD1G3V325 749 aa18.36■□□□□ 0.53
ARFGAP1-218ENST00000523460 EIF6P56537 245 aaKnown RBP18.36■□□□□ 0.53
ARFGAP1-218ENST00000523460 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
ARFGAP1-218ENST00000523460 APAF1O14727 1248 aa18.35■□□□□ 0.53
ARFGAP1-218ENST00000523460 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
ARFGAP1-218ENST00000523460 NIM1KQ8IY84 436 aa18.35■□□□□ 0.53
ARFGAP1-218ENST00000523460 SH3TC1Q8TE82 1336 aa18.34■□□□□ 0.53
ARFGAP1-218ENST00000523460 ZNF853P0CG23 659 aa18.34■□□□□ 0.53
ARFGAP1-218ENST00000523460 CCDC184Q52MB2 194 aa18.34■□□□□ 0.53
ARFGAP1-218ENST00000523460 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
ARFGAP1-218ENST00000523460 PLBD2Q8NHP8 589 aa18.34■□□□□ 0.53
ARFGAP1-218ENST00000523460 CFAP44Q96MT7 982 aa18.34■□□□□ 0.53
ARFGAP1-218ENST00000523460 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
ARFGAP1-218ENST00000523460 RTL5Q5HYW3 569 aaPredicted RBP18.33■□□□□ 0.52
ARFGAP1-218ENST00000523460 FAM89AQ96GI7 184 aa18.33■□□□□ 0.52
ARFGAP1-218ENST00000523460 RTFDC1Q9BY42 306 aaPredicted RBP18.33■□□□□ 0.52
ARFGAP1-218ENST00000523460 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
ARFGAP1-218ENST00000523460 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
ARFGAP1-218ENST00000523460 HOXB7P09629 217 aa18.32■□□□□ 0.52
ARFGAP1-218ENST00000523460 VEGFBP49765 207 aa18.32■□□□□ 0.52
ARFGAP1-218ENST00000523460 CXCL9Q07325 125 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms