RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 HOXB7P09629 217 aa15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 CCDC152Q4G0S7 254 aa15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 RBM8AQ9Y5S9 174 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 SYCE3A1L190 88 aa15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 SMARCC1Q92922 1105 aaPredicted RBP15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 TMX3Q96JJ7 454 aa15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 HMGB1P09429 215 aaKnown RBP15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 NEK1Q96PY6 1258 aa15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
PCDHGB1-201ENST00000523390 PNMA6EA0A0J9YXQ4 647 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 SPC24Q8NBT2 197 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 ARHGAP31Q2M1Z3 1444 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 NUP62CLQ9H1M0 184 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 IFIT3O14879 490 aaKnown RBP15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 SMC2O95347 1197 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 TXLNAP40222 546 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 TFCP2Q12800 502 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 MKNK2Q9HBH9 465 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 NECAB1Q8N987 351 aa15.36■□□□□ 0.05
PCDHGB1-201ENST00000523390 PDILTQ8N807 584 aa15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 IRS4O14654 1257 aaPredicted RBP15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 TTF1Q15361 905 aaPredicted RBP15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 LRRIQ1Q96JM4 1722 aa15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 C8orf76Q96K31 380 aa15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 NMIQ13287 307 aaPredicted RBP15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 SOGA3Q5TF21 947 aa15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 UNC13BO14795 1591 aa15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 ATP7BP35670 1465 aa15.35■□□□□ 0.05
PCDHGB1-201ENST00000523390 GJB2P29033 226 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 BRF1Q92994 677 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 USP6P35125 1406 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 AATKQ6ZMQ8 1374 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 CLASP1Q7Z460 1538 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 ZNF521Q96K83 1311 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 CAMK4Q16566 473 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 ANKRD18AQ8IVF6 992 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
PCDHGB1-201ENST00000523390 UQCRFS1P1P0C7P4 283 aa15.33■□□□□ 0.05
PCDHGB1-201ENST00000523390 CCDC144CPQ8IYA2 1237 aa15.33■□□□□ 0.05
PCDHGB1-201ENST00000523390 CDK5RAP3Q96JB5 506 aa15.33■□□□□ 0.05
PCDHGB1-201ENST00000523390 NOL7Q9UMY1 257 aaKnown RBP15.33■□□□□ 0.05
PCDHGB1-201ENST00000523390 TTC41PQ6P2S7 1318 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 SLC4A8Q2Y0W8 1093 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 RNF17Q9BXT8 1623 aaKnown RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 MAP3K4Q9Y6R4 1608 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 CHMLP26374 656 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 MICU3Q86XE3 530 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 TRMT2AQ8IZ69 625 aaKnown RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 NLRP3Q96P20 1036 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 UTP14AQ9BVJ6 771 aaKnown RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 HMG20BQ9P0W2 317 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 SLC12A7Q9Y666 1083 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 KIAA0232Q92628 1395 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 NPHP4O75161 1426 aaPredicted RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 STX6O43752 255 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 IQCA1Q86XH1 822 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 NOC3LQ8WTT2 800 aaKnown RBP15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 USP16Q9Y5T5 823 aa15.33■□□□□ 0.04
PCDHGB1-201ENST00000523390 A2ML1A8K2U0 1454 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 BCORL1Q5H9F3 1711 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 TIMM10P62072 90 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 HMGN5P82970 282 aaKnown RBP15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 CCDC173Q0VFZ6 552 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 WASF1Q92558 559 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 GOLGA8AA7E2F4 631 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 BRPF1P55201 1214 aaPredicted RBP15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 SLC9C2Q5TAH2 1124 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 PAG1Q9NWQ8 432 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 FAM13BQ9NYF5 915 aa15.32■□□□□ 0.04
PCDHGB1-201ENST00000523390 SUCLG2Q96I99 432 aa15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 RNF41Q9H4P4 317 aaPredicted RBP15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 GIGYF1O75420 1035 aaPredicted RBP15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 SCAND2PQ9GZW5 306 aaPredicted RBP15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 TRPM1Q7Z4N2 1603 aa15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 ARHGEF25Q86VW2 580 aa15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 CTCFLQ8NI51 663 aaPredicted RBP15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 CROCC2H7BZ55 1655 aa15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 MPHOSPH10O00566 681 aaKnown RBP15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
PCDHGB1-201ENST00000523390 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 ANAPC15P60006 121 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 MAP3K11Q16584 847 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 ABCC4O15439 1325 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 CCDC196A0A1B0GTZ2 297 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 ZFYP08048 801 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms