RNA–Protein interactions for RNA: ENST00000523344.5

CDK16-220, Transcript of cyclin dependent kinase 16, humanhuman

TSL 5

Gene CDK16, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-220ENST00000523344 TNS4Q8IZW8 715 aa15.4■□□□□ 0.06
CDK16-220ENST00000523344 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
CDK16-220ENST00000523344 ZNF277Q9NRM2 450 aaPredicted RBP15.4■□□□□ 0.06
CDK16-220ENST00000523344 ZNF541Q9H0D2 1346 aa15.4■□□□□ 0.06
CDK16-220ENST00000523344 TMEM88BA6NKF7 163 aa15.39■□□□□ 0.05
CDK16-220ENST00000523344 EPHX2P34913 555 aa15.39■□□□□ 0.05
CDK16-220ENST00000523344 RALBP1Q15311 655 aa15.39■□□□□ 0.05
CDK16-220ENST00000523344 SYNE4Q8N205 404 aa15.39■□□□□ 0.05
CDK16-220ENST00000523344 UBN2Q6ZU65 1347 aa15.39■□□□□ 0.05
CDK16-220ENST00000523344 NTSR2O95665 410 aa15.38■□□□□ 0.05
CDK16-220ENST00000523344 ITGBL1O95965 494 aaPredicted RBP15.38■□□□□ 0.05
CDK16-220ENST00000523344 HSP90AB3PQ58FF7 597 aa15.38■□□□□ 0.05
CDK16-220ENST00000523344 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
CDK16-220ENST00000523344 LRRC37AA6NMS7 1700 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 EIF6P56537 245 aaKnown RBP15.37■□□□□ 0.05
CDK16-220ENST00000523344 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 MIS18AQ9NYP9 233 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 CDHR2Q9BYE9 1310 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 LTBP1Q14766 1721 aa15.37■□□□□ 0.05
CDK16-220ENST00000523344 COL4A5P29400 1685 aa15.36■□□□□ 0.05
CDK16-220ENST00000523344 RASSF10A6NK89 507 aa15.36■□□□□ 0.05
CDK16-220ENST00000523344 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
CDK16-220ENST00000523344 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
CDK16-220ENST00000523344 RRP7AQ9Y3A4 280 aaKnown RBP15.36■□□□□ 0.05
CDK16-220ENST00000523344 LMOD1P29536 600 aaPredicted RBP15.35■□□□□ 0.05
CDK16-220ENST00000523344 TMC4Q7Z404 712 aa15.35■□□□□ 0.05
CDK16-220ENST00000523344 NUTM1Q86Y26 1132 aa15.35■□□□□ 0.05
CDK16-220ENST00000523344 SUPT20HQ8NEM7 779 aa15.35■□□□□ 0.05
CDK16-220ENST00000523344 NLRP3Q96P20 1036 aa15.35■□□□□ 0.05
CDK16-220ENST00000523344 DDX60Q8IY21 1712 aaKnown RBP15.34■□□□□ 0.05
CDK16-220ENST00000523344 FAM177BA6PVY3 158 aa15.34■□□□□ 0.05
CDK16-220ENST00000523344 PPEF1O14829 653 aaPredicted RBP15.34■□□□□ 0.05
CDK16-220ENST00000523344 HOXB7P09629 217 aa15.34■□□□□ 0.05
CDK16-220ENST00000523344 SUSD4Q5VX71 490 aa15.34■□□□□ 0.05
CDK16-220ENST00000523344 USP50Q70EL3 339 aaPredicted RBP15.34■□□□□ 0.05
CDK16-220ENST00000523344 RTFDC1Q9BY42 306 aaPredicted RBP15.34■□□□□ 0.05
CDK16-220ENST00000523344 ZBTB3Q9H5J0 574 aa15.34■□□□□ 0.05
CDK16-220ENST00000523344 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
CDK16-220ENST00000523344 MYL6BP14649 208 aa15.33■□□□□ 0.04
CDK16-220ENST00000523344 PDIA6Q15084 440 aa15.33■□□□□ 0.04
CDK16-220ENST00000523344 EAPPQ56P03 285 aaPredicted RBP15.33■□□□□ 0.04
CDK16-220ENST00000523344 OLFM4Q6UX06 510 aa15.33■□□□□ 0.04
CDK16-220ENST00000523344 CNTROBQ8N137 903 aa15.33■□□□□ 0.04
CDK16-220ENST00000523344 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.04
CDK16-220ENST00000523344 AIDAQ96BJ3 306 aa15.33■□□□□ 0.04
CDK16-220ENST00000523344 UTP14AQ9BVJ6 771 aaKnown RBP15.33■□□□□ 0.04
CDK16-220ENST00000523344 ATP6V0A2Q9Y487 856 aa15.33■□□□□ 0.04
CDK16-220ENST00000523344 BBOX1O75936 387 aa15.32■□□□□ 0.04
CDK16-220ENST00000523344 GPTP24298 496 aa15.32■□□□□ 0.04
CDK16-220ENST00000523344 CTCFP49711 727 aaPredicted RBP15.32■□□□□ 0.04
CDK16-220ENST00000523344 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
CDK16-220ENST00000523344 THUMPD2Q9BTF0 503 aaKnown RBP15.32■□□□□ 0.04
CDK16-220ENST00000523344 TMPOP42166 694 aaKnown RBP15.31■□□□□ 0.04
CDK16-220ENST00000523344 SCNN1DP51172 638 aa15.31■□□□□ 0.04
CDK16-220ENST00000523344 RIPK4P57078 832 aa15.31■□□□□ 0.04
CDK16-220ENST00000523344 NGEFQ8N5V2 710 aa15.31■□□□□ 0.04
CDK16-220ENST00000523344 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
CDK16-220ENST00000523344 VEGFBP49765 207 aa15.3■□□□□ 0.04
CDK16-220ENST00000523344 MAP2K1Q02750 393 aaPredicted RBP15.3■□□□□ 0.04
CDK16-220ENST00000523344 DDX21Q9NR30 783 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDK16-220ENST00000523344 WBP1LQ9NX94 342 aa15.3■□□□□ 0.04
CDK16-220ENST00000523344 ABCC4O15439 1325 aa15.29■□□□□ 0.04
CDK16-220ENST00000523344 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
CDK16-220ENST00000523344 DEFB115Q30KQ5 88 aa15.29■□□□□ 0.04
CDK16-220ENST00000523344 SP8Q8IXZ3 490 aa15.29■□□□□ 0.04
CDK16-220ENST00000523344 ADARB2Q9NS39 739 aaKnown RBP15.29■□□□□ 0.04
CDK16-220ENST00000523344 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 CHL1O00533 1208 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 FOXN1O15353 648 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 PPIP5K2O43314 1243 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 ECE1P42892 770 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 MAP1SQ66K74 1059 aaPredicted RBP15.28■□□□□ 0.04
CDK16-220ENST00000523344 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 ZC3H15Q8WU90 426 aaKnown RBP15.28■□□□□ 0.04
CDK16-220ENST00000523344 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
CDK16-220ENST00000523344 KIAA2012Q0VF49 1180 aa15.27■□□□□ 0.04
CDK16-220ENST00000523344 HHIPL1Q96JK4 782 aa15.27■□□□□ 0.04
CDK16-220ENST00000523344 GPRC5DQ9NZD1 345 aa15.27■□□□□ 0.04
CDK16-220ENST00000523344 GJA3Q9Y6H8 435 aa15.27■□□□□ 0.04
CDK16-220ENST00000523344 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
CDK16-220ENST00000523344 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
CDK16-220ENST00000523344 GRAPQ13588 217 aa15.26■□□□□ 0.03
CDK16-220ENST00000523344 PROSER3Q2NL68 480 aa15.26■□□□□ 0.03
CDK16-220ENST00000523344 DPP8Q6V1X1 898 aaPredicted RBP15.26■□□□□ 0.03
CDK16-220ENST00000523344 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
CDK16-220ENST00000523344 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
CDK16-220ENST00000523344 COPS6Q7L5N1 327 aa15.26■□□□□ 0.03
CDK16-220ENST00000523344 GRAPLQ8TC17 118 aaPredicted RBP15.26■□□□□ 0.03
CDK16-220ENST00000523344 PGAP2Q9UHJ9 254 aa15.26■□□□□ 0.03
CDK16-220ENST00000523344 PSME4Q14997 1843 aa15.26■□□□□ 0.03
CDK16-220ENST00000523344 TAF1P21675 1872 aa15.25■□□□□ 0.03
CDK16-220ENST00000523344 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
CDK16-220ENST00000523344 TNIP1Q15025 636 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms