RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 MAP1SQ66K74 1059 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC9-213ENST00000522504 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
TRAPPC9-213ENST00000522504 NYXQ9GZU5 481 aa20.25■□□□□ 0.83
TRAPPC9-213ENST00000522504 CLEC11AQ9Y240 323 aa20.25■□□□□ 0.83
TRAPPC9-213ENST00000522504 GPC2Q8N158 579 aa20.24■□□□□ 0.83
TRAPPC9-213ENST00000522504 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
TRAPPC9-213ENST00000522504 ZNF34Q8IZ26 560 aa20.23■□□□□ 0.83
TRAPPC9-213ENST00000522504 CNTROBQ8N137 903 aa20.23■□□□□ 0.83
TRAPPC9-213ENST00000522504 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
TRAPPC9-213ENST00000522504 NTSR2O95665 410 aa20.22■□□□□ 0.83
TRAPPC9-213ENST00000522504 LRP10Q7Z4F1 713 aa20.22■□□□□ 0.83
TRAPPC9-213ENST00000522504 RPGRQ92834 1020 aaKnown RBP20.22■□□□□ 0.83
TRAPPC9-213ENST00000522504 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
TRAPPC9-213ENST00000522504 NUP98P52948 1817 aa20.22■□□□□ 0.83
TRAPPC9-213ENST00000522504 RIC1Q4ADV7 1423 aa20.21■□□□□ 0.83
TRAPPC9-213ENST00000522504 TCERG1O14776 1098 aaKnown RBP20.21■□□□□ 0.83
TRAPPC9-213ENST00000522504 PNMA8AQ86V59 439 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC9-213ENST00000522504 JDP2Q8WYK2 163 aa20.21■□□□□ 0.83
TRAPPC9-213ENST00000522504 LTBP1Q14766 1721 aa20.21■□□□□ 0.83
TRAPPC9-213ENST00000522504 IBTKQ9P2D0 1353 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC9-213ENST00000522504 SCNN1DP51172 638 aa20.2■□□□□ 0.82
TRAPPC9-213ENST00000522504 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.82
TRAPPC9-213ENST00000522504 PDIA6Q15084 440 aa20.2■□□□□ 0.82
TRAPPC9-213ENST00000522504 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
TRAPPC9-213ENST00000522504 RASSF10A6NK89 507 aa20.19■□□□□ 0.82
TRAPPC9-213ENST00000522504 NEFMP07197 916 aa20.19■□□□□ 0.82
TRAPPC9-213ENST00000522504 EPS15P42566 896 aa20.19■□□□□ 0.82
TRAPPC9-213ENST00000522504 PROSER3Q2NL68 480 aa20.19■□□□□ 0.82
TRAPPC9-213ENST00000522504 GIGYF2Q6Y7W6 1299 aaKnown RBP20.19■□□□□ 0.82
TRAPPC9-213ENST00000522504 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
TRAPPC9-213ENST00000522504 WBP1LQ9NX94 342 aa20.19■□□□□ 0.82
TRAPPC9-213ENST00000522504 PPEF1O14829 653 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC9-213ENST00000522504 EIF6P56537 245 aaKnown RBP20.18■□□□□ 0.82
TRAPPC9-213ENST00000522504 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
TRAPPC9-213ENST00000522504 ANXA1P04083 346 aa20.17■□□□□ 0.82
TRAPPC9-213ENST00000522504 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
TRAPPC9-213ENST00000522504 PRDM10Q9NQV6 1147 aa20.17■□□□□ 0.82
TRAPPC9-213ENST00000522504 CTCFP49711 727 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC9-213ENST00000522504 DEFB115Q30KQ5 88 aa20.16■□□□□ 0.82
TRAPPC9-213ENST00000522504 DDX21Q9NR30 783 aaKnown RBP eCLIP20.16■□□□□ 0.82
TRAPPC9-213ENST00000522504 TSPYL4Q9UJ04 414 aa20.16■□□□□ 0.82
TRAPPC9-213ENST00000522504 EIF2S2P20042 333 aaKnown RBP20.15■□□□□ 0.82
TRAPPC9-213ENST00000522504 AIDAQ96BJ3 306 aa20.15■□□□□ 0.82
TRAPPC9-213ENST00000522504 ERBB4Q15303 1308 aa20.15■□□□□ 0.82
TRAPPC9-213ENST00000522504 WDR33Q9C0J8 1336 aaKnown RBP20.14■□□□□ 0.81
TRAPPC9-213ENST00000522504 MAPK8IP3Q9UPT6 1336 aa20.14■□□□□ 0.81
TRAPPC9-213ENST00000522504 LBX1P52954 281 aa20.14■□□□□ 0.81
TRAPPC9-213ENST00000522504 SLC10A5Q5PT55 438 aa20.14■□□□□ 0.81
TRAPPC9-213ENST00000522504 ABCC4O15439 1325 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 TRAF5O00463 557 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 LMOD1P29536 600 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 AOC3Q16853 763 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 GRIPAP1Q4V328 841 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 PARP10Q53GL7 1025 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 PPP1R42Q7Z4L9 355 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 NLRP3Q96P20 1036 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 UTP14AQ9BVJ6 771 aaKnown RBP20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 ABT1Q9ULW3 272 aaKnown RBP20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 ATP6V0A2Q9Y487 856 aa20.13■□□□□ 0.81
TRAPPC9-213ENST00000522504 PPIP5K2O43314 1243 aa20.12■□□□□ 0.81
TRAPPC9-213ENST00000522504 RIPK4P57078 832 aa20.12■□□□□ 0.81
TRAPPC9-213ENST00000522504 CST9Q5W186 159 aa20.12■□□□□ 0.81
TRAPPC9-213ENST00000522504 NIM1KQ8IY84 436 aa20.12■□□□□ 0.81
TRAPPC9-213ENST00000522504 HSPA8P11142 646 aaKnown RBP20.11■□□□□ 0.81
TRAPPC9-213ENST00000522504 NECTIN2Q92692 538 aa20.11■□□□□ 0.81
TRAPPC9-213ENST00000522504 HCLS1P14317 486 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC9-213ENST00000522504 CXCL9Q07325 125 aa20.1■□□□□ 0.81
TRAPPC9-213ENST00000522504 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC9-213ENST00000522504 RTFDC1Q9BY42 306 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC9-213ENST00000522504 KRT24Q2M2I5 525 aa20.09■□□□□ 0.81
TRAPPC9-213ENST00000522504 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
TRAPPC9-213ENST00000522504 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
TRAPPC9-213ENST00000522504 XAGE3Q8WTP9 111 aa20.09■□□□□ 0.81
TRAPPC9-213ENST00000522504 ZNF428Q96B54 188 aa20.09■□□□□ 0.81
TRAPPC9-213ENST00000522504 PNNQ9H307 717 aaKnown RBP20.09■□□□□ 0.81
TRAPPC9-213ENST00000522504 GPRC5DQ9NZD1 345 aa20.09■□□□□ 0.81
TRAPPC9-213ENST00000522504 TMPOP42166 694 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-213ENST00000522504 AIMP1Q12904 312 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-213ENST00000522504 ZNRF3Q9ULT6 936 aa20.08■□□□□ 0.81
TRAPPC9-213ENST00000522504 GMPSP49915 693 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-213ENST00000522504 CYP4F22Q6NT55 531 aa20.07■□□□□ 0.8
TRAPPC9-213ENST00000522504 CAPNS2Q96L46 248 aa20.07■□□□□ 0.8
TRAPPC9-213ENST00000522504 MAP2K1Q02750 393 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-213ENST00000522504 DPP8Q6V1X1 898 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-213ENST00000522504 SP8Q8IXZ3 490 aa20.06■□□□□ 0.8
TRAPPC9-213ENST00000522504 VPS33BQ9H267 617 aa20.06■□□□□ 0.8
TRAPPC9-213ENST00000522504 ADARB2Q9NS39 739 aaKnown RBP20.06■□□□□ 0.8
TRAPPC9-213ENST00000522504 BABAM1Q9NWV8 329 aa20.06■□□□□ 0.8
TRAPPC9-213ENST00000522504 BBOX1O75936 387 aa20.05■□□□□ 0.8
TRAPPC9-213ENST00000522504 GRM1Q13255 1194 aa20.05■□□□□ 0.8
TRAPPC9-213ENST00000522504 TCIRG1Q13488 830 aa20.05■□□□□ 0.8
TRAPPC9-213ENST00000522504 SHTN1A0MZ66 631 aa20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 RAD17O75943 681 aa20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 MPNDQ8N594 471 aa20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC9-213ENST00000522504 TRMT112Q9UI30 125 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms