RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 ZNF280CQ8ND82 737 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 HPS1Q92902 700 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 KLRG1Q96E93 195 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 CRELD1Q96HD1 420 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 TGIF2Q9GZN2 237 aa7.82□□□□□ -1.16
CTNNA1-233ENST00000522052 UPP2O95045 317 aa7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 INPP5BP32019 993 aa7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 CTSOP43234 321 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 ARSDP51689 593 aa7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 WDR44Q5JSH3 913 aa7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 NBPF10Q6P3W6 841 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 UBXN4Q92575 508 aa7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 HSH2DQ96JZ2 352 aa7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 FNDC3AQ9Y2H6 1198 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-233ENST00000522052 TNFRSF21O75509 655 aa7.8□□□□□ -1.16
CTNNA1-233ENST00000522052 CTSHP09668 335 aa7.8□□□□□ -1.16
CTNNA1-233ENST00000522052 ATP4AP20648 1035 aa7.8□□□□□ -1.16
CTNNA1-233ENST00000522052 EIF4BP23588 611 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-233ENST00000522052 POU4F2Q12837 409 aa7.8□□□□□ -1.16
CTNNA1-233ENST00000522052 BICDL1Q6ZP65 573 aa7.8□□□□□ -1.16
CTNNA1-233ENST00000522052 GIPC1O14908 333 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 CAPN5O15484 640 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 PRR20EP86478 221 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 PRR20CP86479 221 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 PRR20DP86480 221 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 PRR20BP86481 221 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 PRR20AP86496 221 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 PDE12Q6L8Q7 609 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 BTLAQ7Z6A9 289 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 SNX29Q8TEQ0 813 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 CCDC74AQ96AQ1 378 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 ZIC5Q96T25 663 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 TINF2Q9BSI4 451 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 CCSER2Q9H7U1 834 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 NEUROD4Q9HD90 331 aa7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 FOXD3Q9UJU5 478 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 RTCBQ9Y3I0 505 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-233ENST00000522052 TRIP4Q15650 581 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-233ENST00000522052 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
CTNNA1-233ENST00000522052 ZNF438Q7Z4V0 828 aa7.78□□□□□ -1.16
CTNNA1-233ENST00000522052 RNF217Q8TC41 542 aa7.78□□□□□ -1.16
CTNNA1-233ENST00000522052 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
CTNNA1-233ENST00000522052 USP20Q9Y2K6 914 aa7.78□□□□□ -1.16
CTNNA1-233ENST00000522052 KCNMB2Q9Y691 235 aa7.78□□□□□ -1.16
CTNNA1-233ENST00000522052 A0A1B0GTH6 734 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 UBAP1LF5GYI3 381 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 BMP2P12643 396 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 USPL1Q5W0Q7 1092 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 LRRC69Q6ZNQ3 347 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 TRIM67Q6ZTA4 783 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 PRICKLE2Q7Z3G6 844 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 CMTR1Q8N1G2 835 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 SLC43A3Q8NBI5 491 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 C12orf49Q9H741 205 aa7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 PPP1R1BQ9UD71 204 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-233ENST00000522052 MSX1P28360 303 aa7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 ARSJQ5FYB0 599 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 EPS8L3Q8TE67 593 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 ELP3Q9H9T3 547 aa7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 NLRP2Q9NX02 1062 aa7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 PLA2G2EQ9NZK7 142 aa7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-233ENST00000522052 PHACTR2O75167 634 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 EPB42P16452 691 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 IRS1P35568 1242 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 PI16Q6UXB8 463 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 OSBPL7Q9BZF2 842 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 ACBD3Q9H3P7 528 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 CAPN10Q9HC96 672 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 TMEM63CQ9P1W3 806 aa7.75□□□□□ -1.17
CTNNA1-233ENST00000522052 USP31Q70CQ4 1352 aa7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 A0A1W2PNR3 127 aa7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 PTPN12Q05209 780 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 TYRO3Q06418 890 aa7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 C6orf118Q5T5N4 469 aa7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 MRPL14Q6P1L8 145 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 TANGO6Q9C0B7 1094 aa7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 FAM8A1Q9UBU6 413 aa7.74□□□□□ -1.17
CTNNA1-233ENST00000522052 GRNP28799 593 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-233ENST00000522052 GNL2Q13823 731 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-233ENST00000522052 SRCIN1Q9C0H9 1055 aa7.73□□□□□ -1.17
CTNNA1-233ENST00000522052 CHRDQ9H2X0 955 aa7.73□□□□□ -1.17
CTNNA1-233ENST00000522052 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
CTNNA1-233ENST00000522052 C11orf16Q9NQ32 467 aa7.73□□□□□ -1.17
CTNNA1-233ENST00000522052 DDX41Q9UJV9 622 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-233ENST00000522052 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 XYLBO75191 536 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 EGFRP00533 1210 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 RHOQP17081 205 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 TAF1CQ15572 869 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 ZNF394Q53GI3 561 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 HS2ST1Q7LGA3 356 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 GALNT12Q8IXK2 581 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 ZNF654Q8IZM8 581 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 CEP63Q96MT8 703 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 NPHS2Q9NP85 383 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 GJA3Q9Y6H8 435 aa7.72□□□□□ -1.17
CTNNA1-233ENST00000522052 POLR3DP05423 398 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms