RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 NBPF15Q8N660 670 aa15.25■□□□□ 0.03
MRPS28-206ENST00000520946 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
MRPS28-206ENST00000520946 RBM17Q96I25 401 aaKnown RBP15.25■□□□□ 0.03
MRPS28-206ENST00000520946 PSMD1Q99460 953 aa15.25■□□□□ 0.03
MRPS28-206ENST00000520946 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
MRPS28-206ENST00000520946 SIPA1L3O60292 1781 aaPredicted RBP15.24■□□□□ 0.03
MRPS28-206ENST00000520946 RASSF10A6NK89 507 aa15.24■□□□□ 0.03
MRPS28-206ENST00000520946 ECE1P42892 770 aa15.24■□□□□ 0.03
MRPS28-206ENST00000520946 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
MRPS28-206ENST00000520946 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
MRPS28-206ENST00000520946 MYL6BP14649 208 aa15.23■□□□□ 0.03
MRPS28-206ENST00000520946 NIM1KQ8IY84 436 aa15.23■□□□□ 0.03
MRPS28-206ENST00000520946 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
MRPS28-206ENST00000520946 ERVV-1B6SEH8 477 aa15.22■□□□□ 0.03
MRPS28-206ENST00000520946 GPTP24298 496 aa15.22■□□□□ 0.03
MRPS28-206ENST00000520946 PPEF1O14829 653 aaPredicted RBP15.21■□□□□ 0.03
MRPS28-206ENST00000520946 PPP2R1AP30153 589 aa15.21■□□□□ 0.03
MRPS28-206ENST00000520946 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
MRPS28-206ENST00000520946 ZBTB3Q9H5J0 574 aa15.21■□□□□ 0.03
MRPS28-206ENST00000520946 MAP3K15Q6ZN16 1313 aa15.2■□□□□ 0.02
MRPS28-206ENST00000520946 PPIP5K2O43314 1243 aa15.2■□□□□ 0.02
MRPS28-206ENST00000520946 HSPA8P11142 646 aaKnown RBP15.2■□□□□ 0.02
MRPS28-206ENST00000520946 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
MRPS28-206ENST00000520946 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
MRPS28-206ENST00000520946 GPR101Q96P66 508 aaPredicted RBP15.2■□□□□ 0.02
MRPS28-206ENST00000520946 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
MRPS28-206ENST00000520946 EPS15P42566 896 aa15.19■□□□□ 0.02
MRPS28-206ENST00000520946 ABHD8Q96I13 439 aa15.19■□□□□ 0.02
MRPS28-206ENST00000520946 CAPNS2Q96L46 248 aa15.19■□□□□ 0.02
MRPS28-206ENST00000520946 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
MRPS28-206ENST00000520946 CRAMP1Q96RY5 1269 aa15.19■□□□□ 0.02
MRPS28-206ENST00000520946 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
MRPS28-206ENST00000520946 SUSD4Q5VX71 490 aa15.18■□□□□ 0.02
MRPS28-206ENST00000520946 TTLL7Q6ZT98 887 aa15.18■□□□□ 0.02
MRPS28-206ENST00000520946 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
MRPS28-206ENST00000520946 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
MRPS28-206ENST00000520946 PCNTO95613 3336 aa15.18■□□□□ 0.02
MRPS28-206ENST00000520946 ABCC12Q96J65 1359 aa15.17■□□□□ 0.02
MRPS28-206ENST00000520946 HOXA10P31260 410 aaPredicted RBP15.17■□□□□ 0.02
MRPS28-206ENST00000520946 CYP4F22Q6NT55 531 aa15.17■□□□□ 0.02
MRPS28-206ENST00000520946 BCL2L13Q9BXK5 485 aa15.17■□□□□ 0.02
MRPS28-206ENST00000520946 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
MRPS28-206ENST00000520946 SCNN1DP51172 638 aa15.16■□□□□ 0.02
MRPS28-206ENST00000520946 AOC3Q16853 763 aa15.16■□□□□ 0.02
MRPS28-206ENST00000520946 PARP10Q53GL7 1025 aa15.16■□□□□ 0.02
MRPS28-206ENST00000520946 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
MRPS28-206ENST00000520946 ADARB2Q9NS39 739 aaKnown RBP15.16■□□□□ 0.02
MRPS28-206ENST00000520946 TRAF5O00463 557 aa15.15■□□□□ 0.02
MRPS28-206ENST00000520946 EIF2S2P20042 333 aaKnown RBP15.15■□□□□ 0.02
MRPS28-206ENST00000520946 EIF4A1P60842 406 aaKnown RBP15.15■□□□□ 0.02
MRPS28-206ENST00000520946 VPS33BQ9H267 617 aa15.15■□□□□ 0.02
MRPS28-206ENST00000520946 ZNF408Q9H9D4 720 aa15.15■□□□□ 0.02
MRPS28-206ENST00000520946 CELF2O95319 508 aaKnown RBP15.14■□□□□ 0.01
MRPS28-206ENST00000520946 FMR1Q06787 632 aaKnown RBP eCLIP15.14■□□□□ 0.01
MRPS28-206ENST00000520946 FAM161AQ3B820 660 aa15.14■□□□□ 0.01
MRPS28-206ENST00000520946 DPP8Q6V1X1 898 aaPredicted RBP15.14■□□□□ 0.01
MRPS28-206ENST00000520946 GIGYF2Q6Y7W6 1299 aaKnown RBP15.14■□□□□ 0.01
MRPS28-206ENST00000520946 ZNRF3Q9ULT6 936 aa15.14■□□□□ 0.01
MRPS28-206ENST00000520946 ATP6V0A2Q9Y487 856 aa15.14■□□□□ 0.01
MRPS28-206ENST00000520946 IBTKQ9P2D0 1353 aaPredicted RBP15.13■□□□□ 0.01
MRPS28-206ENST00000520946 MAP2K2P36507 400 aa15.13■□□□□ 0.01
MRPS28-206ENST00000520946 TNIP1Q15025 636 aa15.13■□□□□ 0.01
MRPS28-206ENST00000520946 ZNF34Q8IZ26 560 aa15.13■□□□□ 0.01
MRPS28-206ENST00000520946 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
MRPS28-206ENST00000520946 GPRC5DQ9NZD1 345 aa15.13■□□□□ 0.01
MRPS28-206ENST00000520946 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
MRPS28-206ENST00000520946 TLL2Q9Y6L7 1015 aa15.13■□□□□ 0.01
MRPS28-206ENST00000520946 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
MRPS28-206ENST00000520946 CA12O43570 354 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 BBOX1O75936 387 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 NTSR2O95665 410 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 MLLT1Q03111 559 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-206ENST00000520946 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 CST9Q5W186 159 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 CIAPIN1Q6FI81 312 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 DDX46Q7L014 1031 aaKnown RBP15.12■□□□□ 0.01
MRPS28-206ENST00000520946 MPNDQ8N594 471 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 ERBB4Q15303 1308 aa15.12■□□□□ 0.01
MRPS28-206ENST00000520946 ADAMTSL1Q8N6G6 1762 aa15.11■□□□□ 0.01
MRPS28-206ENST00000520946 H7C1D1 291 aa15.11■□□□□ 0.01
MRPS28-206ENST00000520946 AOC2O75106 756 aa15.11■□□□□ 0.01
MRPS28-206ENST00000520946 GMPSP49915 693 aaPredicted RBP15.11■□□□□ 0.01
MRPS28-206ENST00000520946 CXCL9Q07325 125 aa15.11■□□□□ 0.01
MRPS28-206ENST00000520946 HSP90AB3PQ58FF7 597 aa15.11■□□□□ 0.01
MRPS28-206ENST00000520946 NUP98P52948 1817 aa15.1■□□□□ 0.01
MRPS28-206ENST00000520946 RIC1Q4ADV7 1423 aa15.1■□□□□ 0.01
MRPS28-206ENST00000520946 RAD17O75943 681 aa15.1■□□□□ 0.01
MRPS28-206ENST00000520946 AIMP1Q12904 312 aaKnown RBP15.1■□□□□ 0.01
MRPS28-206ENST00000520946 SP8Q8IXZ3 490 aa15.1■□□□□ 0.01
MRPS28-206ENST00000520946 LAMB4A4D0S4 1761 aa15.09■□□□□ 0.01
MRPS28-206ENST00000520946 C3orf67Q6ZVT6 689 aa15.09■□□□□ 0.01
MRPS28-206ENST00000520946 CDC37L1Q7L3B6 337 aa15.09■□□□□ 0.01
MRPS28-206ENST00000520946 GLIS2Q9BZE0 524 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-206ENST00000520946 TRMT112Q9UI30 125 aaKnown RBP15.09■□□□□ 0.01
MRPS28-206ENST00000520946 ABCC4O15439 1325 aa15.09■□□□□ 0.01
MRPS28-206ENST00000520946 SLC10A5Q5PT55 438 aa15.08■□□□□ 0
MRPS28-206ENST00000520946 SAPCD2Q86UD0 394 aa15.08■□□□□ 0
MRPS28-206ENST00000520946 ZC3H15Q8WU90 426 aaKnown RBP15.08■□□□□ 0
MRPS28-206ENST00000520946 NECTIN2Q92692 538 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms