RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CHL1O00533 1208 aa25.72■■□□□ 1.71
PABPC1-215ENST00000520804 L3MBTL3Q96JM7 780 aaPredicted RBP25.72■■□□□ 1.71
PABPC1-215ENST00000520804 TRIM35Q9UPQ4 493 aa25.72■■□□□ 1.71
PABPC1-215ENST00000520804 IARSP41252 1262 aaKnown RBP25.71■■□□□ 1.71
PABPC1-215ENST00000520804 CC2D2BQ6DHV5 1058 aa25.71■■□□□ 1.71
PABPC1-215ENST00000520804 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
PABPC1-215ENST00000520804 SCN4AP35499 1836 aa25.7■■□□□ 1.71
PABPC1-215ENST00000520804 ZNF541Q9H0D2 1346 aa25.7■■□□□ 1.71
PABPC1-215ENST00000520804 IQCA1LA6NCM1 817 aa25.7■■□□□ 1.7
PABPC1-215ENST00000520804 CHADLQ6NUI6 762 aa25.7■■□□□ 1.7
PABPC1-215ENST00000520804 NECTIN2Q92692 538 aa25.7■■□□□ 1.7
PABPC1-215ENST00000520804 RBM17Q96I25 401 aaKnown RBP25.7■■□□□ 1.7
PABPC1-215ENST00000520804 PSMD1Q99460 953 aa25.7■■□□□ 1.7
PABPC1-215ENST00000520804 COPS6Q7L5N1 327 aa25.69■■□□□ 1.7
PABPC1-215ENST00000520804 CRAMP1Q96RY5 1269 aa25.69■■□□□ 1.7
PABPC1-215ENST00000520804 POTEIP0CG38 1075 aa25.68■■□□□ 1.7
PABPC1-215ENST00000520804 POTEJP0CG39 1038 aa25.68■■□□□ 1.7
PABPC1-215ENST00000520804 KRT24Q2M2I5 525 aa25.68■■□□□ 1.7
PABPC1-215ENST00000520804 SLC10A5Q5PT55 438 aa25.68■■□□□ 1.7
PABPC1-215ENST00000520804 C3orf67Q6ZVT6 689 aa25.68■■□□□ 1.7
PABPC1-215ENST00000520804 UTP14AQ9BVJ6 771 aaKnown RBP25.68■■□□□ 1.7
PABPC1-215ENST00000520804 DDX21Q9NR30 783 aaKnown RBP eCLIP25.68■■□□□ 1.7
PABPC1-215ENST00000520804 LAS1LQ9Y4W2 734 aaKnown RBP25.68■■□□□ 1.7
PABPC1-215ENST00000520804 ANKRD36CQ5JPF3 1778 aa25.67■■□□□ 1.7
PABPC1-215ENST00000520804 FZD9O00144 591 aa25.67■■□□□ 1.7
PABPC1-215ENST00000520804 HSP90AB3PQ58FF7 597 aa25.67■■□□□ 1.7
PABPC1-215ENST00000520804 XAGE3Q8WTP9 111 aa25.67■■□□□ 1.7
PABPC1-215ENST00000520804 NLRP3Q96P20 1036 aa25.67■■□□□ 1.7
PABPC1-215ENST00000520804 TAF1DQ9H5J8 278 aaPredicted RBP25.67■■□□□ 1.7
PABPC1-215ENST00000520804 PRKRIP1Q9H875 184 aaPredicted RBP25.67■■□□□ 1.7
PABPC1-215ENST00000520804 AIMP1Q12904 312 aaKnown RBP25.66■■□□□ 1.7
PABPC1-215ENST00000520804 GRIPAP1Q4V328 841 aa25.66■■□□□ 1.7
PABPC1-215ENST00000520804 RNF123Q5XPI4 1314 aa25.65■■□□□ 1.7
PABPC1-215ENST00000520804 PPEF1O14829 653 aaPredicted RBP25.65■■□□□ 1.7
PABPC1-215ENST00000520804 NLRP10Q86W26 655 aa25.64■■□□□ 1.7
PABPC1-215ENST00000520804 LDHDQ86WU2 507 aa25.64■■□□□ 1.7
PABPC1-215ENST00000520804 JDP2Q8WYK2 163 aa25.64■■□□□ 1.7
PABPC1-215ENST00000520804 TCIRG1Q13488 830 aa25.63■■□□□ 1.69
PABPC1-215ENST00000520804 CHPF2Q9P2E5 772 aa25.63■■□□□ 1.69
PABPC1-215ENST00000520804 HACL1Q9UJ83 578 aa25.63■■□□□ 1.69
PABPC1-215ENST00000520804 COL4A5P29400 1685 aa25.62■■□□□ 1.69
PABPC1-215ENST00000520804 TCERG1O14776 1098 aaKnown RBP25.62■■□□□ 1.69
PABPC1-215ENST00000520804 HOXB7P09629 217 aa25.62■■□□□ 1.69
PABPC1-215ENST00000520804 SLC51AQ86UW1 340 aa25.62■■□□□ 1.69
PABPC1-215ENST00000520804 GPC2Q8N158 579 aa25.62■■□□□ 1.69
PABPC1-215ENST00000520804 HDGFL1Q5TGJ6 251 aa25.61■■□□□ 1.69
PABPC1-215ENST00000520804 CFAP44Q96MT7 982 aa25.61■■□□□ 1.69
PABPC1-215ENST00000520804 EPHX2P34913 555 aa25.6■■□□□ 1.69
PABPC1-215ENST00000520804 CREBZFQ9NS37 354 aa25.6■■□□□ 1.69
PABPC1-215ENST00000520804 ATP6V0A2Q9Y487 856 aa25.6■■□□□ 1.69
PABPC1-215ENST00000520804 ABCC4O15439 1325 aa25.6■■□□□ 1.69
PABPC1-215ENST00000520804 LAMB2P55268 1798 aa25.59■■□□□ 1.69
PABPC1-215ENST00000520804 EIF6P56537 245 aaKnown RBP25.59■■□□□ 1.69
PABPC1-215ENST00000520804 EAPPQ56P03 285 aaPredicted RBP25.59■■□□□ 1.69
PABPC1-215ENST00000520804 HCLS1P14317 486 aaPredicted RBP25.58■■□□□ 1.69
PABPC1-215ENST00000520804 LARGE2Q8N3Y3 721 aa25.58■■□□□ 1.69
PABPC1-215ENST00000520804 TMX4Q9H1E5 349 aaPredicted RBP25.58■■□□□ 1.69
PABPC1-215ENST00000520804 DBF4Q9UBU7 674 aaPredicted RBP25.58■■□□□ 1.69
PABPC1-215ENST00000520804 TRMT112Q9UI30 125 aaKnown RBP25.58■■□□□ 1.69
PABPC1-215ENST00000520804 ADAMTSL1Q8N6G6 1762 aa25.58■■□□□ 1.69
PABPC1-215ENST00000520804 SH3TC1Q8TE82 1336 aa25.58■■□□□ 1.69
PABPC1-215ENST00000520804 PASKQ96RG2 1323 aa25.58■■□□□ 1.69
PABPC1-215ENST00000520804 PNMA8AQ86V59 439 aaPredicted RBP25.57■■□□□ 1.68
PABPC1-215ENST00000520804 PLBD2Q8NHP8 589 aa25.57■■□□□ 1.68
PABPC1-215ENST00000520804 BBOX1O75936 387 aa25.56■■□□□ 1.68
PABPC1-215ENST00000520804 DUSP27Q5VZP5 1158 aa25.56■■□□□ 1.68
PABPC1-215ENST00000520804 MBIPQ9NS73 344 aa25.56■■□□□ 1.68
PABPC1-215ENST00000520804 APAF1O14727 1248 aa25.55■■□□□ 1.68
PABPC1-215ENST00000520804 ITGBL1O95965 494 aaPredicted RBP25.55■■□□□ 1.68
PABPC1-215ENST00000520804 ZNF853P0CG23 659 aa25.55■■□□□ 1.68
PABPC1-215ENST00000520804 ANKRD13DQ6ZTN6 518 aa25.55■■□□□ 1.68
PABPC1-215ENST00000520804 CLEC11AQ9Y240 323 aa25.55■■□□□ 1.68
PABPC1-215ENST00000520804 GJA3Q9Y6H8 435 aa25.55■■□□□ 1.68
PABPC1-215ENST00000520804 VPS33BQ9H267 617 aa25.54■■□□□ 1.68
PABPC1-215ENST00000520804 HYPKQ9NX55 129 aa25.54■■□□□ 1.68
PABPC1-215ENST00000520804 PPIP5K2O43314 1243 aa25.53■■□□□ 1.68
PABPC1-215ENST00000520804 DDX46Q7L014 1031 aaKnown RBP25.53■■□□□ 1.68
PABPC1-215ENST00000520804 SP8Q8IXZ3 490 aa25.53■■□□□ 1.68
PABPC1-215ENST00000520804 NIM1KQ8IY84 436 aa25.53■■□□□ 1.68
PABPC1-215ENST00000520804 ISCA1Q9BUE6 129 aa25.53■■□□□ 1.68
PABPC1-215ENST00000520804 PCNTO95613 3336 aa25.53■■□□□ 1.68
PABPC1-215ENST00000520804 SUPT20HQ8NEM7 779 aa25.52■■□□□ 1.68
PABPC1-215ENST00000520804 RTFDC1Q9BY42 306 aaPredicted RBP25.52■■□□□ 1.68
PABPC1-215ENST00000520804 IFT57Q9NWB7 429 aa25.52■■□□□ 1.68
PABPC1-215ENST00000520804 MKRN1Q9UHC7 482 aaKnown RBP25.52■■□□□ 1.68
PABPC1-215ENST00000520804 LTBP1Q14766 1721 aa25.51■■□□□ 1.68
PABPC1-215ENST00000520804 HSPA1AP0DMV8 641 aaKnown RBP25.51■■□□□ 1.67
PABPC1-215ENST00000520804 HSPA1BP0DMV9 641 aaKnown RBP25.51■■□□□ 1.67
PABPC1-215ENST00000520804 CALD1Q05682 793 aaKnown RBP25.51■■□□□ 1.67
PABPC1-215ENST00000520804 GRAPQ13588 217 aa25.51■■□□□ 1.67
PABPC1-215ENST00000520804 AOC3Q16853 763 aa25.51■■□□□ 1.67
PABPC1-215ENST00000520804 GRAPLQ8TC17 118 aaPredicted RBP25.51■■□□□ 1.67
PABPC1-215ENST00000520804 LMOD1P29536 600 aaPredicted RBP25.5■■□□□ 1.67
PABPC1-215ENST00000520804 SCNN1DP51172 638 aa25.5■■□□□ 1.67
PABPC1-215ENST00000520804 DPP8Q6V1X1 898 aaPredicted RBP25.5■■□□□ 1.67
PABPC1-215ENST00000520804 DDX60Q8IY21 1712 aaKnown RBP25.5■■□□□ 1.67
PABPC1-215ENST00000520804 ZNF428Q96B54 188 aa25.5■■□□□ 1.67
PABPC1-215ENST00000520804 ATP5J2-PTCD1G3V325 749 aa25.49■■□□□ 1.67
PABPC1-215ENST00000520804 GNAI1P63096 354 aa25.49■■□□□ 1.67
PABPC1-215ENST00000520804 COL13A1Q5TAT6 717 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms