RNA–Protein interactions for RNA: ENST00000519823.2

MTCL1-208, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-208ENST00000519823 ERBB4Q15303 1308 aa16.65■□□□□ 0.26
MTCL1-208ENST00000519823 CNTNAP1P78357 1384 aa16.64■□□□□ 0.26
MTCL1-208ENST00000519823 EPHX2P34913 555 aa16.64■□□□□ 0.25
MTCL1-208ENST00000519823 SUSD4Q5VX71 490 aa16.64■□□□□ 0.25
MTCL1-208ENST00000519823 GPC2Q8N158 579 aa16.64■□□□□ 0.25
MTCL1-208ENST00000519823 COL4A5P29400 1685 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 NTSR2O95665 410 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 MYL6BP14649 208 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 PDIA6Q15084 440 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
MTCL1-208ENST00000519823 CRAMP1Q96RY5 1269 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 PNNQ9H307 717 aaKnown RBP16.63■□□□□ 0.25
MTCL1-208ENST00000519823 ZBTB3Q9H5J0 574 aa16.63■□□□□ 0.25
MTCL1-208ENST00000519823 TMEM88BA6NKF7 163 aa16.62■□□□□ 0.25
MTCL1-208ENST00000519823 ANP32CO43423 234 aa16.62■□□□□ 0.25
MTCL1-208ENST00000519823 GPTP24298 496 aa16.62■□□□□ 0.25
MTCL1-208ENST00000519823 RNF123Q5XPI4 1314 aa16.62■□□□□ 0.25
MTCL1-208ENST00000519823 EAPPQ56P03 285 aaPredicted RBP16.61■□□□□ 0.25
MTCL1-208ENST00000519823 JDP2Q8WYK2 163 aa16.61■□□□□ 0.25
MTCL1-208ENST00000519823 PARP10Q53GL7 1025 aa16.6■□□□□ 0.25
MTCL1-208ENST00000519823 SLC10A5Q5PT55 438 aa16.6■□□□□ 0.25
MTCL1-208ENST00000519823 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
MTCL1-208ENST00000519823 RPGRQ92834 1020 aaKnown RBP16.6■□□□□ 0.25
MTCL1-208ENST00000519823 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
MTCL1-208ENST00000519823 FOXN1O15353 648 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 VEGFBP49765 207 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 PPP1R42Q7Z4L9 355 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 SLC51AQ86UW1 340 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
MTCL1-208ENST00000519823 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 LTBP1Q14766 1721 aa16.59■□□□□ 0.25
MTCL1-208ENST00000519823 MAP1SQ66K74 1059 aaPredicted RBP16.58■□□□□ 0.24
MTCL1-208ENST00000519823 MIER1Q8N108 512 aa16.58■□□□□ 0.24
MTCL1-208ENST00000519823 TSPYL4Q9UJ04 414 aa16.58■□□□□ 0.24
MTCL1-208ENST00000519823 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 PPEF1O14829 653 aaPredicted RBP16.57■□□□□ 0.24
MTCL1-208ENST00000519823 CAPN15O75808 1086 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 SCNN1DP51172 638 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 EIF6P56537 245 aaKnown RBP16.57■□□□□ 0.24
MTCL1-208ENST00000519823 RIPK4P57078 832 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 WBP1LQ9NX94 342 aa16.57■□□□□ 0.24
MTCL1-208ENST00000519823 EPS15P42566 896 aa16.56■□□□□ 0.24
MTCL1-208ENST00000519823 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
MTCL1-208ENST00000519823 PRDM10Q9NQV6 1147 aa16.56■□□□□ 0.24
MTCL1-208ENST00000519823 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
MTCL1-208ENST00000519823 EIF2S2P20042 333 aaKnown RBP16.55■□□□□ 0.24
MTCL1-208ENST00000519823 TMPOP42166 694 aaKnown RBP16.55■□□□□ 0.24
MTCL1-208ENST00000519823 DEFB115Q30KQ5 88 aa16.55■□□□□ 0.24
MTCL1-208ENST00000519823 UTP14AQ9BVJ6 771 aaKnown RBP16.55■□□□□ 0.24
MTCL1-208ENST00000519823 RTFDC1Q9BY42 306 aaPredicted RBP16.55■□□□□ 0.24
MTCL1-208ENST00000519823 GJA3Q9Y6H8 435 aa16.55■□□□□ 0.24
MTCL1-208ENST00000519823 ANXA1P04083 346 aa16.54■□□□□ 0.24
MTCL1-208ENST00000519823 RALBP1Q15311 655 aa16.54■□□□□ 0.24
MTCL1-208ENST00000519823 DDX21Q9NR30 783 aaKnown RBP eCLIP16.54■□□□□ 0.24
MTCL1-208ENST00000519823 ABCC4O15439 1325 aa16.53■□□□□ 0.24
MTCL1-208ENST00000519823 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
MTCL1-208ENST00000519823 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
MTCL1-208ENST00000519823 USP50Q70EL3 339 aaPredicted RBP16.53■□□□□ 0.24
MTCL1-208ENST00000519823 COPS6Q7L5N1 327 aa16.53■□□□□ 0.24
MTCL1-208ENST00000519823 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
MTCL1-208ENST00000519823 LAMB2P55268 1798 aa16.53■□□□□ 0.24
MTCL1-208ENST00000519823 ANKRD36CQ5JPF3 1778 aa16.53■□□□□ 0.24
MTCL1-208ENST00000519823 CHL1O00533 1208 aa16.52■□□□□ 0.24
MTCL1-208ENST00000519823 PPIP5K2O43314 1243 aa16.52■□□□□ 0.24
MTCL1-208ENST00000519823 BBOX1O75936 387 aa16.52■□□□□ 0.24
MTCL1-208ENST00000519823 CTCFP49711 727 aaPredicted RBP16.52■□□□□ 0.24
MTCL1-208ENST00000519823 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.24
MTCL1-208ENST00000519823 TCIRG1Q13488 830 aa16.52■□□□□ 0.24
MTCL1-208ENST00000519823 SP8Q8IXZ3 490 aa16.52■□□□□ 0.24
MTCL1-208ENST00000519823 NIM1KQ8IY84 436 aa16.52■□□□□ 0.24
MTCL1-208ENST00000519823 FMR1Q06787 632 aaKnown RBP eCLIP16.51■□□□□ 0.23
MTCL1-208ENST00000519823 AOC3Q16853 763 aa16.51■□□□□ 0.23
MTCL1-208ENST00000519823 HSP90AB3PQ58FF7 597 aa16.51■□□□□ 0.23
MTCL1-208ENST00000519823 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
MTCL1-208ENST00000519823 ZNRF3Q9ULT6 936 aa16.51■□□□□ 0.23
MTCL1-208ENST00000519823 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
MTCL1-208ENST00000519823 WDR33Q9C0J8 1336 aaKnown RBP16.5■□□□□ 0.23
MTCL1-208ENST00000519823 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
MTCL1-208ENST00000519823 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
MTCL1-208ENST00000519823 CXCL9Q07325 125 aa16.5■□□□□ 0.23
MTCL1-208ENST00000519823 SUPT20HQ8NEM7 779 aa16.5■□□□□ 0.23
MTCL1-208ENST00000519823 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
MTCL1-208ENST00000519823 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
MTCL1-208ENST00000519823 CST9Q5W186 159 aa16.49■□□□□ 0.23
MTCL1-208ENST00000519823 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
MTCL1-208ENST00000519823 TMX4Q9H1E5 349 aaPredicted RBP16.49■□□□□ 0.23
MTCL1-208ENST00000519823 ADARB2Q9NS39 739 aaKnown RBP16.49■□□□□ 0.23
MTCL1-208ENST00000519823 PGAP2Q9UHJ9 254 aa16.49■□□□□ 0.23
MTCL1-208ENST00000519823 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
MTCL1-208ENST00000519823 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
MTCL1-208ENST00000519823 TAF1P21675 1872 aa16.48■□□□□ 0.23
MTCL1-208ENST00000519823 MAP2K1Q02750 393 aaPredicted RBP16.48■□□□□ 0.23
MTCL1-208ENST00000519823 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms