RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 NTSR2O95665 410 aa16.24■□□□□ 0.19
TRAPPC9-206ENST00000519482 CC2D2BQ6DHV5 1058 aa16.24■□□□□ 0.19
TRAPPC9-206ENST00000519482 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
TRAPPC9-206ENST00000519482 PROSER3Q2NL68 480 aa16.23■□□□□ 0.19
TRAPPC9-206ENST00000519482 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
TRAPPC9-206ENST00000519482 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
TRAPPC9-206ENST00000519482 DDX21Q9NR30 783 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRAPPC9-206ENST00000519482 SNED1Q8TER0 1413 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 DDNO94850 711 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 ANXA1P04083 346 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 HOXB7P09629 217 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 GRIPAP1Q4V328 841 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 COPS6Q7L5N1 327 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 PSMD1Q99460 953 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 LAMB2P55268 1798 aa16.22■□□□□ 0.19
TRAPPC9-206ENST00000519482 SLC10A5Q5PT55 438 aa16.21■□□□□ 0.19
TRAPPC9-206ENST00000519482 CFAP44Q96MT7 982 aa16.21■□□□□ 0.19
TRAPPC9-206ENST00000519482 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
TRAPPC9-206ENST00000519482 UTP14AQ9BVJ6 771 aaKnown RBP16.21■□□□□ 0.19
TRAPPC9-206ENST00000519482 ZNF277Q9NRM2 450 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC9-206ENST00000519482 IQCA1LA6NCM1 817 aa16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 SYNE4Q8N205 404 aa16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 XAGE3Q8WTP9 111 aa16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 NECTIN2Q92692 538 aa16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 L3MBTL3Q96JM7 780 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC9-206ENST00000519482 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
TRAPPC9-206ENST00000519482 HTRA3P83110 453 aa16.18■□□□□ 0.18
TRAPPC9-206ENST00000519482 TCIRG1Q13488 830 aa16.18■□□□□ 0.18
TRAPPC9-206ENST00000519482 HDGFL1Q5TGJ6 251 aa16.18■□□□□ 0.18
TRAPPC9-206ENST00000519482 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
TRAPPC9-206ENST00000519482 CHPF2Q9P2E5 772 aa16.18■□□□□ 0.18
TRAPPC9-206ENST00000519482 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC9-206ENST00000519482 FZD9O00144 591 aa16.17■□□□□ 0.18
TRAPPC9-206ENST00000519482 PPEF1O14829 653 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC9-206ENST00000519482 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-206ENST00000519482 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
TRAPPC9-206ENST00000519482 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
TRAPPC9-206ENST00000519482 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
TRAPPC9-206ENST00000519482 APAF1O14727 1248 aa16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 JMYQ8N9B5 988 aa16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 ZNF541Q9H0D2 1346 aa16.16■□□□□ 0.18
TRAPPC9-206ENST00000519482 GNAI1P63096 354 aa16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 ANKRD13DQ6ZTN6 518 aa16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 GPC2Q8N158 579 aa16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 TRMT112Q9UI30 125 aaKnown RBP16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
TRAPPC9-206ENST00000519482 ADAMTSL1Q8N6G6 1762 aa16.14■□□□□ 0.17
TRAPPC9-206ENST00000519482 LDHDQ86WU2 507 aa16.14■□□□□ 0.17
TRAPPC9-206ENST00000519482 VPS33BQ9H267 617 aa16.14■□□□□ 0.17
TRAPPC9-206ENST00000519482 HACL1Q9UJ83 578 aa16.14■□□□□ 0.17
TRAPPC9-206ENST00000519482 ATP6V0A2Q9Y487 856 aa16.14■□□□□ 0.17
TRAPPC9-206ENST00000519482 ABCC4O15439 1325 aa16.14■□□□□ 0.17
TRAPPC9-206ENST00000519482 BBOX1O75936 387 aa16.13■□□□□ 0.17
TRAPPC9-206ENST00000519482 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
TRAPPC9-206ENST00000519482 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
TRAPPC9-206ENST00000519482 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-206ENST00000519482 COL4A5P29400 1685 aa16.13■□□□□ 0.17
TRAPPC9-206ENST00000519482 TAF1P21675 1872 aa16.13■□□□□ 0.17
TRAPPC9-206ENST00000519482 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-206ENST00000519482 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-206ENST00000519482 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
TRAPPC9-206ENST00000519482 PNMA8AQ86V59 439 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-206ENST00000519482 LARGE2Q8N3Y3 721 aa16.12■□□□□ 0.17
TRAPPC9-206ENST00000519482 YTHDC1Q96MU7 727 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-206ENST00000519482 ISCA1Q9BUE6 129 aa16.12■□□□□ 0.17
TRAPPC9-206ENST00000519482 EPHX2P34913 555 aa16.11■□□□□ 0.17
TRAPPC9-206ENST00000519482 DDX46Q7L014 1031 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-206ENST00000519482 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
TRAPPC9-206ENST00000519482 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
TRAPPC9-206ENST00000519482 RTFDC1Q9BY42 306 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC9-206ENST00000519482 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
TRAPPC9-206ENST00000519482 LRRC37AA6NMS7 1700 aa16.11■□□□□ 0.17
TRAPPC9-206ENST00000519482 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
TRAPPC9-206ENST00000519482 GRAPQ13588 217 aa16.1■□□□□ 0.17
TRAPPC9-206ENST00000519482 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
TRAPPC9-206ENST00000519482 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC9-206ENST00000519482 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
TRAPPC9-206ENST00000519482 PPIP5K2O43314 1243 aa16.09■□□□□ 0.17
TRAPPC9-206ENST00000519482 EAPPQ56P03 285 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC9-206ENST00000519482 NIM1KQ8IY84 436 aa16.09■□□□□ 0.17
TRAPPC9-206ENST00000519482 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
TRAPPC9-206ENST00000519482 LTBP1Q14766 1721 aa16.08■□□□□ 0.17
TRAPPC9-206ENST00000519482 GOLGA2Q08379 1002 aa16.08■□□□□ 0.16
TRAPPC9-206ENST00000519482 DPP8Q6V1X1 898 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms