RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 QSER1Q2KHR3 1735 aa9.14□□□□□ -0.95
MRPS28-205ENST00000519386 CRKLP46109 303 aaKnown RBP9.14□□□□□ -0.95
MRPS28-205ENST00000519386 LCE2DQ5TA82 110 aaPredicted RBP9.14□□□□□ -0.95
MRPS28-205ENST00000519386 AMIGO3Q86WK7 504 aa9.14□□□□□ -0.95
MRPS28-205ENST00000519386 TSPYL6Q8N831 410 aa9.14□□□□□ -0.95
MRPS28-205ENST00000519386 C8orf58Q8NAV2 365 aa9.14□□□□□ -0.95
MRPS28-205ENST00000519386 AK7Q96M32 723 aa9.14□□□□□ -0.95
MRPS28-205ENST00000519386 NOB1Q9ULX3 412 aaKnown RBP9.14□□□□□ -0.95
MRPS28-205ENST00000519386 PNPLA7Q6ZV29 1317 aa9.13□□□□□ -0.95
MRPS28-205ENST00000519386 CNTNAP4Q9C0A0 1308 aa9.13□□□□□ -0.95
MRPS28-205ENST00000519386 PRAMEF22A3QJZ6 481 aa9.13□□□□□ -0.95
MRPS28-205ENST00000519386 CYP19A1P11511 503 aaPredicted RBP9.13□□□□□ -0.95
MRPS28-205ENST00000519386 EIF4A1P60842 406 aaKnown RBP9.13□□□□□ -0.95
MRPS28-205ENST00000519386 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
MRPS28-205ENST00000519386 SMIM5Q71RC9 77 aa9.13□□□□□ -0.95
MRPS28-205ENST00000519386 VSIG10Q8N0Z9 540 aa9.13□□□□□ -0.95
MRPS28-205ENST00000519386 PDGFDQ9GZP0 370 aaPredicted RBP9.13□□□□□ -0.95
MRPS28-205ENST00000519386 TFCP2L1Q9NZI6 479 aa9.13□□□□□ -0.95
MRPS28-205ENST00000519386 CASZ1Q86V15 1759 aa9.13□□□□□ -0.95
MRPS28-205ENST00000519386 IBTKQ9P2D0 1353 aaPredicted RBP9.12□□□□□ -0.95
MRPS28-205ENST00000519386 GNPATO15228 680 aa9.12□□□□□ -0.95
MRPS28-205ENST00000519386 SNRPA1P09661 255 aaKnown RBP9.12□□□□□ -0.95
MRPS28-205ENST00000519386 HMGB2P26583 209 aaKnown RBP9.12□□□□□ -0.95
MRPS28-205ENST00000519386 KRT24Q2M2I5 525 aa9.12□□□□□ -0.95
MRPS28-205ENST00000519386 RC3H1Q5TC82 1133 aaKnown RBP9.12□□□□□ -0.95
MRPS28-205ENST00000519386 INTS3Q68E01 1043 aaKnown RBP9.12□□□□□ -0.95
MRPS28-205ENST00000519386 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
MRPS28-205ENST00000519386 ITPRIPQ8IWB1 547 aa9.12□□□□□ -0.95
MRPS28-205ENST00000519386 ZBTB40Q9NUA8 1239 aa9.12□□□□□ -0.95
MRPS28-205ENST00000519386 CCDC87Q9NVE4 849 aa9.12□□□□□ -0.95
MRPS28-205ENST00000519386 GIGYF1O75420 1035 aaPredicted RBP9.11□□□□□ -0.95
MRPS28-205ENST00000519386 PHF14O94880 888 aa9.11□□□□□ -0.95
MRPS28-205ENST00000519386 STARD3NLO95772 234 aa9.11□□□□□ -0.95
MRPS28-205ENST00000519386 CCDC30Q5VVM6 783 aa9.11□□□□□ -0.95
MRPS28-205ENST00000519386 TMEM57Q8N5G2 664 aa9.11□□□□□ -0.95
MRPS28-205ENST00000519386 STK31Q9BXU1 1019 aa9.11□□□□□ -0.95
MRPS28-205ENST00000519386 TEX13AQ9BXU3 409 aaPredicted RBP9.11□□□□□ -0.95
MRPS28-205ENST00000519386 RWDD1Q9H446 243 aaPredicted RBP9.11□□□□□ -0.95
MRPS28-205ENST00000519386 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
MRPS28-205ENST00000519386 USP16Q9Y5T5 823 aa9.11□□□□□ -0.95
MRPS28-205ENST00000519386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
MRPS28-205ENST00000519386 RPS6KA4O75676 772 aa9.1□□□□□ -0.95
MRPS28-205ENST00000519386 PPP1R37O75864 691 aa9.1□□□□□ -0.95
MRPS28-205ENST00000519386 SSFA2P28290 1259 aa9.1□□□□□ -0.95
MRPS28-205ENST00000519386 TMEM92Q6UXU6 159 aa9.1□□□□□ -0.95
MRPS28-205ENST00000519386 COL23A1Q86Y22 540 aaPredicted RBP9.1□□□□□ -0.95
MRPS28-205ENST00000519386 RTCBQ9Y3I0 505 aaKnown RBP9.1□□□□□ -0.95
MRPS28-205ENST00000519386 C4AP0C0L4 1744 aa9.1□□□□□ -0.95
MRPS28-205ENST00000519386 ATP10DQ9P241 1426 aa9.09□□□□□ -0.95
MRPS28-205ENST00000519386 ZBTB7AO95365 584 aa9.09□□□□□ -0.95
MRPS28-205ENST00000519386 A1BGP04217 495 aa9.09□□□□□ -0.95
MRPS28-205ENST00000519386 PIP4K2AP48426 406 aaPredicted RBP9.09□□□□□ -0.95
MRPS28-205ENST00000519386 FLAD1Q8NFF5 587 aa9.09□□□□□ -0.95
MRPS28-205ENST00000519386 FAM163AQ96GL9 167 aaPredicted RBP9.09□□□□□ -0.95
MRPS28-205ENST00000519386 TNNQ9UQP3 1299 aa9.09□□□□□ -0.95
MRPS28-205ENST00000519386 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
MRPS28-205ENST00000519386 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
MRPS28-205ENST00000519386 EIF2S2P20042 333 aaKnown RBP9.08□□□□□ -0.96
MRPS28-205ENST00000519386 CCT4P50991 539 aaKnown RBP9.08□□□□□ -0.96
MRPS28-205ENST00000519386 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
MRPS28-205ENST00000519386 NBPF10Q6P3W6 841 aaKnown RBP9.08□□□□□ -0.96
MRPS28-205ENST00000519386 NBPF15Q8N660 670 aa9.08□□□□□ -0.96
MRPS28-205ENST00000519386 ZNF330Q9Y3S2 320 aaPredicted RBP9.08□□□□□ -0.96
MRPS28-205ENST00000519386 PCDHB15Q9Y5E8 787 aa9.08□□□□□ -0.96
MRPS28-205ENST00000519386 COL15A1P39059 1388 aa9.08□□□□□ -0.96
MRPS28-205ENST00000519386 AFDNP55196 1824 aaKnown RBP9.08□□□□□ -0.96
MRPS28-205ENST00000519386 SRCAPQ6ZRS2 3230 aa9.07□□□□□ -0.96
MRPS28-205ENST00000519386 ELL2O00472 640 aaPredicted RBP9.07□□□□□ -0.96
MRPS28-205ENST00000519386 ZBTB7BO15156 539 aaPredicted RBP9.07□□□□□ -0.96
MRPS28-205ENST00000519386 EIF5P55010 431 aaKnown RBP9.07□□□□□ -0.96
MRPS28-205ENST00000519386 MSL1Q68DK7 614 aa9.07□□□□□ -0.96
MRPS28-205ENST00000519386 SMC5Q8IY18 1101 aa9.07□□□□□ -0.96
MRPS28-205ENST00000519386 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
MRPS28-205ENST00000519386 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
MRPS28-205ENST00000519386 SRP68Q9UHB9 627 aaKnown RBP9.07□□□□□ -0.96
MRPS28-205ENST00000519386 SNPHO15079 494 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 IGHDP01880 384 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 RFC4P35249 363 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 IL6STP40189 918 aaPredicted RBP9.06□□□□□ -0.96
MRPS28-205ENST00000519386 FLIIQ13045 1269 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 PROSER3Q2NL68 480 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 SLC16A10Q8TF71 515 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 GCC1Q96CN9 775 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 MTFR1LQ9H019 292 aa9.06□□□□□ -0.96
MRPS28-205ENST00000519386 RBM19Q9Y4C8 960 aaKnown RBP9.06□□□□□ -0.96
MRPS28-205ENST00000519386 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
MRPS28-205ENST00000519386 COL24A1Q17RW2 1714 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 ANXA1P04083 346 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 MYL6BP14649 208 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 PDIA6Q15084 440 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 SPON1Q9HCB6 807 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 DBF4Q9UBU7 674 aaPredicted RBP9.05□□□□□ -0.96
MRPS28-205ENST00000519386 TBC1D2BQ9UPU7 963 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 LRP5O75197 1615 aa9.05□□□□□ -0.96
MRPS28-205ENST00000519386 BCORQ6W2J9 1755 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 SCN7AQ01118 1682 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 A0A087WZG4 1122 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 ST18O60284 1047 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms