RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
MRPS28-203ENST00000518371 GLI3P10071 1580 aa8.31□□□□□ -1.08
MRPS28-203ENST00000518371 CRB1P82279 1406 aa8.31□□□□□ -1.08
MRPS28-203ENST00000518371 J3QL48 77 aa8.31□□□□□ -1.08
MRPS28-203ENST00000518371 KDM4AO75164 1064 aa8.31□□□□□ -1.08
MRPS28-203ENST00000518371 CNGB1Q14028 1251 aaPredicted RBP8.31□□□□□ -1.08
MRPS28-203ENST00000518371 ZC3H15Q8WU90 426 aaKnown RBP8.31□□□□□ -1.08
MRPS28-203ENST00000518371 IRF7Q92985 503 aa8.31□□□□□ -1.08
MRPS28-203ENST00000518371 CDCA7Q9BWT1 371 aaPredicted RBP8.31□□□□□ -1.08
MRPS28-203ENST00000518371 CCDC7Q96M83 1385 aa8.31□□□□□ -1.08
MRPS28-203ENST00000518371 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.31□□□□□ -1.08
MRPS28-203ENST00000518371 WASHC2AQ641Q2 1341 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 NFAT5O94916 1531 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 EXOC5O00471 708 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 ZBTB24O43167 697 aaPredicted RBP8.3□□□□□ -1.08
MRPS28-203ENST00000518371 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
MRPS28-203ENST00000518371 DDB1Q16531 1140 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 CCDC125Q86Z20 511 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 GPCPD1Q9NPB8 672 aa8.3□□□□□ -1.08
MRPS28-203ENST00000518371 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
MRPS28-203ENST00000518371 CLCN1P35523 988 aa8.29□□□□□ -1.08
MRPS28-203ENST00000518371 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
MRPS28-203ENST00000518371 HSP90AB2PQ58FF8 381 aa8.29□□□□□ -1.08
MRPS28-203ENST00000518371 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
MRPS28-203ENST00000518371 HPS1Q92902 700 aa8.29□□□□□ -1.08
MRPS28-203ENST00000518371 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
MRPS28-203ENST00000518371 PER1O15534 1290 aaPredicted RBP8.28□□□□□ -1.08
MRPS28-203ENST00000518371 IL2RBP14784 551 aa8.28□□□□□ -1.08
MRPS28-203ENST00000518371 MSS51Q4VC12 460 aa8.28□□□□□ -1.08
MRPS28-203ENST00000518371 CC2D1BQ5T0F9 858 aaKnown RBP8.28□□□□□ -1.08
MRPS28-203ENST00000518371 FAM196AQ6ZSG2 479 aa8.28□□□□□ -1.08
MRPS28-203ENST00000518371 POLKQ9UBT6 870 aa8.28□□□□□ -1.08
MRPS28-203ENST00000518371 NRAPQ86VF7 1730 aa8.28□□□□□ -1.08
MRPS28-203ENST00000518371 BLMP54132 1417 aaPredicted RBP8.28□□□□□ -1.08
MRPS28-203ENST00000518371 LMO7Q8WWI1 1683 aa8.27□□□□□ -1.08
MRPS28-203ENST00000518371 NSD2O96028 1365 aa8.27□□□□□ -1.09
MRPS28-203ENST00000518371 HOXA2O43364 376 aa8.27□□□□□ -1.09
MRPS28-203ENST00000518371 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
MRPS28-203ENST00000518371 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
MRPS28-203ENST00000518371 RTL1A6NKG5 1358 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 INSRP06213 1382 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 FLT4P35916 1363 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 COL18A1P39060 1754 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 USP46P62068 366 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 NBPF6Q5VWK0 638 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 RAPGEF4Q8WZA2 1011 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 NBPF4Q96M43 638 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 MYOM1P52179 1685 aa8.26□□□□□ -1.09
MRPS28-203ENST00000518371 SMG6Q86US8 1419 aaKnown RBP8.26□□□□□ -1.09
MRPS28-203ENST00000518371 KIF24Q5T7B8 1368 aa8.25□□□□□ -1.09
MRPS28-203ENST00000518371 ABCC6O95255 1503 aa8.25□□□□□ -1.09
MRPS28-203ENST00000518371 TRIM37O94972 964 aa8.25□□□□□ -1.09
MRPS28-203ENST00000518371 TATP17735 454 aaPredicted RBP8.25□□□□□ -1.09
MRPS28-203ENST00000518371 BAG6P46379 1132 aa8.25□□□□□ -1.09
MRPS28-203ENST00000518371 Q3C1V9 767 aa8.25□□□□□ -1.09
MRPS28-203ENST00000518371 MARCH10Q8NA82 808 aaPredicted RBP8.25□□□□□ -1.09
MRPS28-203ENST00000518371 DDX54Q8TDD1 881 aaKnown RBP8.25□□□□□ -1.09
MRPS28-203ENST00000518371 SYMPKQ92797 1274 aaKnown RBP8.25□□□□□ -1.09
MRPS28-203ENST00000518371 USP54Q70EL1 1684 aa8.24□□□□□ -1.09
MRPS28-203ENST00000518371 APBA3O96018 575 aa8.24□□□□□ -1.09
MRPS28-203ENST00000518371 MMP16P51512 607 aa8.24□□□□□ -1.09
MRPS28-203ENST00000518371 DEFB132Q7Z7B7 95 aa8.24□□□□□ -1.09
MRPS28-203ENST00000518371 KCTD17Q8N5Z5 321 aa8.24□□□□□ -1.09
MRPS28-203ENST00000518371 USB1Q9BQ65 265 aaKnown RBP8.24□□□□□ -1.09
MRPS28-203ENST00000518371 H3BM21 787 aa8.23□□□□□ -1.09
MRPS28-203ENST00000518371 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
MRPS28-203ENST00000518371 VEGFBP49765 207 aa8.23□□□□□ -1.09
MRPS28-203ENST00000518371 MTHFSP49914 203 aa8.23□□□□□ -1.09
MRPS28-203ENST00000518371 DDX10Q13206 875 aaKnown RBP8.23□□□□□ -1.09
MRPS28-203ENST00000518371 EIF4A2Q14240 407 aaKnown RBP8.23□□□□□ -1.09
MRPS28-203ENST00000518371 AMHR2Q16671 573 aa8.23□□□□□ -1.09
MRPS28-203ENST00000518371 ZCRB1Q8TBF4 217 aaKnown RBP8.23□□□□□ -1.09
MRPS28-203ENST00000518371 ERBB4Q15303 1308 aa8.23□□□□□ -1.09
MRPS28-203ENST00000518371 KIF20BQ96Q89 1820 aa8.22□□□□□ -1.09
MRPS28-203ENST00000518371 DXOO77932 396 aaKnown RBP8.22□□□□□ -1.09
MRPS28-203ENST00000518371 KCNMA1Q12791 1236 aa8.22□□□□□ -1.09
MRPS28-203ENST00000518371 TRIM32Q13049 653 aa8.22□□□□□ -1.09
MRPS28-203ENST00000518371 LTN1O94822 1766 aa8.22□□□□□ -1.09
MRPS28-203ENST00000518371 RGPD5Q99666 1765 aa8.22□□□□□ -1.09
MRPS28-203ENST00000518371 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
MRPS28-203ENST00000518371 OVOS2A0A0G2JMS6 1433 aa8.21□□□□□ -1.09
MRPS28-203ENST00000518371 DISP2A7MBM2 1401 aa8.21□□□□□ -1.09
MRPS28-203ENST00000518371 THSD7AQ9UPZ6 1657 aa8.21□□□□□ -1.09
MRPS28-203ENST00000518371 ACSBG1Q96GR2 724 aa8.21□□□□□ -1.1
MRPS28-203ENST00000518371 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
MRPS28-203ENST00000518371 BRWD3Q6RI45 1802 aa8.21□□□□□ -1.1
MRPS28-203ENST00000518371 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
MRPS28-203ENST00000518371 NUTM1Q86Y26 1132 aa8.2□□□□□ -1.1
MRPS28-203ENST00000518371 CFAP53Q96M91 514 aa8.2□□□□□ -1.1
MRPS28-203ENST00000518371 SPG7Q9UQ90 795 aa8.2□□□□□ -1.1
MRPS28-203ENST00000518371 KCNQ2O43526 872 aa8.19□□□□□ -1.1
MRPS28-203ENST00000518371 IL13P35225 146 aa8.19□□□□□ -1.1
MRPS28-203ENST00000518371 TTLL12Q14166 644 aaPredicted RBP8.19□□□□□ -1.1
MRPS28-203ENST00000518371 EZH2Q15910 746 aaKnown RBP8.19□□□□□ -1.1
MRPS28-203ENST00000518371 SULT6B1Q6IMI4 303 aa8.19□□□□□ -1.1
MRPS28-203ENST00000518371 SPIRE2Q8WWL2 714 aa8.19□□□□□ -1.1
MRPS28-203ENST00000518371 SYTL4Q96C24 671 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms