RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 HCN2Q9UL51 889 aa7.26□□□□□ -1.25
PABPC1-206ENST00000518293 ZNF232Q9UNY5 417 aa7.26□□□□□ -1.25
PABPC1-206ENST00000518293 NISCHQ9Y2I1 1504 aa7.26□□□□□ -1.25
PABPC1-206ENST00000518293 CARNS1A5YM72 827 aa7.25□□□□□ -1.25
PABPC1-206ENST00000518293 TMEM88BA6NKF7 163 aa7.25□□□□□ -1.25
PABPC1-206ENST00000518293 OCLNQ16625 522 aa7.25□□□□□ -1.25
PABPC1-206ENST00000518293 XP32Q5T750 250 aa7.25□□□□□ -1.25
PABPC1-206ENST00000518293 STAG2Q8N3U4 1231 aa7.25□□□□□ -1.25
PABPC1-206ENST00000518293 HCN4Q9Y3Q4 1203 aa7.25□□□□□ -1.25
PABPC1-206ENST00000518293 EFSO43281 561 aa7.24□□□□□ -1.25
PABPC1-206ENST00000518293 PRMT3O60678 531 aa7.24□□□□□ -1.25
PABPC1-206ENST00000518293 ALAS2P22557 587 aa7.24□□□□□ -1.25
PABPC1-206ENST00000518293 CHRNA4P43681 627 aa7.24□□□□□ -1.25
PABPC1-206ENST00000518293 HIRAP54198 1017 aaPredicted RBP7.24□□□□□ -1.25
PABPC1-206ENST00000518293 STRN4Q9NRL3 753 aa7.24□□□□□ -1.25
PABPC1-206ENST00000518293 ELOA3CA0A087WX78 387 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-206ENST00000518293 ELOA3DA6NLF2 546 aaPredicted RBP7.23□□□□□ -1.25
PABPC1-206ENST00000518293 ELOA3BQ3SY89 546 aa7.23□□□□□ -1.25
PABPC1-206ENST00000518293 LRRC69Q6ZNQ3 347 aa7.23□□□□□ -1.25
PABPC1-206ENST00000518293 ELOA3Q8NG57 546 aa7.23□□□□□ -1.25
PABPC1-206ENST00000518293 CLP1Q92989 425 aaKnown RBP7.23□□□□□ -1.25
PABPC1-206ENST00000518293 FKBP5Q13451 457 aaPredicted RBP7.22□□□□□ -1.25
PABPC1-206ENST00000518293 SYT9Q86SS6 491 aa7.22□□□□□ -1.25
PABPC1-206ENST00000518293 PLVAPQ9BX97 442 aa7.22□□□□□ -1.25
PABPC1-206ENST00000518293 CHMP3Q9Y3E7 222 aa7.22□□□□□ -1.25
PABPC1-206ENST00000518293 GPC6Q9Y625 555 aaPredicted RBP7.22□□□□□ -1.25
PABPC1-206ENST00000518293 SPDYE3A6NKU9 549 aa7.21□□□□□ -1.26
PABPC1-206ENST00000518293 FOXO3O43524 673 aa7.21□□□□□ -1.26
PABPC1-206ENST00000518293 SPATA31C1P0DKV0 1188 aa7.21□□□□□ -1.26
PABPC1-206ENST00000518293 C1orf53Q5VUE5 145 aa7.21□□□□□ -1.26
PABPC1-206ENST00000518293 ALDH16A1Q8IZ83 802 aa7.21□□□□□ -1.26
PABPC1-206ENST00000518293 TRIM11Q96F44 468 aa7.21□□□□□ -1.26
PABPC1-206ENST00000518293 PHACTR1Q9C0D0 580 aa7.21□□□□□ -1.26
PABPC1-206ENST00000518293 CXXC1Q9P0U4 656 aaPredicted RBP7.21□□□□□ -1.26
PABPC1-206ENST00000518293 RETREG2Q8NC44 543 aa7.2□□□□□ -1.26
PABPC1-206ENST00000518293 RHPN1Q8TCX5 695 aa7.2□□□□□ -1.26
PABPC1-206ENST00000518293 SIN3BO75182 1162 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 ATP2B4P23634 1241 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 GATA4P43694 442 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 NEUROD1Q13562 356 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 DOC2BQ14184 412 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 PRRT3Q5FWE3 981 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 CAPN12Q6ZSI9 719 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 NGLY1Q96IV0 654 aa7.19□□□□□ -1.26
PABPC1-206ENST00000518293 Q8N3U1 123 aa7.18□□□□□ -1.26
PABPC1-206ENST00000518293 QTRT2Q9H974 415 aaKnown RBP7.18□□□□□ -1.26
PABPC1-206ENST00000518293 ADARB2-AS1A8MUL3 147 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 SSFA2P28290 1259 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 SCNN1AP37088 669 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
PABPC1-206ENST00000518293 PHLDB3Q6NSJ2 640 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 ZNF280CQ8ND82 737 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 SEMA6BQ9H3T3 888 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 ANKIB1Q9P2G1 1089 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 USTQ9Y2C2 406 aa7.17□□□□□ -1.26
PABPC1-206ENST00000518293 M0R082 166 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 APBA3O96018 575 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 SPEM2Q0P670 501 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 RTN1Q16799 776 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 ZNF417Q8TAU3 575 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 TNFRSF25Q93038 417 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 CEP63Q96MT8 703 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 ZNF587Q96SQ5 575 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-206ENST00000518293 SLC30A3Q99726 388 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 MDFIQ99750 246 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 MKNK1Q9BUB5 465 aa7.16□□□□□ -1.26
PABPC1-206ENST00000518293 COL26A1Q96A83 441 aa7.15□□□□□ -1.26
PABPC1-206ENST00000518293 HSH2DQ96JZ2 352 aa7.15□□□□□ -1.26
PABPC1-206ENST00000518293 SUSD3Q96L08 255 aa7.15□□□□□ -1.26
PABPC1-206ENST00000518293 SAP130Q9H0E3 1048 aa7.15□□□□□ -1.26
PABPC1-206ENST00000518293 BRD7Q9NPI1 651 aa7.15□□□□□ -1.26
PABPC1-206ENST00000518293 LRFN2Q9ULH4 789 aa7.15□□□□□ -1.26
PABPC1-206ENST00000518293 BCS1LQ9Y276 419 aa7.15□□□□□ -1.26
PABPC1-206ENST00000518293 ADH7P40394 386 aa7.14□□□□□ -1.27
PABPC1-206ENST00000518293 NAA30Q147X3 362 aaPredicted RBP7.14□□□□□ -1.27
PABPC1-206ENST00000518293 COX20Q5RI15 118 aa7.14□□□□□ -1.27
PABPC1-206ENST00000518293 MYO19Q96H55 970 aa7.14□□□□□ -1.27
PABPC1-206ENST00000518293 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.14□□□□□ -1.27
PABPC1-206ENST00000518293 KLK14Q9P0G3 267 aa7.14□□□□□ -1.27
PABPC1-206ENST00000518293 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
PABPC1-206ENST00000518293 TRIM28Q13263 835 aaKnown RBP7.13□□□□□ -1.27
PABPC1-206ENST00000518293 DGKZQ13574 1117 aa7.13□□□□□ -1.27
PABPC1-206ENST00000518293 RAB44Q7Z6P3 723 aaPredicted RBP7.13□□□□□ -1.27
PABPC1-206ENST00000518293 PRDM6Q9NQX0 595 aa7.13□□□□□ -1.27
PABPC1-206ENST00000518293 KCNH4Q9UQ05 1017 aa7.13□□□□□ -1.27
PABPC1-206ENST00000518293 PTCD1O75127 700 aaKnown RBP7.12□□□□□ -1.27
PABPC1-206ENST00000518293 ALBP02768 609 aa7.12□□□□□ -1.27
PABPC1-206ENST00000518293 MICALL1Q8N3F8 863 aa7.12□□□□□ -1.27
PABPC1-206ENST00000518293 NACC1Q96RE7 527 aa7.12□□□□□ -1.27
PABPC1-206ENST00000518293 DMGDHQ9UI17 866 aaKnown RBP7.12□□□□□ -1.27
PABPC1-206ENST00000518293 STARD13Q9Y3M8 1113 aa7.12□□□□□ -1.27
PABPC1-206ENST00000518293 FAM229AH3BQW9 127 aa7.11□□□□□ -1.27
PABPC1-206ENST00000518293 KCNQ4P56696 695 aa7.11□□□□□ -1.27
PABPC1-206ENST00000518293 C11orf91Q3C1V1 193 aa7.11□□□□□ -1.27
PABPC1-206ENST00000518293 C16orf46Q6P387 395 aa7.11□□□□□ -1.27
PABPC1-206ENST00000518293 C8orf86Q6ZUL3 223 aa7.11□□□□□ -1.27
PABPC1-206ENST00000518293 TGFBR3LH3BV60 316 aa7.1□□□□□ -1.27
PABPC1-206ENST00000518293 ITGB7P26010 798 aa7.1□□□□□ -1.27
PABPC1-206ENST00000518293 TYRO3Q06418 890 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms