RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 SMTNP53814 917 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 ANAPC15P60006 121 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 SH3BP2P78314 561 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 TRIM32Q13049 653 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 SERINC3Q13530 473 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 TAF1CQ15572 869 aaPredicted RBP3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 C11orf91Q3C1V1 193 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 VASH1Q7L8A9 365 aaPredicted RBP3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 CYP4X1Q8N118 509 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 ZCRB1Q8TBF4 217 aaKnown RBP3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 GPRASP2Q96D09 838 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 NGLY1Q96IV0 654 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 C12orf49Q9H741 205 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 TMPRSS4Q9NRS4 437 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 MAP4K5Q9Y4K4 846 aa3.61□□□□□ -1.83
SCARNA3-201ENST00000517097 A6NHS1 94 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 WNT7AO00755 349 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 ENPP3O14638 875 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 GIPC1O14908 333 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 AXIN1O15169 862 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 CPNE3O75131 537 aaKnown RBP3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 PCSK2P16519 638 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 DGKZQ13574 1117 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 ESCO1Q5FWF5 840 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 LCE2AQ5TA79 106 aaPredicted RBP3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 MEI1Q5TIA1 1274 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 NBPF6Q5VWK0 638 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 POTEAQ6S8J7 498 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 FILIP1Q7Z7B0 1213 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 RASGRP4Q8TDF6 673 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 MKL1Q969V6 931 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 NUDT16Q96DE0 195 aaKnown RBP3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 MRGPRX2Q96LB1 330 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 NBPF4Q96M43 638 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 OSBPL7Q9BZF2 842 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 GGNBP2Q9H3C7 697 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 PCDH12Q9NPG4 1184 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 IFT57Q9NWB7 429 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 SLC52A1Q9NWF4 448 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 GMPR2Q9P2T1 348 aaKnown RBP3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 SUGT1Q9Y2Z0 365 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 CHMP3Q9Y3E7 222 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 COL4A3BPQ9Y5P4 624 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 USP3Q9Y6I4 520 aa3.6□□□□□ -1.83
SCARNA3-201ENST00000517097 SERTM1A2A2V5 107 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 TTC24A2A3L6 582 aaPredicted RBP3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 J3QL48 77 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 EML1O00423 815 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 CDK2AP1O14519 115 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 PARNO95453 639 aaKnown RBP3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 GNRH1P01148 92 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 SSBP05455 408 aaKnown RBP eCLIP3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 SMPD1P17405 629 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 SMCPP49901 116 aaPredicted RBP3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 ST13P50502 369 aaKnown RBP3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 WNT7BP56706 349 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 SKOR1P84550 965 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 RTN1Q16799 776 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 CTC1Q2NKJ3 1217 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 C8orf34Q49A92 452 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 SH3PXD2AQ5TCZ1 1133 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 CCDC181Q5TID7 509 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 PI16Q6UXB8 463 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 ERMP1Q7Z2K6 904 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 CYP2U1Q7Z449 544 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 ALDH16A1Q8IZ83 802 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 SNIP1Q8TAD8 396 aaKnown RBP3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 GPR152Q8TDT2 470 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 IFT43Q96FT9 208 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 SEC16BQ96JE7 1060 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 RNPC3Q96LT9 517 aaKnown RBP3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 ZNF408Q9H9D4 720 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 COPRSQ9NQ92 184 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 RAB6BQ9NRW1 208 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 KLK14Q9P0G3 267 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 FAM8A1Q9UBU6 413 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 HCN4Q9Y3Q4 1203 aa3.59□□□□□ -1.83
SCARNA3-201ENST00000517097 LILRA1O75019 489 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 USP17L7P0C7H9 530 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 VARSP26640 1264 aaKnown RBP3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 NOS2P35228 1153 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 HIRAP54198 1017 aaPredicted RBP3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 DHX9Q08211 1270 aaKnown RBP3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 NFX1Q12986 1120 aaKnown RBP3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 TEAD4Q15561 434 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 USPL1Q5W0Q7 1092 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 TREML4Q6UXN2 200 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 TREML1Q86YW5 311 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 ZNF784Q8NCA9 323 aaPredicted RBP3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 TTC16Q8NEE8 873 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 EPS8L3Q8TE67 593 aaKnown RBP3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 ZDHHC1Q8WTX9 485 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 TRIM52Q96A61 297 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 CCDC74AQ96AQ1 378 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 XAGE2Q96GT9 111 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 SRPK1Q96SB4 655 aaKnown RBP3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 SPC25Q9HBM1 224 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 SIRPGQ9P1W8 387 aa3.58□□□□□ -1.84
SCARNA3-201ENST00000517097 LOC102724159A0A0B4J2E5 919 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms