RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 TSGA10IPQ3SY00 556 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 UTP14CQ5TAP6 766 aaKnown RBP3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 KSR2Q6VAB6 950 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 VSIG10Q8N0Z9 540 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ABTB2Q8N961 1025 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 IP6K1Q92551 441 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PKNOX2Q96KN3 472 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 JAKMIP1Q96N16 626 aaKnown RBP3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 GTPBP4Q9BZE4 634 aaKnown RBP3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 UPF3BQ9BZI7 483 aaKnown RBP3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 TNMDQ9H2S6 317 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 FAM13BQ9NYF5 915 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 AMOTL2Q9Y2J4 779 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 SNX14Q9Y5W7 946 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 U3KPZ7 1027 aaPredicted RBP3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ABCC12Q96J65 1359 aa3.99□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 LAMA4Q16363 1823 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 VPS37CA5D8V6 355 aaPredicted RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 BTBD11A6QL63 1104 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 H3BQV1 296 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 GRM8O00222 908 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 KIF20AO95235 890 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 EIF4A1P60842 406 aaKnown RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 FGD1P98174 961 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 MLECQ14165 292 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 STX1AQ16623 288 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 KRT24Q2M2I5 525 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 BEND3Q5T5X7 828 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 IFFO2Q5TF58 517 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 LARP1BQ659C4 914 aaKnown RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CYB5RLQ6IPT4 315 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 LARP1Q6PKG0 1096 aaKnown RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CWC27Q6UX04 472 aaKnown RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CCDC73Q6ZRK6 1079 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 G2E3Q7L622 706 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 RNF214Q8ND24 703 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 MAP4K1Q92918 833 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CCDC34Q96HJ3 373 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 SPATA32Q96LK8 384 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ZNF396Q96N95 335 aaPredicted RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 FSD1Q9BTV5 496 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CGNQ9P2M7 1197 aaKnown RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 RBM27Q9P2N5 1060 aaKnown RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ZRANB1Q9UGI0 708 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PALD1Q9ULE6 856 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 RGPD2P0DJD1 1756 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 MED23Q9ULK4 1368 aa3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 TRPM3Q9HCF6 1732 aaPredicted RBP3.98□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 C5P01031 1676 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ALS2Q96Q42 1657 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 DCCP43146 1447 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PI4KAP2A4QPH2 592 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 SMTNL1A8MU46 457 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 BECN2A8MW95 431 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 KINO60870 393 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 HCLS1P14317 486 aaPredicted RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 FBLN1P23142 703 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 RPS6KB1P23443 525 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 KCNJ6P48051 423 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 TYRO3Q06418 890 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 NECTIN1Q15223 517 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CREB3L3Q68CJ9 461 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 NAA16Q6N069 864 aaPredicted RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PRPF40BQ6NWY9 871 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ZNF530Q6P9A1 599 aaPredicted RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 SARM1Q6SZW1 724 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 RBM43Q6ZSC3 357 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 NOL8Q76FK4 1167 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 AACSQ86V21 672 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 NUTM1Q86Y26 1132 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CCDC83Q8IWF9 413 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 DRC7Q8IY82 874 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CEP57L1Q8IYX8 460 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PI4KAP1Q8N8J0 262 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 TDRD7Q8NHU6 1098 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 KIAA1524Q8TCG1 905 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 MRFAP1L1Q96HT8 127 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CLSTN2Q9H4D0 955 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 IL1RAPL2Q9NP60 686 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 DDX21Q9NR30 783 aaKnown RBP eCLIP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ANO10Q9NW15 660 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CHPF2Q9P2E5 772 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 IMPACTQ9P2X3 320 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 HOOK1Q9UJC3 728 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PHF8Q9UPP1 1060 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 MTMR6Q9Y217 621 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CNPY2Q9Y2B0 182 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 RBM8AQ9Y5S9 174 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 ADCY9O60503 1353 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 PALLDQ8WX93 1383 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 HEG1Q9ULI3 1381 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 CHD4Q14839 1912 aa3.97□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 WDR19Q8NEZ3 1342 aa3.96□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 SH3TC1Q8TE82 1336 aa3.96□□□□□ -1.77
RNU4ATAC3P-201ENST00000516699 NUP188Q5SRE5 1749 aa3.96□□□□□ -1.78
RNU4ATAC3P-201ENST00000516699 DDX60Q8IY21 1712 aaKnown RBP3.96□□□□□ -1.78
RNU4ATAC3P-201ENST00000516699 MYH3P11055 1940 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms