RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 SENP3-EIF4A1A0A087X0R7 540 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ANKRD33BA6NCL7 494 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ATXN7O15265 892 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 EGFRP00533 1210 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PDGFAP04085 211 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PLCB3Q01970 1234 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 DNM1Q05193 864 aaKnown RBP3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 FAM182BQ5T319 152 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 GJD3Q8N144 294 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NANOS1Q8WY41 292 aaKnown RBP3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 EDEM1Q92611 657 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ZCCHC2Q9C0B9 1178 aaKnown RBP3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 DNAJC25Q9H1X3 360 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 RUBCNLQ9H714 662 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 GPAMQ9HCL2 828 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 BRD7Q9NPI1 651 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 GMPR2Q9P2T1 348 aaKnown RBP3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 DACH1Q9UI36 760 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ATXN7L1Q9ULK2 861 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 KCNH4Q9UQ05 1017 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 BCS1LQ9Y276 419 aa3.31□□□□□ -1.88
RNU6-1041P-201ENST00000516254 RBM47A0AV96 593 aaKnown RBP3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 UBAP1LF5GYI3 381 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 LCE2BO14633 110 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 OPLAHO14841 1288 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ZBTB39O15060 712 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TREHO43280 583 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ITGA6P23229 1130 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TYRO3Q06418 890 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 EAPPQ56P03 285 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 SV2AQ7L0J3 742 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TMC7Q7Z402 723 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ZNF280CQ8ND82 737 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 GPR152Q8TDT2 470 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NUDT16Q96DE0 195 aaKnown RBP3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 HSH2DQ96JZ2 352 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 FRMD6Q96NE9 622 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 CCDC87Q9NVE4 849 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 MARK1Q9P0L2 795 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 POLIQ9UNA4 740 aa3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 RTCBQ9Y3I0 505 aaKnown RBP3.3□□□□□ -1.88
RNU6-1041P-201ENST00000516254 EFSO43281 561 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 XYLBO75191 536 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 SNRPBP14678 240 aaKnown RBP3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ATP2B2Q01814 1243 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TNP2Q05952 138 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 FMR1Q06787 632 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 CCINQ13939 588 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 DSC3Q14574 896 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PCSK7Q16549 785 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 DBN1Q16643 649 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 C8orf34Q49A92 452 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ALG1LQ6GMV1 187 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ZNF438Q7Z4V0 828 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NLRP13Q86W25 1043 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ATCAYQ86WG3 371 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NPAS4Q8IUM7 802 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 CMTR1Q8N1G2 835 aaKnown RBP3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 SNX29Q8TEQ0 813 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 FBF1Q8TES7 1133 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 BCL2L13Q9BXK5 485 aa3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 AVENQ9NQS1 362 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NXF1Q9UBU9 619 aaKnown RBP3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NSFL1CQ9UNZ2 370 aaKnown RBP3.29□□□□□ -1.88
RNU6-1041P-201ENST00000516254 SOBPA7XYQ1 873 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 GIPC1O14908 333 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 KHNYNO15037 678 aaKnown RBP3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PPFIA3O75145 1194 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 MAP3K6O95382 1288 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 MAPTP10636 758 aaKnown RBP3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 UBAP2LQ14157 1087 aaKnown RBP3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 TTC39BQ5VTQ0 682 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 SLC16A10Q8TF71 515 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ZNF837Q96EG3 531 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 PNMA5Q96PV4 448 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 ELP3Q9H9T3 547 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 NDFIP2Q9NV92 336 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 KCNMB2Q9Y691 235 aa3.28□□□□□ -1.88
RNU6-1041P-201ENST00000516254 BNIP3LO60238 219 aa3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 CPNE3O75131 537 aaKnown RBP3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 PRPF40AO75400 957 aaKnown RBP3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 IGHA2P01877 340 aa3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 FGFR3P22607 806 aa3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 SOX18P35713 384 aa3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 ENOX2Q16206 610 aaKnown RBP3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 FAM26DQ5JW98 314 aa3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 NPM2Q86SE8 214 aaKnown RBP3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 GTPBP3Q969Y2 492 aaKnown RBP3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 GSX2Q9BZM3 304 aa3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 GGNBP2Q9H3C7 697 aa3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 ABI2Q9NYB9 513 aaPredicted RBP3.27□□□□□ -1.89
RNU6-1041P-201ENST00000516254 DCDC2BA2VCK2 349 aa3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 CDC14CA4D256 554 aa3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 PHF20L1A8MW92 1017 aa3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 E9PSI1 815 aa3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 EIF1AYO14602 144 aaKnown RBP3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 GPR182O15218 404 aa3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 PHACTR2O75167 634 aa3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 TNFRSF21O75509 655 aa3.26□□□□□ -1.89
RNU6-1041P-201ENST00000516254 LDHBP07195 334 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms