RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 ZFAND3Q9H8U3 227 aa6.44□□□□□ -1.38
RNU6-488P-201ENST00000515918 INPP5FQ9Y2H2 1132 aa6.44□□□□□ -1.38
RNU6-488P-201ENST00000515918 ARID5AQ03989 594 aa6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 C4orf17Q53FE4 359 aa6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 MEI1Q5TIA1 1274 aa6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 TMEM214Q6NUQ4 689 aaKnown RBP6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 XKR5Q6UX68 686 aa6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 NOP9Q86U38 636 aaKnown RBP6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 USP48Q86UV5 1035 aa6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 SUSD3Q96L08 255 aa6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 USP20Q9Y2K6 914 aa6.43□□□□□ -1.38
RNU6-488P-201ENST00000515918 TGFBR3LH3BV60 316 aa6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 ZIC2O95409 532 aaPredicted RBP6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 RPLP1P05386 114 aaKnown RBP6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 SLC19A1P41440 591 aa6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 PIF1Q9H611 641 aa6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 ZFYVE28Q9HCC9 887 aa6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 FAM13BQ9NYF5 915 aa6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 GGT7Q9UJ14 662 aa6.42□□□□□ -1.38
RNU6-488P-201ENST00000515918 GIPC1O14908 333 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 PPM1GO15355 546 aaPredicted RBP6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 INPP5BP32019 993 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 PLA2G4AP47712 749 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 TAF1CQ15572 869 aaPredicted RBP6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 TRIP4Q15650 581 aaPredicted RBP6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 ZNF662Q6ZS27 426 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 HS2ST1Q7LGA3 356 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 MCF2L2Q86YR7 1114 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 TTC16Q8NEE8 873 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 RHPN1Q8TCX5 695 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 HSH2DQ96JZ2 352 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 WASF2Q9Y6W5 498 aa6.41□□□□□ -1.38
RNU6-488P-201ENST00000515918 TIMP2P16035 220 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 IDH3AP50213 366 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 IER5Q5VY09 327 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 ERMP1Q7Z2K6 904 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 COPRSQ9NQ92 184 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 ZDHHC3Q9NYG2 299 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 PKD2L1Q9P0L9 805 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 HCSTQ9UBK5 93 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 KCNMB2Q9Y691 235 aa6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 V9GY48 417 aaPredicted RBP6.4□□□□□ -1.38
RNU6-488P-201ENST00000515918 TLDC2A0PJX2 215 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 FGRP09769 529 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 USP17L7P0C7H9 530 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 GRNP28799 593 aaKnown RBP6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 GPC1P35052 558 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 GJA8P48165 433 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 ST13P50502 369 aaKnown RBP6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 RNF144AP50876 292 aaPredicted RBP6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 WDR4P57081 412 aaKnown RBP6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 GNASQ5JWF2 1037 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 SPRYD7Q5W111 196 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 PMFBP1Q8TBY8 1022 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 AIDAQ96BJ3 306 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 CHRDQ9H2X0 955 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 TMEM63CQ9P1W3 806 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 FAM8A1Q9UBU6 413 aa6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 RTCBQ9Y3I0 505 aaKnown RBP6.39□□□□□ -1.39
RNU6-488P-201ENST00000515918 J3QL48 77 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 GTF2E1P29083 439 aaPredicted RBP6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 PHKA2P46019 1235 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 PAK2Q13177 524 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 SLC27A3Q5K4L6 730 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 PDE12Q6L8Q7 609 aaKnown RBP6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 NXPE4Q6UWF7 544 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 SNIP1Q8TAD8 396 aaKnown RBP6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 SNX29Q8TEQ0 813 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 ELP3Q9H9T3 547 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 NPHS2Q9NP85 383 aa6.38□□□□□ -1.39
RNU6-488P-201ENST00000515918 ANKRD62A6NC57 917 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 PHACTR2O75167 634 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 ATF4P18848 351 aaPredicted RBP6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 ATP4AP20648 1035 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 ARSDP51689 593 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 HIF1AQ16665 826 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 NBPF1Q3BBV0 1214 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 BTLAQ7Z6A9 289 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 CDAN1Q8IWY9 1227 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 CMTR1Q8N1G2 835 aaKnown RBP6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 INSM2Q96T92 566 aaPredicted RBP6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 HIRIP3Q9BW71 556 aaPredicted RBP6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 BCO2Q9BYV7 579 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 CNTN3Q9P232 1028 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 TBX22Q9Y458 520 aa6.37□□□□□ -1.39
RNU6-488P-201ENST00000515918 POTECB2RU33 542 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 SPATA31C2B4DYI2 1134 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 UBAP1LF5GYI3 381 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 FOXC1Q12948 553 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 VPS37DQ86XT2 251 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 GALNT12Q8IXK2 581 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 MEIOBQ8N635 442 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 C1orf127Q8N9H9 656 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 ZIC5Q96T25 663 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 ZSWIM4Q9H7M6 989 aa6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 FNDC3AQ9Y2H6 1198 aaKnown RBP6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 TMA7Q9Y2S6 64 aaKnown RBP6.36□□□□□ -1.39
RNU6-488P-201ENST00000515918 GPC6Q9Y625 555 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms