RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 STAG2Q8N3U4 1231 aa8.67□□□□□ -1.02
LINC01088-211ENST00000515597 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
LINC01088-211ENST00000515597 HINFPQ9BQA5 517 aa8.67□□□□□ -1.02
LINC01088-211ENST00000515597 PPP1R12CQ9BZL4 782 aa8.67□□□□□ -1.02
LINC01088-211ENST00000515597 GATA4P43694 442 aa8.66□□□□□ -1.02
LINC01088-211ENST00000515597 PTK7Q13308 1070 aa8.66□□□□□ -1.02
LINC01088-211ENST00000515597 PRRT3Q5FWE3 981 aa8.66□□□□□ -1.02
LINC01088-211ENST00000515597 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L15C9J2P7 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L13C9JLJ4 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L11C9JVI0 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L21D6R901 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L18D6R9N7 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L22D6RA61 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L19D6RCP7 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L20D6RJB6 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 USP17L24Q0WX57 530 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 IGFLR1Q9H665 355 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.02
LINC01088-211ENST00000515597 NID1P14543 1247 aa8.64□□□□□ -1.03
LINC01088-211ENST00000515597 ITGB7P26010 798 aa8.64□□□□□ -1.03
LINC01088-211ENST00000515597 KANK4Q5T7N3 995 aaPredicted RBP8.64□□□□□ -1.03
LINC01088-211ENST00000515597 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
LINC01088-211ENST00000515597 UBE2OQ9C0C9 1292 aaKnown RBP8.64□□□□□ -1.03
LINC01088-211ENST00000515597 BCS1LQ9Y276 419 aa8.64□□□□□ -1.03
LINC01088-211ENST00000515597 APBA3O96018 575 aa8.63□□□□□ -1.03
LINC01088-211ENST00000515597 LMOD1P29536 600 aaPredicted RBP8.63□□□□□ -1.03
LINC01088-211ENST00000515597 HIF1AQ16665 826 aa8.63□□□□□ -1.03
LINC01088-211ENST00000515597 RTN1Q16799 776 aa8.63□□□□□ -1.03
LINC01088-211ENST00000515597 SEMA6BQ9H3T3 888 aa8.63□□□□□ -1.03
LINC01088-211ENST00000515597 SLC6A14Q9UN76 642 aa8.63□□□□□ -1.03
LINC01088-211ENST00000515597 TGFBR3LH3BV60 316 aa8.62□□□□□ -1.03
LINC01088-211ENST00000515597 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
LINC01088-211ENST00000515597 FAM196BA6NMK8 535 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 IGFBP4P22692 258 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
LINC01088-211ENST00000515597 GRIK4Q16099 956 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 IER5Q5VY09 327 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 Q8N3U1 123 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 GSX2Q9BZM3 304 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 NAGPAQ9UK23 515 aa8.61□□□□□ -1.03
LINC01088-211ENST00000515597 A6NJR5 290 aa8.6□□□□□ -1.03
LINC01088-211ENST00000515597 LILRB5O75023 590 aa8.6□□□□□ -1.03
LINC01088-211ENST00000515597 NFKB1P19838 968 aa8.6□□□□□ -1.03
LINC01088-211ENST00000515597 GRNP28799 593 aaKnown RBP8.6□□□□□ -1.03
LINC01088-211ENST00000515597 NUDT8Q8WV74 236 aa8.6□□□□□ -1.03
LINC01088-211ENST00000515597 JPH1Q9HDC5 661 aaPredicted RBP8.6□□□□□ -1.03
LINC01088-211ENST00000515597 DNAJB12Q9NXW2 375 aaKnown RBP8.6□□□□□ -1.03
LINC01088-211ENST00000515597 DMGDHQ9UI17 866 aaKnown RBP8.6□□□□□ -1.03
LINC01088-211ENST00000515597 RSPO4Q2I0M5 234 aaPredicted RBP8.59□□□□□ -1.03
LINC01088-211ENST00000515597 TRAPPC3LQ5T215 181 aa8.59□□□□□ -1.03
LINC01088-211ENST00000515597 PNMA5Q96PV4 448 aa8.59□□□□□ -1.03
LINC01088-211ENST00000515597 VRTNQ9H8Y1 702 aa8.59□□□□□ -1.03
LINC01088-211ENST00000515597 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
LINC01088-211ENST00000515597 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.59□□□□□ -1.03
LINC01088-211ENST00000515597 CCINQ13939 588 aa8.58□□□□□ -1.04
LINC01088-211ENST00000515597 PSAPL1Q6NUJ1 521 aa8.58□□□□□ -1.04
LINC01088-211ENST00000515597 ARXQ96QS3 562 aa8.58□□□□□ -1.04
LINC01088-211ENST00000515597 IDH3AP50213 366 aa8.57□□□□□ -1.04
LINC01088-211ENST00000515597 DGKZQ13574 1117 aa8.57□□□□□ -1.04
LINC01088-211ENST00000515597 KRT25Q7Z3Z0 450 aa8.57□□□□□ -1.04
LINC01088-211ENST00000515597 NACC1Q96RE7 527 aa8.57□□□□□ -1.04
LINC01088-211ENST00000515597 QTRT2Q9H974 415 aaKnown RBP8.57□□□□□ -1.04
LINC01088-211ENST00000515597 A0A0A0MRY4 1105 aa8.56□□□□□ -1.04
LINC01088-211ENST00000515597 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
LINC01088-211ENST00000515597 INPP5BP32019 993 aa8.55□□□□□ -1.04
LINC01088-211ENST00000515597 AFF1P51825 1210 aaKnown RBP8.55□□□□□ -1.04
LINC01088-211ENST00000515597 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
LINC01088-211ENST00000515597 NKAPLQ5M9Q1 402 aa8.55□□□□□ -1.04
LINC01088-211ENST00000515597 SELPP16109 830 aa8.54□□□□□ -1.04
LINC01088-211ENST00000515597 EPB42P16452 691 aa8.54□□□□□ -1.04
LINC01088-211ENST00000515597 WEE1P30291 646 aa8.54□□□□□ -1.04
LINC01088-211ENST00000515597 SHISA2Q6UWI4 295 aa8.54□□□□□ -1.04
LINC01088-211ENST00000515597 EFCC1Q9HA90 598 aa8.54□□□□□ -1.04
LINC01088-211ENST00000515597 ZFATQ9P243 1243 aa8.54□□□□□ -1.04
LINC01088-211ENST00000515597 FOXO3O43524 673 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 DYRK3O43781 588 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 CPB1P15086 417 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 ELNP15502 786 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 ARSDP51689 593 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 RAC1P63000 192 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
LINC01088-211ENST00000515597 ZMYM1Q5SVZ6 1142 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 FAM35AQ86V20 835 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 VTI1AQ96AJ9 217 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
LINC01088-211ENST00000515597 USP20Q9Y2K6 914 aa8.53□□□□□ -1.04
LINC01088-211ENST00000515597 RGS9O75916 674 aaPredicted RBP8.52□□□□□ -1.05
LINC01088-211ENST00000515597 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
LINC01088-211ENST00000515597 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
LINC01088-211ENST00000515597 SASH3O75995 380 aa8.51□□□□□ -1.05
LINC01088-211ENST00000515597 MICAL2O94851 1124 aa8.51□□□□□ -1.05
LINC01088-211ENST00000515597 TARSP26639 723 aaKnown RBP8.51□□□□□ -1.05
LINC01088-211ENST00000515597 PLAURQ03405 335 aa8.51□□□□□ -1.05
LINC01088-211ENST00000515597 ADGRE1Q14246 886 aa8.51□□□□□ -1.05
LINC01088-211ENST00000515597 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms