RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 DEFB115Q30KQ5 88 aa20.91■□□□□ 0.94
LMNA-223ENST00000515459 MAP3K15Q6ZN16 1313 aa20.91■□□□□ 0.94
LMNA-223ENST00000515459 PNISRQ8TF01 805 aaKnown RBP20.91■□□□□ 0.94
LMNA-223ENST00000515459 RPGRQ92834 1020 aaKnown RBP20.91■□□□□ 0.94
LMNA-223ENST00000515459 WBP1LQ9NX94 342 aa20.91■□□□□ 0.94
LMNA-223ENST00000515459 GRIPAP1Q4V328 841 aa20.9■□□□□ 0.94
LMNA-223ENST00000515459 KIF6Q6ZMV9 814 aa20.9■□□□□ 0.94
LMNA-223ENST00000515459 RIC1Q4ADV7 1423 aa20.89■□□□□ 0.94
LMNA-223ENST00000515459 IBTKQ9P2D0 1353 aaPredicted RBP20.89■□□□□ 0.93
LMNA-223ENST00000515459 LMOD1P29536 600 aaPredicted RBP20.89■□□□□ 0.93
LMNA-223ENST00000515459 HOXA10P31260 410 aaPredicted RBP20.89■□□□□ 0.93
LMNA-223ENST00000515459 RRP7AQ9Y3A4 280 aaKnown RBP20.89■□□□□ 0.93
LMNA-223ENST00000515459 GJA3Q9Y6H8 435 aa20.89■□□□□ 0.93
LMNA-223ENST00000515459 ABT1Q9ULW3 272 aaKnown RBP20.88■□□□□ 0.93
LMNA-223ENST00000515459 COL4A5P29400 1685 aa20.88■□□□□ 0.93
LMNA-223ENST00000515459 LTBP1Q14766 1721 aa20.87■□□□□ 0.93
LMNA-223ENST00000515459 MYL6BP14649 208 aa20.87■□□□□ 0.93
LMNA-223ENST00000515459 GPTP24298 496 aa20.87■□□□□ 0.93
LMNA-223ENST00000515459 LBX1P52954 281 aa20.87■□□□□ 0.93
LMNA-223ENST00000515459 TTLL7Q6ZT98 887 aa20.87■□□□□ 0.93
LMNA-223ENST00000515459 DDX21Q9NR30 783 aaKnown RBP eCLIP20.87■□□□□ 0.93
LMNA-223ENST00000515459 UBN2Q6ZU65 1347 aa20.86■□□□□ 0.93
LMNA-223ENST00000515459 WDR33Q9C0J8 1336 aaKnown RBP20.86■□□□□ 0.93
LMNA-223ENST00000515459 EIF4A1P60842 406 aaKnown RBP20.86■□□□□ 0.93
LMNA-223ENST00000515459 MAP2K1Q02750 393 aaPredicted RBP20.86■□□□□ 0.93
LMNA-223ENST00000515459 LARGE2Q8N3Y3 721 aa20.86■□□□□ 0.93
LMNA-223ENST00000515459 RBM17Q96I25 401 aaKnown RBP20.86■□□□□ 0.93
LMNA-223ENST00000515459 CRAMP1Q96RY5 1269 aa20.86■□□□□ 0.93
LMNA-223ENST00000515459 ZBTB3Q9H5J0 574 aa20.86■□□□□ 0.93
LMNA-223ENST00000515459 SUSD4Q5VX71 490 aa20.85■□□□□ 0.93
LMNA-223ENST00000515459 PPEF1O14829 653 aaPredicted RBP20.84■□□□□ 0.93
LMNA-223ENST00000515459 SCNN1DP51172 638 aa20.84■□□□□ 0.93
LMNA-223ENST00000515459 ZNF34Q8IZ26 560 aa20.84■□□□□ 0.93
LMNA-223ENST00000515459 EPS15P42566 896 aa20.83■□□□□ 0.93
LMNA-223ENST00000515459 GIGYF2Q6Y7W6 1299 aaKnown RBP20.83■□□□□ 0.93
LMNA-223ENST00000515459 TRPM7Q96QT4 1865 aa20.83■□□□□ 0.92
LMNA-223ENST00000515459 TCERG1O14776 1098 aaKnown RBP20.82■□□□□ 0.92
LMNA-223ENST00000515459 NTSR2O95665 410 aa20.82■□□□□ 0.92
LMNA-223ENST00000515459 HSPA8P11142 646 aaKnown RBP20.82■□□□□ 0.92
LMNA-223ENST00000515459 USP50Q70EL3 339 aaPredicted RBP20.82■□□□□ 0.92
LMNA-223ENST00000515459 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
LMNA-223ENST00000515459 NIM1KQ8IY84 436 aa20.82■□□□□ 0.92
LMNA-223ENST00000515459 TMX4Q9H1E5 349 aaPredicted RBP20.82■□□□□ 0.92
LMNA-223ENST00000515459 THSD7BQ9C0I4 1608 aa20.82■□□□□ 0.92
LMNA-223ENST00000515459 ERBB4Q15303 1308 aa20.81■□□□□ 0.92
LMNA-223ENST00000515459 NFE2L2Q16236 605 aa20.81■□□□□ 0.92
LMNA-223ENST00000515459 PLEKHF1Q96S99 279 aa20.81■□□□□ 0.92
LMNA-223ENST00000515459 THUMPD2Q9BTF0 503 aaKnown RBP20.81■□□□□ 0.92
LMNA-223ENST00000515459 PPIP5K2O43314 1243 aa20.8■□□□□ 0.92
LMNA-223ENST00000515459 ECE1P42892 770 aa20.8■□□□□ 0.92
LMNA-223ENST00000515459 PARP10Q53GL7 1025 aa20.8■□□□□ 0.92
LMNA-223ENST00000515459 NLRP3Q96P20 1036 aa20.8■□□□□ 0.92
LMNA-223ENST00000515459 FMR1Q06787 632 aaKnown RBP eCLIP20.79■□□□□ 0.922e-8■■■□□ 16.9
LMNA-223ENST00000515459 C3orf67Q6ZVT6 689 aa20.79■□□□□ 0.92
LMNA-223ENST00000515459 PAXIP1Q6ZW49 1069 aaPredicted RBP20.79■□□□□ 0.92
LMNA-223ENST00000515459 SLC51AQ86UW1 340 aa20.79■□□□□ 0.92
LMNA-223ENST00000515459 CAPNS2Q96L46 248 aa20.79■□□□□ 0.92
LMNA-223ENST00000515459 VPS33BQ9H267 617 aa20.79■□□□□ 0.92
LMNA-223ENST00000515459 AOC3Q16853 763 aa20.78■□□□□ 0.92
LMNA-223ENST00000515459 BEGAINQ9BUH8 593 aa20.78■□□□□ 0.92
LMNA-223ENST00000515459 PNNQ9H307 717 aaKnown RBP20.78■□□□□ 0.92
LMNA-223ENST00000515459 ATP6V0A2Q9Y487 856 aa20.78■□□□□ 0.92
LMNA-223ENST00000515459 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
LMNA-223ENST00000515459 SLC10A5Q5PT55 438 aa20.77■□□□□ 0.92
LMNA-223ENST00000515459 CST9Q5W186 159 aa20.77■□□□□ 0.92
LMNA-223ENST00000515459 ABHD8Q96I13 439 aa20.77■□□□□ 0.92
LMNA-223ENST00000515459 GPR101Q96P66 508 aaPredicted RBP20.77■□□□□ 0.92
LMNA-223ENST00000515459 ADARB2Q9NS39 739 aaKnown RBP20.77■□□□□ 0.92
LMNA-223ENST00000515459 GPRC5DQ9NZD1 345 aa20.77■□□□□ 0.92
LMNA-223ENST00000515459 TRAF5O00463 557 aa20.76■□□□□ 0.91
LMNA-223ENST00000515459 GRM1Q13255 1194 aa20.76■□□□□ 0.91
LMNA-223ENST00000515459 CYP4F22Q6NT55 531 aa20.76■□□□□ 0.91
LMNA-223ENST00000515459 SUPT20HQ8NEM7 779 aa20.76■□□□□ 0.91
LMNA-223ENST00000515459 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
LMNA-223ENST00000515459 TLL2Q9Y6L7 1015 aa20.76■□□□□ 0.91
LMNA-223ENST00000515459 LAMB2P55268 1798 aa20.75■□□□□ 0.91
LMNA-223ENST00000515459 ANKRD36CQ5JPF3 1778 aa20.75■□□□□ 0.91
LMNA-223ENST00000515459 TSPYL4Q9UJ04 414 aa20.75■□□□□ 0.91
LMNA-223ENST00000515459 ZNRF3Q9ULT6 936 aa20.75■□□□□ 0.91
LMNA-223ENST00000515459 EIF2S2P20042 333 aaKnown RBP20.74■□□□□ 0.91
LMNA-223ENST00000515459 CXCL9Q07325 125 aa20.74■□□□□ 0.91
LMNA-223ENST00000515459 PDIA6Q15084 440 aa20.74■□□□□ 0.91
LMNA-223ENST00000515459 LRP10Q7Z4F1 713 aa20.74■□□□□ 0.91
LMNA-223ENST00000515459 RTFDC1Q9BY42 306 aaPredicted RBP20.74■□□□□ 0.91
LMNA-223ENST00000515459 ABCC4O15439 1325 aa20.74■□□□□ 0.91
LMNA-223ENST00000515459 BBOX1O75936 387 aa20.73■□□□□ 0.91
LMNA-223ENST00000515459 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
LMNA-223ENST00000515459 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
LMNA-223ENST00000515459 MAP2K2P36507 400 aa20.71■□□□□ 0.91
LMNA-223ENST00000515459 GMPSP49915 693 aaPredicted RBP20.71■□□□□ 0.91
LMNA-223ENST00000515459 HSP90AB3PQ58FF7 597 aa20.71■□□□□ 0.91
LMNA-223ENST00000515459 MPNDQ8N594 471 aa20.71■□□□□ 0.91
LMNA-223ENST00000515459 CELF2O95319 508 aaKnown RBP20.7■□□□□ 0.9
LMNA-223ENST00000515459 ANXA1P04083 346 aa20.7■□□□□ 0.9
LMNA-223ENST00000515459 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.9
LMNA-223ENST00000515459 PROSER3Q2NL68 480 aa20.7■□□□□ 0.9
LMNA-223ENST00000515459 CIAPIN1Q6FI81 312 aa20.7■□□□□ 0.9
LMNA-223ENST00000515459 SAPCD2Q86UD0 394 aa20.7■□□□□ 0.9
LMNA-223ENST00000515459 CDHR2Q9BYE9 1310 aa20.7■□□□□ 0.9
LMNA-223ENST00000515459 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms