RNA–Protein interactions for RNA: ENST00000514023.5

SLC41A3-219, Transcript of solute carrier family 41 member 3, humanhuman

TSL 4

Gene SLC41A3, Length 652 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-219ENST00000514023 HSPA6P17066 643 aa21.47■■□□□ 1.03
SLC41A3-219ENST00000514023 SYNE4Q8N205 404 aa21.47■■□□□ 1.03
SLC41A3-219ENST00000514023 CACNA1SQ13698 1873 aa21.47■■□□□ 1.03
SLC41A3-219ENST00000514023 ARFGEF2Q9Y6D5 1785 aa21.46■■□□□ 1.03
SLC41A3-219ENST00000514023 DBF4Q9UBU7 674 aaPredicted RBP21.46■■□□□ 1.03
SLC41A3-219ENST00000514023 IL16Q14005 1332 aa21.46■■□□□ 1.03
SLC41A3-219ENST00000514023 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
SLC41A3-219ENST00000514023 POTECB2RU33 542 aa21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 PARP10Q53GL7 1025 aa21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 CCDC93Q567U6 631 aa21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 NLRP10Q86W26 655 aa21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 C8orf58Q8NAV2 365 aa21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 TIAM2Q8IVF5 1701 aa21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 SNED1Q8TER0 1413 aa21.45■■□□□ 1.02
SLC41A3-219ENST00000514023 HOXA10P31260 410 aaPredicted RBP21.44■■□□□ 1.02
SLC41A3-219ENST00000514023 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
SLC41A3-219ENST00000514023 ALDH1B1P30837 517 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 TCIRG1Q13488 830 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 SLC10A5Q5PT55 438 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 SOGA3Q5TF21 947 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 PPP1R42Q7Z4L9 355 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 UTP14AQ9BVJ6 771 aaKnown RBP21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 ZNF277Q9NRM2 450 aaPredicted RBP21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 CCDC88AQ3V6T2 1871 aa21.43■■□□□ 1.02
SLC41A3-219ENST00000514023 HSP90AB3PQ58FF7 597 aa21.42■■□□□ 1.02
SLC41A3-219ENST00000514023 WDR63Q8IWG1 891 aa21.42■■□□□ 1.02
SLC41A3-219ENST00000514023 RBM46Q8TBY0 533 aaKnown RBP21.42■■□□□ 1.02
SLC41A3-219ENST00000514023 FKBP4Q02790 459 aaKnown RBP eCLIP21.41■■□□□ 1.02
SLC41A3-219ENST00000514023 RPGRQ92834 1020 aaKnown RBP21.41■■□□□ 1.02
SLC41A3-219ENST00000514023 HCLS1P14317 486 aaPredicted RBP21.4■■□□□ 1.02
SLC41A3-219ENST00000514023 TSPYL6Q8N831 410 aa21.4■■□□□ 1.02
SLC41A3-219ENST00000514023 PLBD2Q8NHP8 589 aa21.4■■□□□ 1.02
SLC41A3-219ENST00000514023 PHAXQ9H814 394 aaKnown RBP21.4■■□□□ 1.02
SLC41A3-219ENST00000514023 ATP5J2-PTCD1G3V325 749 aa21.39■■□□□ 1.01
SLC41A3-219ENST00000514023 TCERG1O14776 1098 aaKnown RBP21.39■■□□□ 1.01
SLC41A3-219ENST00000514023 DDNO94850 711 aaPredicted RBP21.39■■□□□ 1.01
SLC41A3-219ENST00000514023 ANKRD13DQ6ZTN6 518 aa21.39■■□□□ 1.01
SLC41A3-219ENST00000514023 CRAMP1Q96RY5 1269 aa21.39■■□□□ 1.01
SLC41A3-219ENST00000514023 ISCA1Q9BUE6 129 aa21.39■■□□□ 1.01
SLC41A3-219ENST00000514023 VEGFAP15692 232 aaPredicted RBP21.38■■□□□ 1.01
SLC41A3-219ENST00000514023 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
SLC41A3-219ENST00000514023 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
SLC41A3-219ENST00000514023 RTKN2Q8IZC4 609 aa21.38■■□□□ 1.01
SLC41A3-219ENST00000514023 NLRP3Q96P20 1036 aa21.38■■□□□ 1.01
SLC41A3-219ENST00000514023 TRMT112Q9UI30 125 aaKnown RBP21.38■■□□□ 1.01
SLC41A3-219ENST00000514023 RBM17Q96I25 401 aaKnown RBP21.37■■□□□ 1.01
SLC41A3-219ENST00000514023 COL4A5P29400 1685 aa21.37■■□□□ 1.01
SLC41A3-219ENST00000514023 ANKRD36CQ5JPF3 1778 aa21.36■■□□□ 1.01
SLC41A3-219ENST00000514023 ZNF541Q9H0D2 1346 aa21.36■■□□□ 1.01
SLC41A3-219ENST00000514023 DICER1Q9UPY3 1922 aaKnown RBP21.36■■□□□ 1.01
SLC41A3-219ENST00000514023 HTRA3P83110 453 aa21.36■■□□□ 1.01
SLC41A3-219ENST00000514023 DPY19L2Q6NUT2 758 aa21.36■■□□□ 1.01
SLC41A3-219ENST00000514023 ABCC4O15439 1325 aa21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 RNF123Q5XPI4 1314 aa21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 FANCIQ9NVI1 1328 aa21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 CCER2I3L3R5 266 aa21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 PPEF1O14829 653 aaPredicted RBP21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 GOLGA2Q08379 1002 aa21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 TWISTNBQ3B726 338 aaPredicted RBP21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 WDR90Q96KV7 1748 aa21.35■■□□□ 1.01
SLC41A3-219ENST00000514023 SH3TC1Q8TE82 1336 aa21.34■■□□□ 1.01
SLC41A3-219ENST00000514023 IARSP41252 1262 aaKnown RBP21.34■■□□□ 1.01
SLC41A3-219ENST00000514023 FSTL1Q12841 308 aa21.34■■□□□ 1.01
SLC41A3-219ENST00000514023 FAM89AQ96GI7 184 aa21.34■■□□□ 1.01
SLC41A3-219ENST00000514023 PSMD1Q99460 953 aa21.34■■□□□ 1.01
SLC41A3-219ENST00000514023 POTEIP0CG38 1075 aa21.33■■□□□ 1.01
SLC41A3-219ENST00000514023 POTEJP0CG39 1038 aa21.33■■□□□ 1.01
SLC41A3-219ENST00000514023 STK31Q9BXU1 1019 aa21.33■■□□□ 1.01
SLC41A3-219ENST00000514023 APLP1P51693 650 aa21.32■■□□□ 1
SLC41A3-219ENST00000514023 RTL5Q5HYW3 569 aaPredicted RBP21.32■■□□□ 1
SLC41A3-219ENST00000514023 RIC3Q7Z5B4 369 aa21.32■■□□□ 1
SLC41A3-219ENST00000514023 DNAJC5GQ8N7S2 189 aa21.32■■□□□ 1
SLC41A3-219ENST00000514023 MYH16Q9H6N6 1097 aa21.32■■□□□ 1
SLC41A3-219ENST00000514023 CC2D2BQ6DHV5 1058 aa21.31■■□□□ 1
SLC41A3-219ENST00000514023 SMC1BQ8NDV3 1235 aa21.31■■□□□ 1
SLC41A3-219ENST00000514023 ATP6V0A2Q9Y487 856 aa21.31■■□□□ 1
SLC41A3-219ENST00000514023 COL4A1P02462 1669 aa21.31■■□□□ 1
SLC41A3-219ENST00000514023 FZD9O00144 591 aa21.3■■□□□ 1
SLC41A3-219ENST00000514023 DDX58O95786 925 aaKnown RBP21.3■■□□□ 1
SLC41A3-219ENST00000514023 TRIM28Q13263 835 aaKnown RBP21.3■■□□□ 1
SLC41A3-219ENST00000514023 SPINK5Q9NQ38 1064 aaPredicted RBP21.3■■□□□ 1
SLC41A3-219ENST00000514023 LAMB2P55268 1798 aa21.3■■□□□ 1
SLC41A3-219ENST00000514023 EXOSC9Q06265 439 aaKnown RBP21.29■■□□□ 1
SLC41A3-219ENST00000514023 L3MBTL3Q96JM7 780 aaPredicted RBP21.29■■□□□ 1
SLC41A3-219ENST00000514023 MYD88Q99836 296 aa21.29■■□□□ 1
SLC41A3-219ENST00000514023 G2E3Q7L622 706 aa21.28■■□□□ 1
SLC41A3-219ENST00000514023 JARID2Q92833 1246 aaPredicted RBP21.28■■□□□ 1
SLC41A3-219ENST00000514023 ZNF521Q96K83 1311 aa21.28■■□□□ 1
SLC41A3-219ENST00000514023 DDX60Q8IY21 1712 aaKnown RBP21.27■■□□□ 1
SLC41A3-219ENST00000514023 VAMP4O75379 141 aa21.27■■□□□ 1
SLC41A3-219ENST00000514023 GRAPQ13588 217 aa21.27■■□□□ 1
SLC41A3-219ENST00000514023 DDX46Q7L014 1031 aaKnown RBP21.27■■□□□ 1
SLC41A3-219ENST00000514023 GRAPLQ8TC17 118 aaPredicted RBP21.27■■□□□ 1
SLC41A3-219ENST00000514023 BBOX1O75936 387 aa21.26■□□□□ 0.99
SLC41A3-219ENST00000514023 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
SLC41A3-219ENST00000514023 SF3B3Q15393 1217 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms